RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SETD5Q9C0A6 1442 aa36.03■■■■□ 3.36
APOE-202ENST00000425718 FER1L4A9Z1Z3 1794 aa36.03■■■■□ 3.36
APOE-202ENST00000425718 ADAMTSL3P82987 1691 aa36.03■■■■□ 3.36
APOE-202ENST00000425718 GGT6Q6P531 493 aa36.02■■■■□ 3.36
APOE-202ENST00000425718 ESF1Q9H501 851 aaKnown RBP36.02■■■■□ 3.36
APOE-202ENST00000425718 PRDM15P57071 1507 aaPredicted RBP36.02■■■■□ 3.36
APOE-202ENST00000425718 KANK1Q14678 1352 aa36.02■■■■□ 3.36
APOE-202ENST00000425718 ZC3H13Q5T200 1668 aaKnown RBP36.01■■■■□ 3.36
APOE-202ENST00000425718 UNC13BO14795 1591 aa36.01■■■■□ 3.35
APOE-202ENST00000425718 MLECQ14165 292 aa36■■■■□ 3.35
APOE-202ENST00000425718 CNTLNQ9NXG0 1405 aa36■■■■□ 3.35
APOE-202ENST00000425718 MROH1Q8NDA8 1641 aa35.96■■■■□ 3.35
APOE-202ENST00000425718 KDM5DQ9BY66 1539 aa35.95■■■■□ 3.35
APOE-202ENST00000425718 MROH2AA6NES4 1674 aa35.94■■■■□ 3.34
APOE-202ENST00000425718 MADDQ8WXG6 1647 aa35.93■■■■□ 3.34
APOE-202ENST00000425718 HRCP23327 699 aa35.92■■■■□ 3.34
APOE-202ENST00000425718 WASHC2CQ9Y4E1 1318 aa35.89■■■■□ 3.34
APOE-202ENST00000425718 VWDEQ8N2E2 1590 aa35.89■■■■□ 3.34
APOE-202ENST00000425718 CLTCQ00610 1675 aaKnown RBP35.88■■■■□ 3.33
APOE-202ENST00000425718 RIMS1Q86UR5 1692 aaKnown RBP35.88■■■■□ 3.33
APOE-202ENST00000425718 IQGAP3Q86VI3 1631 aa35.87■■■■□ 3.33
APOE-202ENST00000425718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.87■■■■□ 3.334e-44■□□□□ 8.7
APOE-202ENST00000425718 CEP152O94986 1710 aa35.86■■■■□ 3.33
APOE-202ENST00000425718 RAB3GAP2Q9H2M9 1393 aa35.86■■■■□ 3.33
APOE-202ENST00000425718 ABCC3O15438 1527 aa35.85■■■■□ 3.33
APOE-202ENST00000425718 LMTK2Q8IWU2 1503 aa35.84■■■■□ 3.33
APOE-202ENST00000425718 NUP155O75694 1391 aa35.83■■■■□ 3.33
APOE-202ENST00000425718 TET3O43151 1660 aa35.8■■■■□ 3.32
APOE-202ENST00000425718 CAMSAP1Q5T5Y3 1602 aa35.79■■■■□ 3.32
APOE-202ENST00000425718 TRIM52Q96A61 297 aa35.79■■■■□ 3.32
APOE-202ENST00000425718 KDM4FA0A1W2PPD8 638 aa35.75■■■■□ 3.31
APOE-202ENST00000425718 PCGF6Q9BYE7 350 aa35.74■■■■□ 3.31
APOE-202ENST00000425718 C3P01024 1663 aa35.74■■■■□ 3.31
APOE-202ENST00000425718 ZMYM3Q14202 1370 aa35.73■■■■□ 3.31
APOE-202ENST00000425718 ARHGAP31Q2M1Z3 1444 aa35.73■■■■□ 3.31
APOE-202ENST00000425718 PTPRMP28827 1452 aa35.72■■■■□ 3.31
APOE-202ENST00000425718 EFCAB6Q5THR3 1501 aa35.72■■■■□ 3.31
APOE-202ENST00000425718 RPRD2Q5VT52 1461 aaKnown RBP35.7■■■■□ 3.31
APOE-202ENST00000425718 SETD1BQ9UPS6 1966 aaKnown RBP35.7■■■■□ 3.31
APOE-202ENST00000425718 PZPP20742 1482 aa35.69■■■■□ 3.3
APOE-202ENST00000425718 CFAP65Q6ZU64 1925 aaKnown RBP35.65■■■■□ 3.3
APOE-202ENST00000425718 SLC4A1APQ9BWU0 796 aaKnown RBP35.63■■■■□ 3.29
APOE-202ENST00000425718 NPATQ14207 1427 aa35.62■■■■□ 3.29
APOE-202ENST00000425718 E9PCH4 1651 aa35.61■■■■□ 3.29
APOE-202ENST00000425718 PREX1Q8TCU6 1659 aa35.59■■■■□ 3.29
APOE-202ENST00000425718 MPHOSPH9Q99550 1183 aa35.56■■■■□ 3.28
APOE-202ENST00000425718 SPATA31D1Q6ZQQ2 1576 aa35.55■■■■□ 3.28
APOE-202ENST00000425718 ERVK-7P63135 1459 aa35.53■■■■□ 3.28
APOE-202ENST00000425718 PKD2Q13563 968 aa35.51■■■■□ 3.28
APOE-202ENST00000425718 SPHKAPQ2M3C7 1700 aa35.51■■■■□ 3.27
APOE-202ENST00000425718 CEBPAP49715 358 aaPredicted RBP35.5■■■■□ 3.27
APOE-202ENST00000425718 PLPPR3Q6T4P5 718 aa35.46■■■■□ 3.27
APOE-202ENST00000425718 TNRQ92752 1358 aa35.46■■■■□ 3.27
APOE-202ENST00000425718 NOS1P29475 1434 aa35.46■■■■□ 3.27
APOE-202ENST00000425718 FBXO31Q5XUX0 539 aaPredicted RBP35.42■■■■□ 3.26
APOE-202ENST00000425718 NLRP1Q9C000 1473 aa35.41■■■■□ 3.26
APOE-202ENST00000425718 PTPRTO14522 1441 aa35.4■■■■□ 3.26
APOE-202ENST00000425718 SLC52A1Q9NWF4 448 aa35.39■■■■□ 3.26
APOE-202ENST00000425718 TRPM2O94759 1503 aa35.38■■■■□ 3.25
APOE-202ENST00000425718 MYO3AQ8NEV4 1616 aa35.38■■■■□ 3.25
APOE-202ENST00000425718 UHRF1BP1Q6BDS2 1440 aa35.37■■■■□ 3.25
APOE-202ENST00000425718 SYNMO15061 1565 aa35.36■■■■□ 3.25
APOE-202ENST00000425718 AEBP2Q6ZN18 517 aaPredicted RBP35.36■■■■□ 3.25
APOE-202ENST00000425718 ZNF142P52746 1687 aaPredicted RBP35.35■■■■□ 3.25
APOE-202ENST00000425718 PIK3C2BO00750 1634 aa35.32■■■■□ 3.25
APOE-202ENST00000425718 KDM5AP29375 1690 aaKnown RBP35.32■■■■□ 3.24
APOE-202ENST00000425718 A2ML1A8K2U0 1454 aa35.29■■■■□ 3.24
APOE-202ENST00000425718 DHX57Q6P158 1386 aaKnown RBP35.29■■■■□ 3.24
APOE-202ENST00000425718 KIF1BO60333 1816 aa35.29■■■■□ 3.24
APOE-202ENST00000425718 CEP170BQ9Y4F5 1589 aaPredicted RBP35.28■■■■□ 3.24
APOE-202ENST00000425718 CCDC144AA2RUR9 1427 aa35.26■■■■□ 3.24
APOE-202ENST00000425718 FOXD1Q16676 465 aa35.25■■■■□ 3.23
APOE-202ENST00000425718 PLA2R1Q13018 1463 aa35.24■■■■□ 3.23
APOE-202ENST00000425718 ANKRD30BQ9BXX2 1392 aa35.23■■■■□ 3.23
APOE-202ENST00000425718 CLTCL1P53675 1640 aa35.22■■■■□ 3.23
APOE-202ENST00000425718 UGGT1Q9NYU2 1555 aa35.21■■■■□ 3.23
APOE-202ENST00000425718 IDI1Q13907 227 aa35.21■■■■□ 3.23
APOE-202ENST00000425718 STAG3Q9UJ98 1225 aa35.2■■■■□ 3.23
APOE-202ENST00000425718 ADGRB3O60242 1522 aa35.2■■■■□ 3.23
APOE-202ENST00000425718 UBR1Q8IWV7 1749 aa35.2■■■■□ 3.23
APOE-202ENST00000425718 THEMISQ8N1K5 641 aaPredicted RBP35.16■■■■□ 3.22
APOE-202ENST00000425718 NEURL4Q96JN8 1562 aa35.14■■■■□ 3.22
APOE-202ENST00000425718 LMTK3Q96Q04 1460 aa35.14■■■■□ 3.22
APOE-202ENST00000425718 TMEM131LA2VDJ0 1609 aa35.14■■■■□ 3.22
APOE-202ENST00000425718 CLSPNQ9HAW4 1339 aa35.13■■■■□ 3.21
APOE-202ENST00000425718 MYO5BQ9ULV0 1848 aa35.12■■■■□ 3.21
APOE-202ENST00000425718 CHGAP10645 457 aaKnown RBP35.07■■■■□ 3.2
APOE-202ENST00000425718 HDGFP51858 240 aaKnown RBP35.05■■■■□ 3.2
APOE-202ENST00000425718 SLIT1O75093 1534 aa35.02■■■■□ 3.2
APOE-202ENST00000425718 CCER1Q8TC90 406 aaPredicted RBP35.01■■■■□ 3.2
APOE-202ENST00000425718 RPGRIP1LQ68CZ1 1315 aa34.99■■■■□ 3.19
APOE-202ENST00000425718 TMEM2Q9UHN6 1383 aa34.99■■■■□ 3.19
APOE-202ENST00000425718 ARHGAP23Q9P227 1491 aa34.98■■■■□ 3.19
APOE-202ENST00000425718 POLR1AO95602 1720 aaPredicted RBP34.98■■■■□ 3.19
APOE-202ENST00000425718 SPATA31E1Q6ZUB1 1445 aa34.98■■■■□ 3.19
APOE-202ENST00000425718 ZNF326Q5BKZ1 582 aaKnown RBP34.97■■■■□ 3.19
APOE-202ENST00000425718 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.97■■■■□ 3.19
APOE-202ENST00000425718 EID1Q9Y6B2 187 aa34.97■■■■□ 3.19
APOE-202ENST00000425718 ANKLE2Q86XL3 938 aa34.94■■■■□ 3.18
APOE-202ENST00000425718 RIMS2Q9UQ26 1411 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms