RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 WASHC2CQ9Y4E1 1318 aa22.63■■□□□ 1.21
VARS2-203ENST00000428017 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
VARS2-203ENST00000428017 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
VARS2-203ENST00000428017 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
VARS2-203ENST00000428017 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
VARS2-203ENST00000428017 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
VARS2-203ENST00000428017 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.21
VARS2-203ENST00000428017 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
VARS2-203ENST00000428017 MADDQ8WXG6 1647 aa22.57■■□□□ 1.2
VARS2-203ENST00000428017 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
VARS2-203ENST00000428017 FAM135AQ9P2D6 1515 aa22.57■■□□□ 1.2
VARS2-203ENST00000428017 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
VARS2-203ENST00000428017 PRDM15P57071 1507 aaPredicted RBP22.56■■□□□ 1.2
VARS2-203ENST00000428017 NUP155O75694 1391 aa22.55■■□□□ 1.2
VARS2-203ENST00000428017 FER1L4A9Z1Z3 1794 aa22.54■■□□□ 1.2
VARS2-203ENST00000428017 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
VARS2-203ENST00000428017 DEPDC5O75140 1603 aa22.53■■□□□ 1.2
VARS2-203ENST00000428017 MROH1Q8NDA8 1641 aa22.53■■□□□ 1.2
VARS2-203ENST00000428017 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
VARS2-203ENST00000428017 UNC13BO14795 1591 aa22.52■■□□□ 1.2
VARS2-203ENST00000428017 ABCC3O15438 1527 aa22.52■■□□□ 1.19
VARS2-203ENST00000428017 RIMS1Q86UR5 1692 aaKnown RBP22.51■■□□□ 1.19
VARS2-203ENST00000428017 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
VARS2-203ENST00000428017 PTPRMP28827 1452 aa22.5■■□□□ 1.19
VARS2-203ENST00000428017 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
VARS2-203ENST00000428017 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
VARS2-203ENST00000428017 ZC3H13Q5T200 1668 aaKnown RBP22.49■■□□□ 1.19
VARS2-203ENST00000428017 HRCP23327 699 aa22.47■■□□□ 1.19
VARS2-203ENST00000428017 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
VARS2-203ENST00000428017 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
VARS2-203ENST00000428017 LMTK2Q8IWU2 1503 aa22.45■■□□□ 1.18
VARS2-203ENST00000428017 MROH2AA6NES4 1674 aa22.44■■□□□ 1.18
VARS2-203ENST00000428017 SLC4A1APQ9BWU0 796 aaKnown RBP22.44■■□□□ 1.18
VARS2-203ENST00000428017 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
VARS2-203ENST00000428017 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
VARS2-203ENST00000428017 CEP152O94986 1710 aa22.42■■□□□ 1.18
VARS2-203ENST00000428017 PZPP20742 1482 aa22.41■■□□□ 1.18
VARS2-203ENST00000428017 CAMSAP1Q5T5Y3 1602 aa22.41■■□□□ 1.18
VARS2-203ENST00000428017 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
VARS2-203ENST00000428017 EFCAB6Q5THR3 1501 aa22.39■■□□□ 1.17
VARS2-203ENST00000428017 FBXO31Q5XUX0 539 aaPredicted RBP22.38■■□□□ 1.17
VARS2-203ENST00000428017 TET3O43151 1660 aa22.38■■□□□ 1.17
VARS2-203ENST00000428017 NPATQ14207 1427 aa22.38■■□□□ 1.17
VARS2-203ENST00000428017 C3P01024 1663 aa22.37■■□□□ 1.17
VARS2-203ENST00000428017 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
VARS2-203ENST00000428017 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
VARS2-203ENST00000428017 PKD2Q13563 968 aa22.36■■□□□ 1.17
VARS2-203ENST00000428017 TNRQ92752 1358 aa22.34■■□□□ 1.17
VARS2-203ENST00000428017 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
VARS2-203ENST00000428017 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
VARS2-203ENST00000428017 E9PCH4 1651 aa22.27■■□□□ 1.16
VARS2-203ENST00000428017 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
VARS2-203ENST00000428017 NOS1P29475 1434 aa22.26■■□□□ 1.15
VARS2-203ENST00000428017 FOXD1Q16676 465 aa22.26■■□□□ 1.15
VARS2-203ENST00000428017 SLC52A1Q9NWF4 448 aa22.25■■□□□ 1.15
VARS2-203ENST00000428017 PREX1Q8TCU6 1659 aa22.25■■□□□ 1.15
VARS2-203ENST00000428017 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
VARS2-203ENST00000428017 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
VARS2-203ENST00000428017 PTPRTO14522 1441 aa22.21■■□□□ 1.15
VARS2-203ENST00000428017 MYO3AQ8NEV4 1616 aa22.18■■□□□ 1.14
VARS2-203ENST00000428017 SYNMO15061 1565 aa22.18■■□□□ 1.14
VARS2-203ENST00000428017 A2ML1A8K2U0 1454 aa22.18■■□□□ 1.14
VARS2-203ENST00000428017 IDI1Q13907 227 aa22.18■■□□□ 1.14
VARS2-203ENST00000428017 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
VARS2-203ENST00000428017 SETD1BQ9UPS6 1966 aaKnown RBP22.17■■□□□ 1.14
VARS2-203ENST00000428017 CFAP65Q6ZU64 1925 aaKnown RBP22.17■■□□□ 1.14
VARS2-203ENST00000428017 TRPM2O94759 1503 aa22.16■■□□□ 1.14
VARS2-203ENST00000428017 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
VARS2-203ENST00000428017 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
VARS2-203ENST00000428017 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
VARS2-203ENST00000428017 SPHKAPQ2M3C7 1700 aa22.15■■□□□ 1.14
VARS2-203ENST00000428017 PLA2R1Q13018 1463 aa22.15■■□□□ 1.14
VARS2-203ENST00000428017 LMTK3Q96Q04 1460 aa22.15■■□□□ 1.14
VARS2-203ENST00000428017 THEMISQ8N1K5 641 aaPredicted RBP22.14■■□□□ 1.13
VARS2-203ENST00000428017 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
VARS2-203ENST00000428017 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
VARS2-203ENST00000428017 HSPA2P54652 639 aa22.11■■□□□ 1.13
VARS2-203ENST00000428017 ZNF142P52746 1687 aaPredicted RBP22.09■■□□□ 1.13
VARS2-203ENST00000428017 PIK3C2BO00750 1634 aa22.09■■□□□ 1.13
VARS2-203ENST00000428017 ADGRB3O60242 1522 aa22.08■■□□□ 1.13
VARS2-203ENST00000428017 CLTCL1P53675 1640 aa22.07■■□□□ 1.12
VARS2-203ENST00000428017 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
VARS2-203ENST00000428017 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
VARS2-203ENST00000428017 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
VARS2-203ENST00000428017 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
VARS2-203ENST00000428017 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
VARS2-203ENST00000428017 ANKLE2Q86XL3 938 aa22.02■■□□□ 1.12
VARS2-203ENST00000428017 UBR1Q8IWV7 1749 aa22.02■■□□□ 1.12
VARS2-203ENST00000428017 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
VARS2-203ENST00000428017 KDM5AP29375 1690 aaKnown RBP22.01■■□□□ 1.11
VARS2-203ENST00000428017 TMEM131LA2VDJ0 1609 aa22■■□□□ 1.11
VARS2-203ENST00000428017 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
VARS2-203ENST00000428017 TXNDC2Q86VQ3 553 aa21.99■■□□□ 1.11
VARS2-203ENST00000428017 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
VARS2-203ENST00000428017 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
VARS2-203ENST00000428017 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
VARS2-203ENST00000428017 RPGRIP1LQ68CZ1 1315 aa21.97■■□□□ 1.11
VARS2-203ENST00000428017 KIF1BO60333 1816 aa21.96■■□□□ 1.11
VARS2-203ENST00000428017 SLIT1O75093 1534 aa21.96■■□□□ 1.11
VARS2-203ENST00000428017 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms