RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
USP42-203ENST00000426246 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
USP42-203ENST00000426246 DUOX2Q9NRD8 1548 aa18.41■□□□□ 0.54
USP42-203ENST00000426246 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
USP42-203ENST00000426246 RTEL1-TNFRSF6BF6WH68 1400 aa18.38■□□□□ 0.53
USP42-203ENST00000426246 L3MBTL2Q969R5 705 aa18.38■□□□□ 0.53
USP42-203ENST00000426246 TEX14Q8IWB6 1497 aa18.38■□□□□ 0.53
USP42-203ENST00000426246 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
USP42-203ENST00000426246 NBR1Q14596 966 aa18.37■□□□□ 0.53
USP42-203ENST00000426246 ERBINQ96RT1 1412 aa18.37■□□□□ 0.53
USP42-203ENST00000426246 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
USP42-203ENST00000426246 ADGRL1O94910 1474 aa18.37■□□□□ 0.53
USP42-203ENST00000426246 NUP155O75694 1391 aa18.36■□□□□ 0.53
USP42-203ENST00000426246 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
USP42-203ENST00000426246 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
USP42-203ENST00000426246 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
USP42-203ENST00000426246 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
USP42-203ENST00000426246 ATP7AQ04656 1500 aa18.34■□□□□ 0.53
USP42-203ENST00000426246 NPM2Q86SE8 214 aaKnown RBP18.34■□□□□ 0.53
USP42-203ENST00000426246 KIDINS220Q9ULH0 1771 aa18.33■□□□□ 0.53
USP42-203ENST00000426246 DEPDC5O75140 1603 aa18.33■□□□□ 0.53
USP42-203ENST00000426246 CD109Q6YHK3 1445 aa18.33■□□□□ 0.53
USP42-203ENST00000426246 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
USP42-203ENST00000426246 KDM5CP41229 1560 aa18.32■□□□□ 0.52
USP42-203ENST00000426246 GLI2P10070 1586 aa18.31■□□□□ 0.52
USP42-203ENST00000426246 PKD2Q13563 968 aa18.31■□□□□ 0.52
USP42-203ENST00000426246 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
USP42-203ENST00000426246 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
USP42-203ENST00000426246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
USP42-203ENST00000426246 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
USP42-203ENST00000426246 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
USP42-203ENST00000426246 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
USP42-203ENST00000426246 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.51
USP42-203ENST00000426246 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
USP42-203ENST00000426246 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
USP42-203ENST00000426246 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
USP42-203ENST00000426246 MROH1Q8NDA8 1641 aa18.26■□□□□ 0.51
USP42-203ENST00000426246 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
USP42-203ENST00000426246 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
USP42-203ENST00000426246 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
USP42-203ENST00000426246 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
USP42-203ENST00000426246 NEO1Q92859 1461 aa18.25■□□□□ 0.51
USP42-203ENST00000426246 PPRC1Q5VV67 1664 aaKnown RBP18.23■□□□□ 0.51
USP42-203ENST00000426246 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
USP42-203ENST00000426246 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
USP42-203ENST00000426246 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
USP42-203ENST00000426246 E9PCH4 1651 aa18.22■□□□□ 0.51
USP42-203ENST00000426246 ATP10AO60312 1499 aa18.21■□□□□ 0.51
USP42-203ENST00000426246 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
USP42-203ENST00000426246 PRDM15P57071 1507 aaPredicted RBP18.21■□□□□ 0.51
USP42-203ENST00000426246 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
USP42-203ENST00000426246 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
USP42-203ENST00000426246 BCORL1Q5H9F3 1711 aa18.2■□□□□ 0.5
USP42-203ENST00000426246 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
USP42-203ENST00000426246 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
USP42-203ENST00000426246 NBPF8Q3BBV2 869 aa18.19■□□□□ 0.5
USP42-203ENST00000426246 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
USP42-203ENST00000426246 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
USP42-203ENST00000426246 TET3O43151 1660 aa18.17■□□□□ 0.5
USP42-203ENST00000426246 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
USP42-203ENST00000426246 UHRF1BP1Q6BDS2 1440 aa18.14■□□□□ 0.49
USP42-203ENST00000426246 MSH5O43196 834 aa18.13■□□□□ 0.49
USP42-203ENST00000426246 PRKRIP1Q9H875 184 aaPredicted RBP18.13■□□□□ 0.49
USP42-203ENST00000426246 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
USP42-203ENST00000426246 A2MP01023 1474 aa18.13■□□□□ 0.49
USP42-203ENST00000426246 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
USP42-203ENST00000426246 DIP2CQ9Y2E4 1556 aa18.12■□□□□ 0.49
USP42-203ENST00000426246 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
USP42-203ENST00000426246 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
USP42-203ENST00000426246 TRPM2O94759 1503 aa18.1■□□□□ 0.49
USP42-203ENST00000426246 PTPRTO14522 1441 aa18.1■□□□□ 0.49
USP42-203ENST00000426246 LMTK2Q8IWU2 1503 aa18.1■□□□□ 0.49
USP42-203ENST00000426246 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
USP42-203ENST00000426246 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
USP42-203ENST00000426246 CCDC144AA2RUR9 1427 aa18.09■□□□□ 0.49
USP42-203ENST00000426246 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
USP42-203ENST00000426246 CEP152O94986 1710 aa18.08■□□□□ 0.49
USP42-203ENST00000426246 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.49
USP42-203ENST00000426246 ZMYM4Q5VZL5 1548 aa18.08■□□□□ 0.49
USP42-203ENST00000426246 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.48
USP42-203ENST00000426246 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
USP42-203ENST00000426246 CLTCL1P53675 1640 aa18.06■□□□□ 0.48
USP42-203ENST00000426246 FAM69CQ0P6D2 419 aa18.06■□□□□ 0.48
USP42-203ENST00000426246 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
USP42-203ENST00000426246 KIF3BO15066 747 aa18.05■□□□□ 0.48
USP42-203ENST00000426246 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
USP42-203ENST00000426246 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
USP42-203ENST00000426246 TRPM1Q7Z4N2 1603 aa18.04■□□□□ 0.48
USP42-203ENST00000426246 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
USP42-203ENST00000426246 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
USP42-203ENST00000426246 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
USP42-203ENST00000426246 SKAP1Q86WV1 359 aa17.99■□□□□ 0.47
USP42-203ENST00000426246 KANK1Q14678 1352 aa17.99■□□□□ 0.47
USP42-203ENST00000426246 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
USP42-203ENST00000426246 ABCC3O15438 1527 aa17.99■□□□□ 0.47
USP42-203ENST00000426246 SIGLEC1Q9BZZ2 1709 aa17.99■□□□□ 0.47
USP42-203ENST00000426246 PLIN1O60240 522 aa17.97■□□□□ 0.47
USP42-203ENST00000426246 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
USP42-203ENST00000426246 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
USP42-203ENST00000426246 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms