RNA–Protein interactions for RNA: ENST00000427570.1

NXF3-202, Transcript of nuclear RNA export factor 3, humanhuman

TSL 1 (best)

Gene NXF3, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-202ENST00000427570 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
NXF3-202ENST00000427570 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
NXF3-202ENST00000427570 LRRC9Q6ZRR7 1453 aa12.95□□□□□ -0.34
NXF3-202ENST00000427570 A2ML1A8K2U0 1454 aa12.94□□□□□ -0.34
NXF3-202ENST00000427570 MAP3K1Q13233 1512 aa12.93□□□□□ -0.34
NXF3-202ENST00000427570 TCOF1Q13428 1488 aaKnown RBP12.93□□□□□ -0.34
NXF3-202ENST00000427570 KDM5DQ9BY66 1539 aa12.92□□□□□ -0.34
NXF3-202ENST00000427570 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
NXF3-202ENST00000427570 PZPP20742 1482 aa12.91□□□□□ -0.34
NXF3-202ENST00000427570 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
NXF3-202ENST00000427570 TNRQ92752 1358 aa12.91□□□□□ -0.34
NXF3-202ENST00000427570 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
NXF3-202ENST00000427570 MIA2Q96PC5 1412 aa12.9□□□□□ -0.34
NXF3-202ENST00000427570 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
NXF3-202ENST00000427570 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.35
NXF3-202ENST00000427570 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
NXF3-202ENST00000427570 APLP2Q06481 763 aa12.88□□□□□ -0.35
NXF3-202ENST00000427570 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
NXF3-202ENST00000427570 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
NXF3-202ENST00000427570 NLRP1Q9C000 1473 aa12.87□□□□□ -0.35
NXF3-202ENST00000427570 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
NXF3-202ENST00000427570 UBAP1LF5GYI3 381 aa12.86□□□□□ -0.35
NXF3-202ENST00000427570 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
NXF3-202ENST00000427570 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
NXF3-202ENST00000427570 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
NXF3-202ENST00000427570 ZC3H13Q5T200 1668 aaKnown RBP12.85□□□□□ -0.35
NXF3-202ENST00000427570 UGGT1Q9NYU2 1555 aa12.84□□□□□ -0.35
NXF3-202ENST00000427570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.83□□□□□ -0.36
NXF3-202ENST00000427570 ABCC3O15438 1527 aa12.83□□□□□ -0.36
NXF3-202ENST00000427570 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
NXF3-202ENST00000427570 CPS1P31327 1500 aa12.82□□□□□ -0.36
NXF3-202ENST00000427570 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
NXF3-202ENST00000427570 MED14O60244 1454 aa12.81□□□□□ -0.36
NXF3-202ENST00000427570 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
NXF3-202ENST00000427570 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
NXF3-202ENST00000427570 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
NXF3-202ENST00000427570 TOM1O60784 492 aa12.8□□□□□ -0.36
NXF3-202ENST00000427570 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
NXF3-202ENST00000427570 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 PTPN23Q9H3S7 1636 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 RRP7BPQ9NSQ0 103 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 KIF15Q9NS87 1388 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 ABCC5O15440 1437 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 ERBINQ96RT1 1412 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
NXF3-202ENST00000427570 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
NXF3-202ENST00000427570 ARHGAP31Q2M1Z3 1444 aa12.77□□□□□ -0.37
NXF3-202ENST00000427570 CROCC2H7BZ55 1655 aa12.77□□□□□ -0.37
NXF3-202ENST00000427570 CEP152O94986 1710 aa12.76□□□□□ -0.37
NXF3-202ENST00000427570 VWDEQ8N2E2 1590 aa12.76□□□□□ -0.37
NXF3-202ENST00000427570 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
NXF3-202ENST00000427570 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
NXF3-202ENST00000427570 SOCS7O14512 581 aa12.75□□□□□ -0.37
NXF3-202ENST00000427570 DAPK1P53355 1430 aa12.75□□□□□ -0.37
NXF3-202ENST00000427570 KANK1Q14678 1352 aa12.75□□□□□ -0.37
NXF3-202ENST00000427570 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
NXF3-202ENST00000427570 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
NXF3-202ENST00000427570 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
NXF3-202ENST00000427570 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
NXF3-202ENST00000427570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
NXF3-202ENST00000427570 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
NXF3-202ENST00000427570 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
NXF3-202ENST00000427570 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
NXF3-202ENST00000427570 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
NXF3-202ENST00000427570 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
NXF3-202ENST00000427570 HSPA1LP34931 641 aa12.71□□□□□ -0.37
NXF3-202ENST00000427570 SLIT1O75093 1534 aa12.71□□□□□ -0.38
NXF3-202ENST00000427570 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.38
NXF3-202ENST00000427570 LTKP29376 864 aa12.7□□□□□ -0.38
NXF3-202ENST00000427570 STAG3Q9UJ98 1225 aa12.7□□□□□ -0.38
NXF3-202ENST00000427570 ARHGAP23Q9P227 1491 aa12.7□□□□□ -0.38
NXF3-202ENST00000427570 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
NXF3-202ENST00000427570 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
NXF3-202ENST00000427570 STRCP1A6NGW2 1772 aa12.68□□□□□ -0.38
NXF3-202ENST00000427570 SYNMO15061 1565 aa12.68□□□□□ -0.38
NXF3-202ENST00000427570 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
NXF3-202ENST00000427570 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
NXF3-202ENST00000427570 IDI1Q13907 227 aa12.67□□□□□ -0.38
NXF3-202ENST00000427570 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
NXF3-202ENST00000427570 ADGRL2O95490 1459 aa12.66□□□□□ -0.38
NXF3-202ENST00000427570 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
NXF3-202ENST00000427570 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
NXF3-202ENST00000427570 EFCAB6Q5THR3 1501 aa12.64□□□□□ -0.39
NXF3-202ENST00000427570 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
NXF3-202ENST00000427570 NOS1P29475 1434 aa12.63□□□□□ -0.39
NXF3-202ENST00000427570 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
NXF3-202ENST00000427570 HDGFP51858 240 aaKnown RBP12.62□□□□□ -0.39
NXF3-202ENST00000427570 MED1Q15648 1581 aaPredicted RBP12.61□□□□□ -0.39
NXF3-202ENST00000427570 RPRD2Q5VT52 1461 aaKnown RBP12.61□□□□□ -0.39
NXF3-202ENST00000427570 KCNA6P17658 529 aa12.61□□□□□ -0.39
NXF3-202ENST00000427570 TET3O43151 1660 aa12.59□□□□□ -0.39
NXF3-202ENST00000427570 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
NXF3-202ENST00000427570 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
NXF3-202ENST00000427570 PROSER2Q86WR7 435 aaPredicted RBP12.58□□□□□ -0.4
NXF3-202ENST00000427570 BCANQ96GW7 911 aa12.58□□□□□ -0.4
NXF3-202ENST00000427570 SLC26A8Q96RN1 970 aa12.58□□□□□ -0.4
NXF3-202ENST00000427570 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
NXF3-202ENST00000427570 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
NXF3-202ENST00000427570 FAM135BQ49AJ0 1406 aa12.56□□□□□ -0.4
NXF3-202ENST00000427570 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms