RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 UNC13BO14795 1591 aa18.47■□□□□ 0.55
TRIM39-207ENST00000428404 PZPP20742 1482 aa18.46■□□□□ 0.55
TRIM39-207ENST00000428404 BCORL1Q5H9F3 1711 aa18.46■□□□□ 0.55
TRIM39-207ENST00000428404 AGLP35573 1532 aa18.46■□□□□ 0.55
TRIM39-207ENST00000428404 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
TRIM39-207ENST00000428404 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
TRIM39-207ENST00000428404 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
TRIM39-207ENST00000428404 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
TRIM39-207ENST00000428404 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
TRIM39-207ENST00000428404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM39-207ENST00000428404 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
TRIM39-207ENST00000428404 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
TRIM39-207ENST00000428404 VWDEQ8N2E2 1590 aa18.42■□□□□ 0.54
TRIM39-207ENST00000428404 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
TRIM39-207ENST00000428404 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.54
TRIM39-207ENST00000428404 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
TRIM39-207ENST00000428404 KANK1Q14678 1352 aa18.39■□□□□ 0.53
TRIM39-207ENST00000428404 SIGLEC1Q9BZZ2 1709 aa18.38■□□□□ 0.53
TRIM39-207ENST00000428404 GGT6Q6P531 493 aa18.38■□□□□ 0.53
TRIM39-207ENST00000428404 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
TRIM39-207ENST00000428404 PKD2Q13563 968 aa18.37■□□□□ 0.53
TRIM39-207ENST00000428404 LMTK2Q8IWU2 1503 aa18.36■□□□□ 0.53
TRIM39-207ENST00000428404 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.53
TRIM39-207ENST00000428404 FOXD1Q16676 465 aa18.33■□□□□ 0.52
TRIM39-207ENST00000428404 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
TRIM39-207ENST00000428404 ABCC3O15438 1527 aa18.32■□□□□ 0.52
TRIM39-207ENST00000428404 ARID4BQ4LE39 1312 aaPredicted RBP18.3■□□□□ 0.52
TRIM39-207ENST00000428404 TET3O43151 1660 aa18.29■□□□□ 0.52
TRIM39-207ENST00000428404 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.52
TRIM39-207ENST00000428404 EFCAB6Q5THR3 1501 aa18.27■□□□□ 0.51
TRIM39-207ENST00000428404 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
TRIM39-207ENST00000428404 MLECQ14165 292 aa18.26■□□□□ 0.51
TRIM39-207ENST00000428404 PTPRTO14522 1441 aa18.25■□□□□ 0.51
TRIM39-207ENST00000428404 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
TRIM39-207ENST00000428404 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
TRIM39-207ENST00000428404 CEP152O94986 1710 aa18.24■□□□□ 0.51
TRIM39-207ENST00000428404 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
TRIM39-207ENST00000428404 E9PCH4 1651 aa18.24■□□□□ 0.51
TRIM39-207ENST00000428404 NPATQ14207 1427 aa18.23■□□□□ 0.51
TRIM39-207ENST00000428404 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
TRIM39-207ENST00000428404 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.51
TRIM39-207ENST00000428404 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
TRIM39-207ENST00000428404 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
TRIM39-207ENST00000428404 NOS1P29475 1434 aa18.18■□□□□ 0.5
TRIM39-207ENST00000428404 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
TRIM39-207ENST00000428404 ESF1Q9H501 851 aaKnown RBP18.18■□□□□ 0.5
TRIM39-207ENST00000428404 TIMELESSQ9UNS1 1208 aa18.18■□□□□ 0.5
TRIM39-207ENST00000428404 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
TRIM39-207ENST00000428404 TRPM2O94759 1503 aa18.16■□□□□ 0.5
TRIM39-207ENST00000428404 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
TRIM39-207ENST00000428404 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
TRIM39-207ENST00000428404 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
TRIM39-207ENST00000428404 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
TRIM39-207ENST00000428404 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
TRIM39-207ENST00000428404 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
TRIM39-207ENST00000428404 SLC52A1Q9NWF4 448 aa18.1■□□□□ 0.49
TRIM39-207ENST00000428404 SYNMO15061 1565 aa18.09■□□□□ 0.49
TRIM39-207ENST00000428404 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
TRIM39-207ENST00000428404 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
TRIM39-207ENST00000428404 PREX1Q8TCU6 1659 aa18.09■□□□□ 0.49
TRIM39-207ENST00000428404 CLTCL1P53675 1640 aa18.09■□□□□ 0.49
TRIM39-207ENST00000428404 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
TRIM39-207ENST00000428404 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.48
TRIM39-207ENST00000428404 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
TRIM39-207ENST00000428404 IDI1Q13907 227 aa18.07■□□□□ 0.48
TRIM39-207ENST00000428404 L3MBTL2Q969R5 705 aa18.07■□□□□ 0.48
TRIM39-207ENST00000428404 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
TRIM39-207ENST00000428404 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
TRIM39-207ENST00000428404 UGGT1Q9NYU2 1555 aa18.06■□□□□ 0.48
TRIM39-207ENST00000428404 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-207ENST00000428404 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
TRIM39-207ENST00000428404 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
TRIM39-207ENST00000428404 C3P01024 1663 aa18.03■□□□□ 0.48
TRIM39-207ENST00000428404 TNRQ92752 1358 aa18.03■□□□□ 0.48
TRIM39-207ENST00000428404 RIMS1Q86UR5 1692 aaKnown RBP18.01■□□□□ 0.47
TRIM39-207ENST00000428404 RGL3Q3MIN7 710 aa18■□□□□ 0.47
TRIM39-207ENST00000428404 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
TRIM39-207ENST00000428404 KDM4FA0A1W2PPD8 638 aa17.98■□□□□ 0.47
TRIM39-207ENST00000428404 PTPRMP28827 1452 aa17.98■□□□□ 0.47
TRIM39-207ENST00000428404 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
TRIM39-207ENST00000428404 NLRP1Q9C000 1473 aa17.96■□□□□ 0.47
TRIM39-207ENST00000428404 KIF1BO60333 1816 aa17.96■□□□□ 0.47
TRIM39-207ENST00000428404 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
TRIM39-207ENST00000428404 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
TRIM39-207ENST00000428404 TMEM131LA2VDJ0 1609 aa17.95■□□□□ 0.46
TRIM39-207ENST00000428404 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
TRIM39-207ENST00000428404 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
TRIM39-207ENST00000428404 A2ML1A8K2U0 1454 aa17.94■□□□□ 0.46
TRIM39-207ENST00000428404 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
TRIM39-207ENST00000428404 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
TRIM39-207ENST00000428404 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
TRIM39-207ENST00000428404 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
TRIM39-207ENST00000428404 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
TRIM39-207ENST00000428404 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
TRIM39-207ENST00000428404 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
TRIM39-207ENST00000428404 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
TRIM39-207ENST00000428404 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
TRIM39-207ENST00000428404 MYOM2P54296 1465 aa17.88■□□□□ 0.45
TRIM39-207ENST00000428404 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
TRIM39-207ENST00000428404 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms