RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
COL11A1-204ENST00000427239 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
COL11A1-204ENST00000427239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL11A1-204ENST00000427239 SIGLEC1Q9BZZ2 1709 aa22.89■■□□□ 1.25
COL11A1-204ENST00000427239 MLECQ14165 292 aa22.88■■□□□ 1.25
COL11A1-204ENST00000427239 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
COL11A1-204ENST00000427239 KANK1Q14678 1352 aa22.88■■□□□ 1.25
COL11A1-204ENST00000427239 NUP155O75694 1391 aa22.86■■□□□ 1.25
COL11A1-204ENST00000427239 RNF17Q9BXT8 1623 aaKnown RBP22.86■■□□□ 1.25
COL11A1-204ENST00000427239 WASHC2CQ9Y4E1 1318 aa22.85■■□□□ 1.25
COL11A1-204ENST00000427239 DEPDC5O75140 1603 aa22.84■■□□□ 1.25
COL11A1-204ENST00000427239 ESF1Q9H501 851 aaKnown RBP22.84■■□□□ 1.25
COL11A1-204ENST00000427239 PRDM15P57071 1507 aaPredicted RBP22.83■■□□□ 1.24
COL11A1-204ENST00000427239 UNC13BO14795 1591 aa22.83■■□□□ 1.24
COL11A1-204ENST00000427239 MROH1Q8NDA8 1641 aa22.8■■□□□ 1.24
COL11A1-204ENST00000427239 FAM135AQ9P2D6 1515 aa22.8■■□□□ 1.24
COL11A1-204ENST00000427239 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
COL11A1-204ENST00000427239 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
COL11A1-204ENST00000427239 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
COL11A1-204ENST00000427239 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.23
COL11A1-204ENST00000427239 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
COL11A1-204ENST00000427239 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
COL11A1-204ENST00000427239 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
COL11A1-204ENST00000427239 ABCC3O15438 1527 aa22.73■■□□□ 1.23
COL11A1-204ENST00000427239 PZPP20742 1482 aa22.73■■□□□ 1.23
COL11A1-204ENST00000427239 ZC3H13Q5T200 1668 aaKnown RBP22.72■■□□□ 1.23
COL11A1-204ENST00000427239 ADAMTSL3P82987 1691 aa22.7■■□□□ 1.22
COL11A1-204ENST00000427239 ZMYM3Q14202 1370 aa22.7■■□□□ 1.22
COL11A1-204ENST00000427239 PKD2Q13563 968 aa22.7■■□□□ 1.22
COL11A1-204ENST00000427239 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
COL11A1-204ENST00000427239 TET3O43151 1660 aa22.67■■□□□ 1.22
COL11A1-204ENST00000427239 CLTCQ00610 1675 aaKnown RBP22.66■■□□□ 1.22
COL11A1-204ENST00000427239 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
COL11A1-204ENST00000427239 CEP152O94986 1710 aa22.66■■□□□ 1.22
COL11A1-204ENST00000427239 FER1L4A9Z1Z3 1794 aa22.65■■□□□ 1.22
COL11A1-204ENST00000427239 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
COL11A1-204ENST00000427239 KDM4FA0A1W2PPD8 638 aa22.65■■□□□ 1.22
COL11A1-204ENST00000427239 MADDQ8WXG6 1647 aa22.65■■□□□ 1.22
COL11A1-204ENST00000427239 MROH2AA6NES4 1674 aa22.63■■□□□ 1.21
COL11A1-204ENST00000427239 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
COL11A1-204ENST00000427239 NPATQ14207 1427 aa22.63■■□□□ 1.21
COL11A1-204ENST00000427239 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
COL11A1-204ENST00000427239 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
COL11A1-204ENST00000427239 FOXD1Q16676 465 aa22.6■■□□□ 1.21
COL11A1-204ENST00000427239 FBXO31Q5XUX0 539 aaPredicted RBP22.59■■□□□ 1.21
COL11A1-204ENST00000427239 E9PCH4 1651 aa22.58■■□□□ 1.2
COL11A1-204ENST00000427239 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.2
COL11A1-204ENST00000427239 PTPRMP28827 1452 aa22.57■■□□□ 1.2
COL11A1-204ENST00000427239 PTPRTO14522 1441 aa22.56■■□□□ 1.2
COL11A1-204ENST00000427239 NOS1P29475 1434 aa22.54■■□□□ 1.2
COL11A1-204ENST00000427239 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
COL11A1-204ENST00000427239 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
COL11A1-204ENST00000427239 C3P01024 1663 aa22.53■■□□□ 1.2
COL11A1-204ENST00000427239 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
COL11A1-204ENST00000427239 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
COL11A1-204ENST00000427239 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
COL11A1-204ENST00000427239 ERVK-7P63135 1459 aa22.52■■□□□ 1.2
COL11A1-204ENST00000427239 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
COL11A1-204ENST00000427239 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
COL11A1-204ENST00000427239 TNRQ92752 1358 aa22.49■■□□□ 1.19
COL11A1-204ENST00000427239 PREX1Q8TCU6 1659 aa22.49■■□□□ 1.19
COL11A1-204ENST00000427239 CFAP65Q6ZU64 1925 aaKnown RBP22.48■■□□□ 1.19
COL11A1-204ENST00000427239 TRPM2O94759 1503 aa22.47■■□□□ 1.19
COL11A1-204ENST00000427239 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
COL11A1-204ENST00000427239 SPHKAPQ2M3C7 1700 aa22.46■■□□□ 1.19
COL11A1-204ENST00000427239 IDI1Q13907 227 aa22.45■■□□□ 1.19
COL11A1-204ENST00000427239 SYNMO15061 1565 aa22.43■■□□□ 1.18
COL11A1-204ENST00000427239 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
COL11A1-204ENST00000427239 NLRP1Q9C000 1473 aa22.42■■□□□ 1.18
COL11A1-204ENST00000427239 SIN3AQ96ST3 1273 aa22.39■■□□□ 1.17
COL11A1-204ENST00000427239 STAG3Q9UJ98 1225 aa22.38■■□□□ 1.17
COL11A1-204ENST00000427239 PIK3C2BO00750 1634 aa22.38■■□□□ 1.17
COL11A1-204ENST00000427239 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
COL11A1-204ENST00000427239 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
COL11A1-204ENST00000427239 CLTCL1P53675 1640 aa22.36■■□□□ 1.17
COL11A1-204ENST00000427239 UHRF1BP1Q6BDS2 1440 aa22.35■■□□□ 1.17
COL11A1-204ENST00000427239 CHGAP10645 457 aaKnown RBP22.35■■□□□ 1.17
COL11A1-204ENST00000427239 THEMISQ8N1K5 641 aaPredicted RBP22.34■■□□□ 1.17
COL11A1-204ENST00000427239 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
COL11A1-204ENST00000427239 MYO3AQ8NEV4 1616 aa22.31■■□□□ 1.16
COL11A1-204ENST00000427239 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
COL11A1-204ENST00000427239 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
COL11A1-204ENST00000427239 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
COL11A1-204ENST00000427239 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
COL11A1-204ENST00000427239 KDM5AP29375 1690 aaKnown RBP22.29■■□□□ 1.16
COL11A1-204ENST00000427239 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
COL11A1-204ENST00000427239 RPGRIP1LQ68CZ1 1315 aa22.28■■□□□ 1.16
COL11A1-204ENST00000427239 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
COL11A1-204ENST00000427239 KIF1BO60333 1816 aa22.28■■□□□ 1.16
COL11A1-204ENST00000427239 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
COL11A1-204ENST00000427239 ADGRB3O60242 1522 aa22.27■■□□□ 1.16
COL11A1-204ENST00000427239 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
COL11A1-204ENST00000427239 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
COL11A1-204ENST00000427239 ZNF142P52746 1687 aaPredicted RBP22.25■■□□□ 1.15
COL11A1-204ENST00000427239 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
COL11A1-204ENST00000427239 UBR1Q8IWV7 1749 aa22.24■■□□□ 1.15
COL11A1-204ENST00000427239 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
COL11A1-204ENST00000427239 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.23■■□□□ 1.15
COL11A1-204ENST00000427239 L3MBTL2Q969R5 705 aa22.23■■□□□ 1.15
COL11A1-204ENST00000427239 VGFO15240 615 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms