RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 EIF2AK4Q9P2K8 1649 aaKnown RBP25.71■■□□□ 1.71
VRK2-204ENST00000428021 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.71
VRK2-204ENST00000428021 NCOA1Q15788 1441 aa25.7■■□□□ 1.7
VRK2-204ENST00000428021 PREX1Q8TCU6 1659 aa25.69■■□□□ 1.7
VRK2-204ENST00000428021 ANKRD30AQ9BXX3 1397 aa25.69■■□□□ 1.7
VRK2-204ENST00000428021 ADGRL2O95490 1459 aa25.68■■□□□ 1.7
VRK2-204ENST00000428021 PTPRKQ15262 1439 aa25.68■■□□□ 1.7
VRK2-204ENST00000428021 FAM135AQ9P2D6 1515 aa25.67■■□□□ 1.7
VRK2-204ENST00000428021 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
VRK2-204ENST00000428021 MROH1Q8NDA8 1641 aa25.66■■□□□ 1.7
VRK2-204ENST00000428021 NPATQ14207 1427 aa25.65■■□□□ 1.7
VRK2-204ENST00000428021 ERBINQ96RT1 1412 aa25.65■■□□□ 1.7
VRK2-204ENST00000428021 HSPA2P54652 639 aa25.65■■□□□ 1.7
VRK2-204ENST00000428021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.64■■□□□ 1.69
VRK2-204ENST00000428021 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
VRK2-204ENST00000428021 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
VRK2-204ENST00000428021 ABCC3O15438 1527 aa25.59■■□□□ 1.69
VRK2-204ENST00000428021 RRBP1Q9P2E9 1410 aaKnown RBP25.59■■□□□ 1.69
VRK2-204ENST00000428021 DEPDC5O75140 1603 aa25.56■■□□□ 1.68
VRK2-204ENST00000428021 ZC3H13Q5T200 1668 aaKnown RBP25.56■■□□□ 1.68
VRK2-204ENST00000428021 PZPP20742 1482 aa25.56■■□□□ 1.68
VRK2-204ENST00000428021 PRDM15P57071 1507 aaPredicted RBP25.56■■□□□ 1.68
VRK2-204ENST00000428021 FBXO31Q5XUX0 539 aaPredicted RBP25.55■■□□□ 1.68
VRK2-204ENST00000428021 ROCK1Q13464 1354 aa25.54■■□□□ 1.68
VRK2-204ENST00000428021 ITGAEP38570 1179 aa25.53■■□□□ 1.68
VRK2-204ENST00000428021 CEP152O94986 1710 aa25.53■■□□□ 1.68
VRK2-204ENST00000428021 ANKRD50Q9ULJ7 1429 aa25.52■■□□□ 1.68
VRK2-204ENST00000428021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
VRK2-204ENST00000428021 MYO3AQ8NEV4 1616 aa25.51■■□□□ 1.67
VRK2-204ENST00000428021 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
VRK2-204ENST00000428021 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
VRK2-204ENST00000428021 TNRQ92752 1358 aa25.47■■□□□ 1.67
VRK2-204ENST00000428021 ZNF142P52746 1687 aaPredicted RBP25.47■■□□□ 1.67
VRK2-204ENST00000428021 STRCQ7RTU9 1775 aa25.46■■□□□ 1.67
VRK2-204ENST00000428021 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
VRK2-204ENST00000428021 KANK1Q14678 1352 aa25.44■■□□□ 1.66
VRK2-204ENST00000428021 LMTK2Q8IWU2 1503 aa25.43■■□□□ 1.66
VRK2-204ENST00000428021 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
VRK2-204ENST00000428021 SPATA31D1Q6ZQQ2 1576 aa25.43■■□□□ 1.66
VRK2-204ENST00000428021 ERVK-7P63135 1459 aa25.42■■□□□ 1.66
VRK2-204ENST00000428021 CFAP65Q6ZU64 1925 aaKnown RBP25.41■■□□□ 1.66
VRK2-204ENST00000428021 A2ML1A8K2U0 1454 aa25.41■■□□□ 1.66
VRK2-204ENST00000428021 UNC13BO14795 1591 aa25.38■■□□□ 1.65
VRK2-204ENST00000428021 NLRP1Q9C000 1473 aa25.36■■□□□ 1.65
VRK2-204ENST00000428021 EFCAB6Q5THR3 1501 aa25.34■■□□□ 1.65
VRK2-204ENST00000428021 PLA2R1Q13018 1463 aa25.33■■□□□ 1.65
VRK2-204ENST00000428021 NAIPQ13075 1403 aa25.31■■□□□ 1.64
VRK2-204ENST00000428021 DMRT2Q9Y5R5 561 aa25.31■■□□□ 1.64
VRK2-204ENST00000428021 NCKAP5LQ9HCH0 1330 aa25.3■■□□□ 1.64
VRK2-204ENST00000428021 TET3O43151 1660 aa25.29■■□□□ 1.64
VRK2-204ENST00000428021 PTPRTO14522 1441 aa25.29■■□□□ 1.64
VRK2-204ENST00000428021 UGGT1Q9NYU2 1555 aa25.28■■□□□ 1.64
VRK2-204ENST00000428021 IQGAP3Q86VI3 1631 aa25.27■■□□□ 1.64
VRK2-204ENST00000428021 NOS1P29475 1434 aa25.27■■□□□ 1.64
VRK2-204ENST00000428021 GCC2Q8IWJ2 1684 aa25.26■■□□□ 1.63
VRK2-204ENST00000428021 PKD2Q13563 968 aa25.26■■□□□ 1.63
VRK2-204ENST00000428021 THEMISQ8N1K5 641 aaPredicted RBP25.26■■□□□ 1.63
VRK2-204ENST00000428021 NUP155O75694 1391 aa25.26■■□□□ 1.63
VRK2-204ENST00000428021 HFM1A2PYH4 1435 aa25.25■■□□□ 1.63
VRK2-204ENST00000428021 RPRD2Q5VT52 1461 aaKnown RBP25.25■■□□□ 1.63
VRK2-204ENST00000428021 SYNMO15061 1565 aa25.24■■□□□ 1.63
VRK2-204ENST00000428021 UBR1Q8IWV7 1749 aa25.22■■□□□ 1.63
VRK2-204ENST00000428021 E9PCH4 1651 aa25.21■■□□□ 1.63
VRK2-204ENST00000428021 IDI1Q13907 227 aa25.2■■□□□ 1.62
VRK2-204ENST00000428021 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
VRK2-204ENST00000428021 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
VRK2-204ENST00000428021 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
VRK2-204ENST00000428021 ANKLE2Q86XL3 938 aa25.17■■□□□ 1.62
VRK2-204ENST00000428021 SLC52A1Q9NWF4 448 aa25.14■■□□□ 1.62
VRK2-204ENST00000428021 KDM5AP29375 1690 aaKnown RBP25.13■■□□□ 1.61
VRK2-204ENST00000428021 ARHGAP23Q9P227 1491 aa25.13■■□□□ 1.61
VRK2-204ENST00000428021 SLIT1O75093 1534 aa25.12■■□□□ 1.61
VRK2-204ENST00000428021 MED14O60244 1454 aa25.12■■□□□ 1.61
VRK2-204ENST00000428021 LTBP4Q8N2S1 1624 aa25.09■■□□□ 1.61
VRK2-204ENST00000428021 TMEM2Q9UHN6 1383 aa25.08■■□□□ 1.61
VRK2-204ENST00000428021 ADGRB3O60242 1522 aa25.08■■□□□ 1.61
VRK2-204ENST00000428021 LTKP29376 864 aa25.08■■□□□ 1.61
VRK2-204ENST00000428021 CERKQ8TCT0 537 aa25.08■■□□□ 1.61
VRK2-204ENST00000428021 STAG3Q9UJ98 1225 aa25.08■■□□□ 1.61
VRK2-204ENST00000428021 NPHP4O75161 1426 aaPredicted RBP25.08■■□□□ 1.61
VRK2-204ENST00000428021 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
VRK2-204ENST00000428021 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
VRK2-204ENST00000428021 ZNF335Q9H4Z2 1342 aaPredicted RBP25.06■■□□□ 1.6
VRK2-204ENST00000428021 ILDR1Q86SU0 546 aaPredicted RBP25.05■■□□□ 1.6
VRK2-204ENST00000428021 TXNDC2Q86VQ3 553 aa25.05■■□□□ 1.6
VRK2-204ENST00000428021 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
VRK2-204ENST00000428021 MYO5BQ9ULV0 1848 aa25.03■■□□□ 1.6
VRK2-204ENST00000428021 TMEM131LA2VDJ0 1609 aa25.03■■□□□ 1.6
VRK2-204ENST00000428021 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
VRK2-204ENST00000428021 EID1Q9Y6B2 187 aa25■■□□□ 1.59
VRK2-204ENST00000428021 SETD5Q9C0A6 1442 aa25■■□□□ 1.59
VRK2-204ENST00000428021 FBXO41Q8TF61 875 aa24.99■■□□□ 1.59
VRK2-204ENST00000428021 SLC4A1APQ9BWU0 796 aaKnown RBP24.99■■□□□ 1.59
VRK2-204ENST00000428021 ZFYVE9O95405 1425 aa24.96■■□□□ 1.59
VRK2-204ENST00000428021 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
VRK2-204ENST00000428021 TRPM2O94759 1503 aa24.95■■□□□ 1.58
VRK2-204ENST00000428021 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
VRK2-204ENST00000428021 CLTCL1P53675 1640 aa24.92■■□□□ 1.58
VRK2-204ENST00000428021 RAB3GAP2Q9H2M9 1393 aa24.92■■□□□ 1.58
VRK2-204ENST00000428021 MPHOSPH9Q99550 1183 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms