RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
TUBA4A-204ENST00000425551 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
TUBA4A-204ENST00000425551 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
TUBA4A-204ENST00000425551 CLIP1P30622 1438 aa16.18■□□□□ 0.18
TUBA4A-204ENST00000425551 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
TUBA4A-204ENST00000425551 XIRP1Q702N8 1843 aaKnown RBP16.17■□□□□ 0.18
TUBA4A-204ENST00000425551 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
TUBA4A-204ENST00000425551 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
TUBA4A-204ENST00000425551 MED14O60244 1454 aa16.15■□□□□ 0.18
TUBA4A-204ENST00000425551 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
TUBA4A-204ENST00000425551 LTKP29376 864 aa16.12■□□□□ 0.17
TUBA4A-204ENST00000425551 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
TUBA4A-204ENST00000425551 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
TUBA4A-204ENST00000425551 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
TUBA4A-204ENST00000425551 KIF3BO15066 747 aa16.1■□□□□ 0.17
TUBA4A-204ENST00000425551 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
TUBA4A-204ENST00000425551 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
TUBA4A-204ENST00000425551 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
TUBA4A-204ENST00000425551 PZPP20742 1482 aa16.08■□□□□ 0.16
TUBA4A-204ENST00000425551 UGGT1Q9NYU2 1555 aa16.08■□□□□ 0.16
TUBA4A-204ENST00000425551 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
TUBA4A-204ENST00000425551 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
TUBA4A-204ENST00000425551 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
TUBA4A-204ENST00000425551 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
TUBA4A-204ENST00000425551 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
TUBA4A-204ENST00000425551 DHX29Q7Z478 1369 aaKnown RBP16.04■□□□□ 0.16
TUBA4A-204ENST00000425551 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
TUBA4A-204ENST00000425551 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
TUBA4A-204ENST00000425551 LRP6O75581 1613 aa16.02■□□□□ 0.16
TUBA4A-204ENST00000425551 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.16
TUBA4A-204ENST00000425551 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
TUBA4A-204ENST00000425551 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
TUBA4A-204ENST00000425551 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
TUBA4A-204ENST00000425551 EEA1Q15075 1411 aa16.01■□□□□ 0.15
TUBA4A-204ENST00000425551 ROBO1Q9Y6N7 1651 aa16■□□□□ 0.15
TUBA4A-204ENST00000425551 TMEM94Q12767 1356 aa16■□□□□ 0.15
TUBA4A-204ENST00000425551 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
TUBA4A-204ENST00000425551 SYNMO15061 1565 aa15.99■□□□□ 0.15
TUBA4A-204ENST00000425551 KDM5DQ9BY66 1539 aa15.98■□□□□ 0.15
TUBA4A-204ENST00000425551 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
TUBA4A-204ENST00000425551 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
TUBA4A-204ENST00000425551 TXNDC2Q86VQ3 553 aa15.96■□□□□ 0.15
TUBA4A-204ENST00000425551 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
TUBA4A-204ENST00000425551 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
TUBA4A-204ENST00000425551 SLC26A8Q96RN1 970 aa15.93■□□□□ 0.14
TUBA4A-204ENST00000425551 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
TUBA4A-204ENST00000425551 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
TUBA4A-204ENST00000425551 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
TUBA4A-204ENST00000425551 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
TUBA4A-204ENST00000425551 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
TUBA4A-204ENST00000425551 PLEKHH2Q8IVE3 1493 aa15.9■□□□□ 0.14
TUBA4A-204ENST00000425551 ARHGAP23Q9P227 1491 aa15.9■□□□□ 0.14
TUBA4A-204ENST00000425551 ABCC3O15438 1527 aa15.89■□□□□ 0.13
TUBA4A-204ENST00000425551 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
TUBA4A-204ENST00000425551 PHLPP1O60346 1717 aa15.88■□□□□ 0.13
TUBA4A-204ENST00000425551 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
TUBA4A-204ENST00000425551 JCADQ9P266 1359 aa15.87■□□□□ 0.13
TUBA4A-204ENST00000425551 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
TUBA4A-204ENST00000425551 KCNA6P17658 529 aa15.85■□□□□ 0.13
TUBA4A-204ENST00000425551 MROH1Q8NDA8 1641 aa15.85■□□□□ 0.13
TUBA4A-204ENST00000425551 SLIT1O75093 1534 aa15.84■□□□□ 0.13
TUBA4A-204ENST00000425551 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
TUBA4A-204ENST00000425551 SETBP1Q9Y6X0 1596 aa15.83■□□□□ 0.13
TUBA4A-204ENST00000425551 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
TUBA4A-204ENST00000425551 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
TUBA4A-204ENST00000425551 RXRBP28702 533 aa15.83■□□□□ 0.12
TUBA4A-204ENST00000425551 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
TUBA4A-204ENST00000425551 TET3O43151 1660 aa15.81■□□□□ 0.12
TUBA4A-204ENST00000425551 CEP152O94986 1710 aa15.81■□□□□ 0.12
TUBA4A-204ENST00000425551 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
TUBA4A-204ENST00000425551 RGS12O14924 1447 aa15.8■□□□□ 0.12
TUBA4A-204ENST00000425551 CAMSAP2Q08AD1 1489 aa15.79■□□□□ 0.12
TUBA4A-204ENST00000425551 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
TUBA4A-204ENST00000425551 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
TUBA4A-204ENST00000425551 ZNF772Q68DY9 489 aaPredicted RBP15.79■□□□□ 0.12
TUBA4A-204ENST00000425551 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
TUBA4A-204ENST00000425551 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
TUBA4A-204ENST00000425551 PIK3C2BO00750 1634 aa15.78■□□□□ 0.12
TUBA4A-204ENST00000425551 AFF2P51816 1311 aa15.77■□□□□ 0.12
TUBA4A-204ENST00000425551 IDI1Q13907 227 aa15.77■□□□□ 0.12
TUBA4A-204ENST00000425551 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
TUBA4A-204ENST00000425551 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
TUBA4A-204ENST00000425551 MAST1Q9Y2H9 1570 aa15.73■□□□□ 0.11
TUBA4A-204ENST00000425551 SPATA31A6Q5VVP1 1343 aa15.72■□□□□ 0.11
TUBA4A-204ENST00000425551 DIP2AQ14689 1571 aa15.72■□□□□ 0.11
TUBA4A-204ENST00000425551 MSH6P52701 1360 aa15.72■□□□□ 0.11
TUBA4A-204ENST00000425551 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
TUBA4A-204ENST00000425551 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
TUBA4A-204ENST00000425551 EP400Q96L91 3159 aa15.71■□□□□ 0.1
TUBA4A-204ENST00000425551 NWD1Q149M9 1564 aa15.7■□□□□ 0.1
TUBA4A-204ENST00000425551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
TUBA4A-204ENST00000425551 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
TUBA4A-204ENST00000425551 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
TUBA4A-204ENST00000425551 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
TUBA4A-204ENST00000425551 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
TUBA4A-204ENST00000425551 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
TUBA4A-204ENST00000425551 KDM5AP29375 1690 aaKnown RBP15.67■□□□□ 0.1
TUBA4A-204ENST00000425551 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
TUBA4A-204ENST00000425551 STAG3Q9UJ98 1225 aa15.66■□□□□ 0.1
TUBA4A-204ENST00000425551 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms