RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
SMARCAL1-206ENST00000427645 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
SMARCAL1-206ENST00000427645 SETD1BQ9UPS6 1966 aaKnown RBP12.38□□□□□ -0.43
SMARCAL1-206ENST00000427645 A2MP01023 1474 aa12.38□□□□□ -0.43
SMARCAL1-206ENST00000427645 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
SMARCAL1-206ENST00000427645 NPATQ14207 1427 aa12.37□□□□□ -0.43
SMARCAL1-206ENST00000427645 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-206ENST00000427645 ITGAEP38570 1179 aa12.36□□□□□ -0.43
SMARCAL1-206ENST00000427645 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
SMARCAL1-206ENST00000427645 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-206ENST00000427645 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
SMARCAL1-206ENST00000427645 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-206ENST00000427645 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-206ENST00000427645 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
SMARCAL1-206ENST00000427645 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
SMARCAL1-206ENST00000427645 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
SMARCAL1-206ENST00000427645 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
SMARCAL1-206ENST00000427645 MBD5Q9P267 1494 aa12.33□□□□□ -0.44
SMARCAL1-206ENST00000427645 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
SMARCAL1-206ENST00000427645 UBAP1LF5GYI3 381 aa12.32□□□□□ -0.44
SMARCAL1-206ENST00000427645 KIF3BO15066 747 aa12.32□□□□□ -0.44
SMARCAL1-206ENST00000427645 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-206ENST00000427645 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 HRCP23327 699 aa12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 PKD2Q13563 968 aa12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-206ENST00000427645 DAPK1P53355 1430 aa12.29□□□□□ -0.44
SMARCAL1-206ENST00000427645 SOCS7O14512 581 aa12.29□□□□□ -0.44
SMARCAL1-206ENST00000427645 ARHGEF5Q12774 1597 aa12.29□□□□□ -0.44
SMARCAL1-206ENST00000427645 ABCC5O15440 1437 aa12.28□□□□□ -0.44
SMARCAL1-206ENST00000427645 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
SMARCAL1-206ENST00000427645 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
SMARCAL1-206ENST00000427645 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
SMARCAL1-206ENST00000427645 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.45
SMARCAL1-206ENST00000427645 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
SMARCAL1-206ENST00000427645 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
SMARCAL1-206ENST00000427645 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
SMARCAL1-206ENST00000427645 TNRQ92752 1358 aa12.25□□□□□ -0.45
SMARCAL1-206ENST00000427645 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
SMARCAL1-206ENST00000427645 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
SMARCAL1-206ENST00000427645 ZNF142P52746 1687 aaPredicted RBP12.25□□□□□ -0.45
SMARCAL1-206ENST00000427645 HFM1A2PYH4 1435 aa12.24□□□□□ -0.45
SMARCAL1-206ENST00000427645 ANKRD30AQ9BXX3 1397 aa12.24□□□□□ -0.45
SMARCAL1-206ENST00000427645 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
SMARCAL1-206ENST00000427645 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
SMARCAL1-206ENST00000427645 HSPA1LP34931 641 aa12.22□□□□□ -0.45
SMARCAL1-206ENST00000427645 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
SMARCAL1-206ENST00000427645 NAIPQ13075 1403 aa12.21□□□□□ -0.45
SMARCAL1-206ENST00000427645 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.45
SMARCAL1-206ENST00000427645 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
SMARCAL1-206ENST00000427645 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
SMARCAL1-206ENST00000427645 PZPP20742 1482 aa12.21□□□□□ -0.46
SMARCAL1-206ENST00000427645 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
SMARCAL1-206ENST00000427645 THEMISQ8N1K5 641 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-206ENST00000427645 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-206ENST00000427645 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
SMARCAL1-206ENST00000427645 GCC2Q8IWJ2 1684 aa12.18□□□□□ -0.46
SMARCAL1-206ENST00000427645 TOM1O60784 492 aa12.17□□□□□ -0.46
SMARCAL1-206ENST00000427645 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
SMARCAL1-206ENST00000427645 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
SMARCAL1-206ENST00000427645 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
SMARCAL1-206ENST00000427645 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-206ENST00000427645 KIF15Q9NS87 1388 aa12.15□□□□□ -0.46
SMARCAL1-206ENST00000427645 ANKRD50Q9ULJ7 1429 aa12.14□□□□□ -0.47
SMARCAL1-206ENST00000427645 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
SMARCAL1-206ENST00000427645 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
SMARCAL1-206ENST00000427645 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 ABCC3O15438 1527 aa12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 CPS1P31327 1500 aa12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 POLR1AO95602 1720 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-206ENST00000427645 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
SMARCAL1-206ENST00000427645 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
SMARCAL1-206ENST00000427645 MED14O60244 1454 aa12.11□□□□□ -0.47
SMARCAL1-206ENST00000427645 ERVK-7P63135 1459 aa12.11□□□□□ -0.47
SMARCAL1-206ENST00000427645 LTKP29376 864 aa12.11□□□□□ -0.47
SMARCAL1-206ENST00000427645 ALKQ9UM73 1620 aa12.1□□□□□ -0.47
SMARCAL1-206ENST00000427645 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
SMARCAL1-206ENST00000427645 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-206ENST00000427645 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-206ENST00000427645 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
SMARCAL1-206ENST00000427645 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-206ENST00000427645 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
SMARCAL1-206ENST00000427645 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
SMARCAL1-206ENST00000427645 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
SMARCAL1-206ENST00000427645 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
SMARCAL1-206ENST00000427645 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
SMARCAL1-206ENST00000427645 RBM33Q96EV2 1170 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-206ENST00000427645 MPHOSPH9Q99550 1183 aa12.06□□□□□ -0.48
SMARCAL1-206ENST00000427645 CEP152O94986 1710 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms