RNA–Protein interactions for RNA: ENST00000426922.6

LINC01517-201, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5 BASIC

Gene LINC01517, Length 980 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-201ENST00000426922 ADAMTSL3P82987 1691 aa16.78■□□□□ 0.28
LINC01517-201ENST00000426922 NAIPQ13075 1403 aa16.78■□□□□ 0.28
LINC01517-201ENST00000426922 HFM1A2PYH4 1435 aa16.77■□□□□ 0.27
LINC01517-201ENST00000426922 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
LINC01517-201ENST00000426922 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
LINC01517-201ENST00000426922 CNTLNQ9NXG0 1405 aa16.76■□□□□ 0.27
LINC01517-201ENST00000426922 MADDQ8WXG6 1647 aa16.75■□□□□ 0.27
LINC01517-201ENST00000426922 FER1L4A9Z1Z3 1794 aa16.73■□□□□ 0.27
LINC01517-201ENST00000426922 RNF17Q9BXT8 1623 aaKnown RBP16.73■□□□□ 0.27
LINC01517-201ENST00000426922 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
LINC01517-201ENST00000426922 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
LINC01517-201ENST00000426922 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
LINC01517-201ENST00000426922 PTPRMP28827 1452 aa16.72■□□□□ 0.27
LINC01517-201ENST00000426922 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
LINC01517-201ENST00000426922 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
LINC01517-201ENST00000426922 CEBPAP49715 358 aaPredicted RBP16.71■□□□□ 0.27
LINC01517-201ENST00000426922 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
LINC01517-201ENST00000426922 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
LINC01517-201ENST00000426922 NUP155O75694 1391 aa16.7■□□□□ 0.26
LINC01517-201ENST00000426922 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
LINC01517-201ENST00000426922 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
LINC01517-201ENST00000426922 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
LINC01517-201ENST00000426922 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
LINC01517-201ENST00000426922 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
LINC01517-201ENST00000426922 ABCC3O15438 1527 aa16.65■□□□□ 0.26
LINC01517-201ENST00000426922 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
LINC01517-201ENST00000426922 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
LINC01517-201ENST00000426922 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.26
LINC01517-201ENST00000426922 UNC13BO14795 1591 aa16.64■□□□□ 0.25
LINC01517-201ENST00000426922 HRCP23327 699 aa16.64■□□□□ 0.25
LINC01517-201ENST00000426922 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
LINC01517-201ENST00000426922 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
LINC01517-201ENST00000426922 VWDEQ8N2E2 1590 aa16.62■□□□□ 0.25
LINC01517-201ENST00000426922 C3P01024 1663 aa16.62■□□□□ 0.25
LINC01517-201ENST00000426922 CEP152O94986 1710 aa16.62■□□□□ 0.25
LINC01517-201ENST00000426922 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
LINC01517-201ENST00000426922 PZPP20742 1482 aa16.61■□□□□ 0.25
LINC01517-201ENST00000426922 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
LINC01517-201ENST00000426922 CAMSAP1Q5T5Y3 1602 aa16.59■□□□□ 0.25
LINC01517-201ENST00000426922 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
LINC01517-201ENST00000426922 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
LINC01517-201ENST00000426922 NPATQ14207 1427 aa16.59■□□□□ 0.25
LINC01517-201ENST00000426922 PKD2Q13563 968 aa16.57■□□□□ 0.24
LINC01517-201ENST00000426922 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
LINC01517-201ENST00000426922 TET3O43151 1660 aa16.56■□□□□ 0.24
LINC01517-201ENST00000426922 EFCAB6Q5THR3 1501 aa16.56■□□□□ 0.24
LINC01517-201ENST00000426922 TNRQ92752 1358 aa16.56■□□□□ 0.24
LINC01517-201ENST00000426922 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
LINC01517-201ENST00000426922 ERVK-7P63135 1459 aa16.53■□□□□ 0.24
LINC01517-201ENST00000426922 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
LINC01517-201ENST00000426922 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
LINC01517-201ENST00000426922 SETD1BQ9UPS6 1966 aaKnown RBP16.51■□□□□ 0.23
LINC01517-201ENST00000426922 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
LINC01517-201ENST00000426922 SPATA31D1Q6ZQQ2 1576 aa16.5■□□□□ 0.23
LINC01517-201ENST00000426922 E9PCH4 1651 aa16.5■□□□□ 0.23
LINC01517-201ENST00000426922 PREX1Q8TCU6 1659 aa16.5■□□□□ 0.23
LINC01517-201ENST00000426922 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
LINC01517-201ENST00000426922 FOXD1Q16676 465 aa16.49■□□□□ 0.23
LINC01517-201ENST00000426922 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
LINC01517-201ENST00000426922 NOS1P29475 1434 aa16.48■□□□□ 0.23
LINC01517-201ENST00000426922 IDI1Q13907 227 aa16.47■□□□□ 0.23
LINC01517-201ENST00000426922 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
LINC01517-201ENST00000426922 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
LINC01517-201ENST00000426922 HSPA2P54652 639 aa16.45■□□□□ 0.22
LINC01517-201ENST00000426922 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
LINC01517-201ENST00000426922 PTPRTO14522 1441 aa16.45■□□□□ 0.22
LINC01517-201ENST00000426922 LMTK3Q96Q04 1460 aa16.44■□□□□ 0.22
LINC01517-201ENST00000426922 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
LINC01517-201ENST00000426922 SYNMO15061 1565 aa16.43■□□□□ 0.22
LINC01517-201ENST00000426922 UGGT1Q9NYU2 1555 aa16.42■□□□□ 0.22
LINC01517-201ENST00000426922 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
LINC01517-201ENST00000426922 SPHKAPQ2M3C7 1700 aa16.4■□□□□ 0.22
LINC01517-201ENST00000426922 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
LINC01517-201ENST00000426922 PLA2R1Q13018 1463 aa16.39■□□□□ 0.21
LINC01517-201ENST00000426922 TRPM2O94759 1503 aa16.39■□□□□ 0.21
LINC01517-201ENST00000426922 CCDC144AA2RUR9 1427 aa16.38■□□□□ 0.21
LINC01517-201ENST00000426922 ZNF142P52746 1687 aaPredicted RBP16.38■□□□□ 0.21
LINC01517-201ENST00000426922 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
LINC01517-201ENST00000426922 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
LINC01517-201ENST00000426922 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
LINC01517-201ENST00000426922 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
LINC01517-201ENST00000426922 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
LINC01517-201ENST00000426922 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
LINC01517-201ENST00000426922 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
LINC01517-201ENST00000426922 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
LINC01517-201ENST00000426922 ADGRB3O60242 1522 aa16.34■□□□□ 0.21
LINC01517-201ENST00000426922 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.21
LINC01517-201ENST00000426922 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC01517-201ENST00000426922 NCKAP5LQ9HCH0 1330 aa16.33■□□□□ 0.2
LINC01517-201ENST00000426922 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.2
LINC01517-201ENST00000426922 CLTCL1P53675 1640 aa16.33■□□□□ 0.2
LINC01517-201ENST00000426922 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.2
LINC01517-201ENST00000426922 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
LINC01517-201ENST00000426922 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
LINC01517-201ENST00000426922 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
LINC01517-201ENST00000426922 BCANQ96GW7 911 aa16.3■□□□□ 0.2
LINC01517-201ENST00000426922 KIF1BO60333 1816 aa16.29■□□□□ 0.2
LINC01517-201ENST00000426922 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
LINC01517-201ENST00000426922 LTKP29376 864 aa16.29■□□□□ 0.2
LINC01517-201ENST00000426922 SLIT1O75093 1534 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms