RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
TVP23C-203ENST00000428082 TRIM52Q96A61 297 aa22.61■■□□□ 1.21
TVP23C-203ENST00000428082 ARHGEF40Q8TER5 1519 aa22.59■■□□□ 1.21
TVP23C-203ENST00000428082 EIF2AK4Q9P2K8 1649 aaKnown RBP22.59■■□□□ 1.21
TVP23C-203ENST00000428082 ATP10AO60312 1499 aa22.58■■□□□ 1.21
TVP23C-203ENST00000428082 MIER1Q8N108 512 aa22.58■■□□□ 1.21
TVP23C-203ENST00000428082 UNC13BO14795 1591 aa22.57■■□□□ 1.2
TVP23C-203ENST00000428082 KIF3BO15066 747 aa22.56■■□□□ 1.2
TVP23C-203ENST00000428082 NUP155O75694 1391 aa22.53■■□□□ 1.2
TVP23C-203ENST00000428082 DEPDC5O75140 1603 aa22.53■■□□□ 1.2
TVP23C-203ENST00000428082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.21e-7■□□□□ 8.3
TVP23C-203ENST00000428082 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
TVP23C-203ENST00000428082 BCORL1Q5H9F3 1711 aa22.52■■□□□ 1.2
TVP23C-203ENST00000428082 SIGLEC1Q9BZZ2 1709 aa22.52■■□□□ 1.2
TVP23C-203ENST00000428082 PZPP20742 1482 aa22.52■■□□□ 1.2
TVP23C-203ENST00000428082 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
TVP23C-203ENST00000428082 MROH1Q8NDA8 1641 aa22.5■■□□□ 1.19
TVP23C-203ENST00000428082 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
TVP23C-203ENST00000428082 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
TVP23C-203ENST00000428082 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
TVP23C-203ENST00000428082 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
TVP23C-203ENST00000428082 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
TVP23C-203ENST00000428082 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
TVP23C-203ENST00000428082 PRDM15P57071 1507 aaPredicted RBP22.47■■□□□ 1.19
TVP23C-203ENST00000428082 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
TVP23C-203ENST00000428082 AGLP35573 1532 aa22.46■■□□□ 1.19
TVP23C-203ENST00000428082 GGT6Q6P531 493 aa22.45■■□□□ 1.18
TVP23C-203ENST00000428082 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
TVP23C-203ENST00000428082 FOXD1Q16676 465 aa22.41■■□□□ 1.18
TVP23C-203ENST00000428082 KANK1Q14678 1352 aa22.41■■□□□ 1.18
TVP23C-203ENST00000428082 PKD2Q13563 968 aa22.4■■□□□ 1.18
TVP23C-203ENST00000428082 CEP152O94986 1710 aa22.4■■□□□ 1.18
TVP23C-203ENST00000428082 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.18
TVP23C-203ENST00000428082 TET3O43151 1660 aa22.36■■□□□ 1.17
TVP23C-203ENST00000428082 ARID4BQ4LE39 1312 aaPredicted RBP22.36■■□□□ 1.17
TVP23C-203ENST00000428082 MLECQ14165 292 aa22.35■■□□□ 1.17
TVP23C-203ENST00000428082 ABCC3O15438 1527 aa22.34■■□□□ 1.17
TVP23C-203ENST00000428082 LMTK2Q8IWU2 1503 aa22.34■■□□□ 1.17
TVP23C-203ENST00000428082 E9PCH4 1651 aa22.34■■□□□ 1.17
TVP23C-203ENST00000428082 WASHC2CQ9Y4E1 1318 aa22.34■■□□□ 1.17
TVP23C-203ENST00000428082 ZC3H13Q5T200 1668 aaKnown RBP22.32■■□□□ 1.16
TVP23C-203ENST00000428082 ANKRD30BQ9BXX2 1392 aa22.31■■□□□ 1.16
TVP23C-203ENST00000428082 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
TVP23C-203ENST00000428082 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
TVP23C-203ENST00000428082 CAMSAP1Q5T5Y3 1602 aa22.3■■□□□ 1.16
TVP23C-203ENST00000428082 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
TVP23C-203ENST00000428082 CLTCQ00610 1675 aaKnown RBP22.27■■□□□ 1.16
TVP23C-203ENST00000428082 CFAP65Q6ZU64 1925 aaKnown RBP22.25■■□□□ 1.15
TVP23C-203ENST00000428082 NPATQ14207 1427 aa22.24■■□□□ 1.15
TVP23C-203ENST00000428082 PLA2R1Q13018 1463 aa22.24■■□□□ 1.15
TVP23C-203ENST00000428082 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
TVP23C-203ENST00000428082 RPRD2Q5VT52 1461 aaKnown RBP22.21■■□□□ 1.15
TVP23C-203ENST00000428082 ARHGAP31Q2M1Z3 1444 aa22.21■■□□□ 1.15
TVP23C-203ENST00000428082 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
TVP23C-203ENST00000428082 PTPRTO14522 1441 aa22.19■■□□□ 1.14
TVP23C-203ENST00000428082 FER1L4A9Z1Z3 1794 aa22.18■■□□□ 1.14
TVP23C-203ENST00000428082 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
TVP23C-203ENST00000428082 TRPM2O94759 1503 aa22.17■■□□□ 1.14
TVP23C-203ENST00000428082 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
TVP23C-203ENST00000428082 PREX1Q8TCU6 1659 aa22.15■■□□□ 1.14
TVP23C-203ENST00000428082 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
TVP23C-203ENST00000428082 TONSLQ96HA7 1378 aa22.15■■□□□ 1.14
TVP23C-203ENST00000428082 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
TVP23C-203ENST00000428082 MROH2AA6NES4 1674 aa22.14■■□□□ 1.14
TVP23C-203ENST00000428082 NOS1P29475 1434 aa22.13■■□□□ 1.13
TVP23C-203ENST00000428082 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
TVP23C-203ENST00000428082 MADDQ8WXG6 1647 aa22.13■■□□□ 1.13
TVP23C-203ENST00000428082 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
TVP23C-203ENST00000428082 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
TVP23C-203ENST00000428082 FBXO31Q5XUX0 539 aaPredicted RBP22.12■■□□□ 1.13
TVP23C-203ENST00000428082 SYNMO15061 1565 aa22.11■■□□□ 1.13
TVP23C-203ENST00000428082 ERVK-7P63135 1459 aa22.1■■□□□ 1.13
TVP23C-203ENST00000428082 RIMS1Q86UR5 1692 aaKnown RBP22.09■■□□□ 1.13
TVP23C-203ENST00000428082 C3P01024 1663 aa22.08■■□□□ 1.13
TVP23C-203ENST00000428082 SPATA31D1Q6ZQQ2 1576 aa22.07■■□□□ 1.12
TVP23C-203ENST00000428082 CEBPAP49715 358 aaPredicted RBP22.06■■□□□ 1.12
TVP23C-203ENST00000428082 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
TVP23C-203ENST00000428082 L3MBTL2Q969R5 705 aa22.04■■□□□ 1.12
TVP23C-203ENST00000428082 KIF1BO60333 1816 aa22.04■■□□□ 1.12
TVP23C-203ENST00000428082 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.11
TVP23C-203ENST00000428082 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
TVP23C-203ENST00000428082 IDI1Q13907 227 aa22■■□□□ 1.11
TVP23C-203ENST00000428082 RGL3Q3MIN7 710 aa22■■□□□ 1.11
TVP23C-203ENST00000428082 SLC52A1Q9NWF4 448 aa22■■□□□ 1.11
TVP23C-203ENST00000428082 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
TVP23C-203ENST00000428082 TNRQ92752 1358 aa21.97■■□□□ 1.11
TVP23C-203ENST00000428082 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
TVP23C-203ENST00000428082 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
TVP23C-203ENST00000428082 NEURL4Q96JN8 1562 aa21.96■■□□□ 1.11
TVP23C-203ENST00000428082 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
TVP23C-203ENST00000428082 MYO5BQ9ULV0 1848 aa21.94■■□□□ 1.1
TVP23C-203ENST00000428082 DCAF11Q8TEB1 546 aa21.94■■□□□ 1.1
TVP23C-203ENST00000428082 TMEM131LA2VDJ0 1609 aa21.93■■□□□ 1.1
TVP23C-203ENST00000428082 PTPRMP28827 1452 aa21.92■■□□□ 1.1
TVP23C-203ENST00000428082 ANP32CO43423 234 aa21.91■■□□□ 1.1
TVP23C-203ENST00000428082 KDM2AQ9Y2K7 1162 aa21.91■■□□□ 1.1
TVP23C-203ENST00000428082 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
TVP23C-203ENST00000428082 KDM4FA0A1W2PPD8 638 aa21.88■■□□□ 1.09
TVP23C-203ENST00000428082 IFT172Q9UG01 1749 aa21.88■■□□□ 1.09
TVP23C-203ENST00000428082 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms