RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 STRCQ7RTU9 1775 aa29.89■■■□□ 2.38
COL9A2-204ENST00000427563 EIF2AK4Q9P2K8 1649 aaKnown RBP29.87■■■□□ 2.37
COL9A2-204ENST00000427563 MROH1Q8NDA8 1641 aa29.86■■■□□ 2.37
COL9A2-204ENST00000427563 ILDR1Q86SU0 546 aaPredicted RBP29.86■■■□□ 2.37
COL9A2-204ENST00000427563 KDM5DQ9BY66 1539 aa29.86■■■□□ 2.37
COL9A2-204ENST00000427563 DUOX2Q9NRD8 1548 aa29.84■■■□□ 2.37
COL9A2-204ENST00000427563 FAM135AQ9P2D6 1515 aa29.84■■■□□ 2.37
COL9A2-204ENST00000427563 MYO3AQ8NEV4 1616 aa29.83■■■□□ 2.37
COL9A2-204ENST00000427563 KIF15Q9NS87 1388 aa29.79■■■□□ 2.36
COL9A2-204ENST00000427563 ZNF142P52746 1687 aaPredicted RBP29.79■■■□□ 2.36
COL9A2-204ENST00000427563 ABCC3O15438 1527 aa29.76■■■□□ 2.36
COL9A2-204ENST00000427563 PZPP20742 1482 aa29.76■■■□□ 2.35
COL9A2-204ENST00000427563 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
COL9A2-204ENST00000427563 WASHC2CQ9Y4E1 1318 aa29.74■■■□□ 2.35
COL9A2-204ENST00000427563 CEP152O94986 1710 aa29.74■■■□□ 2.35
COL9A2-204ENST00000427563 CHIC2Q9UKJ5 165 aa29.74■■■□□ 2.35
COL9A2-204ENST00000427563 ZC3H13Q5T200 1668 aaKnown RBP29.74■■■□□ 2.35
COL9A2-204ENST00000427563 FBXO31Q5XUX0 539 aaPredicted RBP29.73■■■□□ 2.35
COL9A2-204ENST00000427563 PPARGC1BQ86YN6 1023 aaKnown RBP29.73■■■□□ 2.35
COL9A2-204ENST00000427563 CEP170BQ9Y4F5 1589 aaPredicted RBP29.73■■■□□ 2.35
COL9A2-204ENST00000427563 ERBINQ96RT1 1412 aa29.72■■■□□ 2.35
COL9A2-204ENST00000427563 ADGRL2O95490 1459 aa29.72■■■□□ 2.35
COL9A2-204ENST00000427563 FAM50AQ14320 339 aaKnown RBP29.71■■■□□ 2.35
COL9A2-204ENST00000427563 CAMSAP1Q5T5Y3 1602 aa29.71■■■□□ 2.35
COL9A2-204ENST00000427563 NCOA1Q15788 1441 aa29.71■■■□□ 2.35
COL9A2-204ENST00000427563 DEPDC5O75140 1603 aa29.7■■■□□ 2.34
COL9A2-204ENST00000427563 PRDM15P57071 1507 aaPredicted RBP29.7■■■□□ 2.34
COL9A2-204ENST00000427563 ANKRD30AQ9BXX3 1397 aa29.67■■■□□ 2.34
COL9A2-204ENST00000427563 TNRQ92752 1358 aa29.64■■■□□ 2.34
COL9A2-204ENST00000427563 A2ML1A8K2U0 1454 aa29.64■■■□□ 2.34
COL9A2-204ENST00000427563 SPATA31D1Q6ZQQ2 1576 aa29.61■■■□□ 2.33
COL9A2-204ENST00000427563 CFAP65Q6ZU64 1925 aaKnown RBP29.6■■■□□ 2.33
COL9A2-204ENST00000427563 PTPRTO14522 1441 aa29.6■■■□□ 2.33
COL9A2-204ENST00000427563 VWDEQ8N2E2 1590 aa29.6■■■□□ 2.33
COL9A2-204ENST00000427563 ERVK-7P63135 1459 aa29.58■■■□□ 2.33
COL9A2-204ENST00000427563 PLA2R1Q13018 1463 aa29.58■■■□□ 2.33
COL9A2-204ENST00000427563 NCKAP5LQ9HCH0 1330 aa29.55■■■□□ 2.32
COL9A2-204ENST00000427563 DMRT2Q9Y5R5 561 aa29.55■■■□□ 2.32
COL9A2-204ENST00000427563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.53■■■□□ 2.321e-6■■□□□ 12.4
COL9A2-204ENST00000427563 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
COL9A2-204ENST00000427563 NLRP1Q9C000 1473 aa29.52■■■□□ 2.32
COL9A2-204ENST00000427563 LMTK2Q8IWU2 1503 aa29.51■■■□□ 2.32
COL9A2-204ENST00000427563 ANKRD50Q9ULJ7 1429 aa29.51■■■□□ 2.31
COL9A2-204ENST00000427563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.31
COL9A2-204ENST00000427563 POLR1AO95602 1720 aaPredicted RBP29.47■■■□□ 2.31
COL9A2-204ENST00000427563 ROCK1Q13464 1354 aa29.47■■■□□ 2.31
COL9A2-204ENST00000427563 NEURL4Q96JN8 1562 aa29.47■■■□□ 2.31
COL9A2-204ENST00000427563 UGGT1Q9NYU2 1555 aa29.47■■■□□ 2.31
COL9A2-204ENST00000427563 RRBP1Q9P2E9 1410 aaKnown RBP29.45■■■□□ 2.31
COL9A2-204ENST00000427563 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.31
COL9A2-204ENST00000427563 PKD2Q13563 968 aa29.45■■■□□ 2.31
COL9A2-204ENST00000427563 KANK1Q14678 1352 aa29.44■■■□□ 2.3
COL9A2-204ENST00000427563 CERKQ8TCT0 537 aa29.44■■■□□ 2.3
COL9A2-204ENST00000427563 FBXO41Q8TF61 875 aa29.44■■■□□ 2.3
COL9A2-204ENST00000427563 EFCAB6Q5THR3 1501 aa29.43■■■□□ 2.3
COL9A2-204ENST00000427563 UNC13BO14795 1591 aa29.43■■■□□ 2.3
COL9A2-204ENST00000427563 UBR1Q8IWV7 1749 aa29.42■■■□□ 2.3
COL9A2-204ENST00000427563 ITGAEP38570 1179 aa29.41■■■□□ 2.3
COL9A2-204ENST00000427563 SYNMO15061 1565 aa29.38■■■□□ 2.29
COL9A2-204ENST00000427563 PIK3C2BO00750 1634 aa29.35■■■□□ 2.29
COL9A2-204ENST00000427563 THEMISQ8N1K5 641 aaPredicted RBP29.35■■■□□ 2.29
COL9A2-204ENST00000427563 TET3O43151 1660 aa29.34■■■□□ 2.29
COL9A2-204ENST00000427563 NOS1P29475 1434 aa29.34■■■□□ 2.29
COL9A2-204ENST00000427563 ZNF335Q9H4Z2 1342 aaPredicted RBP29.33■■■□□ 2.29
COL9A2-204ENST00000427563 GCC2Q8IWJ2 1684 aa29.31■■■□□ 2.28
COL9A2-204ENST00000427563 MED14O60244 1454 aa29.3■■■□□ 2.28
COL9A2-204ENST00000427563 IQGAP3Q86VI3 1631 aa29.3■■■□□ 2.28
COL9A2-204ENST00000427563 ANKLE2Q86XL3 938 aa29.28■■■□□ 2.28
COL9A2-204ENST00000427563 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
COL9A2-204ENST00000427563 E9PCH4 1651 aa29.27■■■□□ 2.28
COL9A2-204ENST00000427563 RPRD2Q5VT52 1461 aaKnown RBP29.26■■■□□ 2.27
COL9A2-204ENST00000427563 SLIT1O75093 1534 aa29.25■■■□□ 2.27
COL9A2-204ENST00000427563 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
COL9A2-204ENST00000427563 IDI1Q13907 227 aa29.25■■■□□ 2.27
COL9A2-204ENST00000427563 NPHP4O75161 1426 aaPredicted RBP29.25■■■□□ 2.27
COL9A2-204ENST00000427563 KDM5AP29375 1690 aaKnown RBP29.25■■■□□ 2.27
COL9A2-204ENST00000427563 LTKP29376 864 aa29.2■■■□□ 2.26
COL9A2-204ENST00000427563 NAIPQ13075 1403 aa29.2■■■□□ 2.26
COL9A2-204ENST00000427563 SCAF11Q99590 1463 aaKnown RBP29.19■■■□□ 2.26
COL9A2-204ENST00000427563 IQSEC2Q5JU85 1478 aa29.18■■■□□ 2.26
COL9A2-204ENST00000427563 NUP155O75694 1391 aa29.18■■■□□ 2.26
COL9A2-204ENST00000427563 ADGRB3O60242 1522 aa29.18■■■□□ 2.26
COL9A2-204ENST00000427563 MYO5BQ9ULV0 1848 aa29.17■■■□□ 2.26
COL9A2-204ENST00000427563 STRCP1A6NGW2 1772 aa29.16■■■□□ 2.26
COL9A2-204ENST00000427563 TMEM2Q9UHN6 1383 aa29.15■■■□□ 2.26
COL9A2-204ENST00000427563 SLC52A1Q9NWF4 448 aa29.12■■■□□ 2.25
COL9A2-204ENST00000427563 TXNDC2Q86VQ3 553 aa29.11■■■□□ 2.25
COL9A2-204ENST00000427563 TMEM131LA2VDJ0 1609 aa29.11■■■□□ 2.25
COL9A2-204ENST00000427563 HFM1A2PYH4 1435 aa29.09■■■□□ 2.25
COL9A2-204ENST00000427563 STAG3Q9UJ98 1225 aa29.08■■■□□ 2.25
COL9A2-204ENST00000427563 CPS1P31327 1500 aa29.08■■■□□ 2.25
COL9A2-204ENST00000427563 SPHKAPQ2M3C7 1700 aa29.04■■■□□ 2.24
COL9A2-204ENST00000427563 ZFYVE9O95405 1425 aa29.03■■■□□ 2.24
COL9A2-204ENST00000427563 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
COL9A2-204ENST00000427563 LRRC7Q96NW7 1537 aa28.96■■■□□ 2.23
COL9A2-204ENST00000427563 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.23
COL9A2-204ENST00000427563 ALKQ9UM73 1620 aa28.94■■■□□ 2.22
COL9A2-204ENST00000427563 XIRP1Q702N8 1843 aaKnown RBP28.93■■■□□ 2.22
COL9A2-204ENST00000427563 CLTCL1P53675 1640 aa28.92■■■□□ 2.22
COL9A2-204ENST00000427563 UBAP1LF5GYI3 381 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms