RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 ABCA6Q8N139 1617 aa13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 FGD6Q6ZV73 1430 aa13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 CFDP1Q9UEE9 299 aaPredicted RBP13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 DIP2CQ9Y2E4 1556 aa13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 ARHGEF12Q9NZN5 1544 aa13.94□□□□□ -0.18
TPM3P4-201ENST00000425942 KANK4Q5T7N3 995 aaPredicted RBP13.93□□□□□ -0.18
TPM3P4-201ENST00000425942 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
TPM3P4-201ENST00000425942 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
TPM3P4-201ENST00000425942 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
TPM3P4-201ENST00000425942 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
TPM3P4-201ENST00000425942 BCORL1Q5H9F3 1711 aa13.9□□□□□ -0.18
TPM3P4-201ENST00000425942 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.19
TPM3P4-201ENST00000425942 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
TPM3P4-201ENST00000425942 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
TPM3P4-201ENST00000425942 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
TPM3P4-201ENST00000425942 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
TPM3P4-201ENST00000425942 AGLP35573 1532 aa13.86□□□□□ -0.19
TPM3P4-201ENST00000425942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM3P4-201ENST00000425942 SIGLEC1Q9BZZ2 1709 aa13.85□□□□□ -0.19
TPM3P4-201ENST00000425942 YEATS2Q9ULM3 1422 aa13.85□□□□□ -0.19
TPM3P4-201ENST00000425942 RAPGEF3O95398 923 aa13.85□□□□□ -0.19
TPM3P4-201ENST00000425942 ATP10AO60312 1499 aa13.85□□□□□ -0.19
TPM3P4-201ENST00000425942 FER1L4A9Z1Z3 1794 aa13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 HAX1O00165 279 aa13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 PROM2Q8N271 834 aa13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
TPM3P4-201ENST00000425942 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
TPM3P4-201ENST00000425942 ADAMTSL3P82987 1691 aa13.83□□□□□ -0.2
TPM3P4-201ENST00000425942 DAPK1P53355 1430 aa13.82□□□□□ -0.2
TPM3P4-201ENST00000425942 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
TPM3P4-201ENST00000425942 SPAG9O60271 1321 aaKnown RBP13.81□□□□□ -0.2
TPM3P4-201ENST00000425942 RNF17Q9BXT8 1623 aaKnown RBP13.8□□□□□ -0.2
TPM3P4-201ENST00000425942 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
TPM3P4-201ENST00000425942 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
TPM3P4-201ENST00000425942 A2MP01023 1474 aa13.79□□□□□ -0.2
TPM3P4-201ENST00000425942 DUOX2Q9NRD8 1548 aa13.79□□□□□ -0.2
TPM3P4-201ENST00000425942 AFAP1Q8N556 730 aa13.78□□□□□ -0.2
TPM3P4-201ENST00000425942 ZNF644Q9H582 1327 aaPredicted RBP13.78□□□□□ -0.2
TPM3P4-201ENST00000425942 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
TPM3P4-201ENST00000425942 ABCC5O15440 1437 aa13.77□□□□□ -0.21
TPM3P4-201ENST00000425942 DEPDC5O75140 1603 aa13.77□□□□□ -0.21
TPM3P4-201ENST00000425942 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.21
TPM3P4-201ENST00000425942 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
TPM3P4-201ENST00000425942 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
TPM3P4-201ENST00000425942 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
TPM3P4-201ENST00000425942 EVX2Q03828 476 aa13.75□□□□□ -0.21
TPM3P4-201ENST00000425942 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
TPM3P4-201ENST00000425942 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
TPM3P4-201ENST00000425942 FKBP8Q14318 412 aa13.74□□□□□ -0.21
TPM3P4-201ENST00000425942 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
TPM3P4-201ENST00000425942 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
TPM3P4-201ENST00000425942 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
TPM3P4-201ENST00000425942 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
TPM3P4-201ENST00000425942 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
TPM3P4-201ENST00000425942 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.21
TPM3P4-201ENST00000425942 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
TPM3P4-201ENST00000425942 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
TPM3P4-201ENST00000425942 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
TPM3P4-201ENST00000425942 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TPM3P4-201ENST00000425942 MROH1Q8NDA8 1641 aa13.7□□□□□ -0.22
TPM3P4-201ENST00000425942 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
TPM3P4-201ENST00000425942 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
TPM3P4-201ENST00000425942 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
TPM3P4-201ENST00000425942 UNC13BO14795 1591 aa13.69□□□□□ -0.22
TPM3P4-201ENST00000425942 C3P01024 1663 aa13.69□□□□□ -0.22
TPM3P4-201ENST00000425942 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
TPM3P4-201ENST00000425942 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
TPM3P4-201ENST00000425942 CEP152O94986 1710 aa13.67□□□□□ -0.22
TPM3P4-201ENST00000425942 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.22
TPM3P4-201ENST00000425942 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
TPM3P4-201ENST00000425942 PREX1Q8TCU6 1659 aa13.64□□□□□ -0.23
TPM3P4-201ENST00000425942 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
TPM3P4-201ENST00000425942 PTPRMP28827 1452 aa13.64□□□□□ -0.23
TPM3P4-201ENST00000425942 IQGAP3Q86VI3 1631 aa13.63□□□□□ -0.23
TPM3P4-201ENST00000425942 PTPRKQ15262 1439 aa13.63□□□□□ -0.23
TPM3P4-201ENST00000425942 LMTK2Q8IWU2 1503 aa13.62□□□□□ -0.23
TPM3P4-201ENST00000425942 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
TPM3P4-201ENST00000425942 ABCC3O15438 1527 aa13.61□□□□□ -0.23
TPM3P4-201ENST00000425942 TET3O43151 1660 aa13.61□□□□□ -0.23
TPM3P4-201ENST00000425942 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
TPM3P4-201ENST00000425942 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
TPM3P4-201ENST00000425942 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
TPM3P4-201ENST00000425942 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
TPM3P4-201ENST00000425942 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
TPM3P4-201ENST00000425942 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
TPM3P4-201ENST00000425942 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
TPM3P4-201ENST00000425942 NPATQ14207 1427 aa13.57□□□□□ -0.24
TPM3P4-201ENST00000425942 PZPP20742 1482 aa13.57□□□□□ -0.24
TPM3P4-201ENST00000425942 NAIPQ13075 1403 aa13.56□□□□□ -0.24
TPM3P4-201ENST00000425942 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
TPM3P4-201ENST00000425942 KANK1Q14678 1352 aa13.56□□□□□ -0.24
TPM3P4-201ENST00000425942 SPATA31D1Q6ZQQ2 1576 aa13.55□□□□□ -0.24
TPM3P4-201ENST00000425942 KIF3BO15066 747 aa13.55□□□□□ -0.24
TPM3P4-201ENST00000425942 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
TPM3P4-201ENST00000425942 ARHGAP31Q2M1Z3 1444 aa13.55□□□□□ -0.24
TPM3P4-201ENST00000425942 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
TPM3P4-201ENST00000425942 KDM5AP29375 1690 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms