RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
VSTM1-205ENST00000425006 THEMISQ8N1K5 641 aaPredicted RBP18.68■□□□□ 0.58
VSTM1-205ENST00000425006 SYCP2Q9BX26 1530 aa18.68■□□□□ 0.58
VSTM1-205ENST00000425006 MED14O60244 1454 aa18.67■□□□□ 0.58
VSTM1-205ENST00000425006 SYNMO15061 1565 aa18.65■□□□□ 0.58
VSTM1-205ENST00000425006 STRCP1A6NGW2 1772 aa18.65■□□□□ 0.58
VSTM1-205ENST00000425006 DEPDC5O75140 1603 aa18.63■□□□□ 0.57
VSTM1-205ENST00000425006 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
VSTM1-205ENST00000425006 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
VSTM1-205ENST00000425006 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
VSTM1-205ENST00000425006 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
VSTM1-205ENST00000425006 FAM135AQ9P2D6 1515 aa18.62■□□□□ 0.57
VSTM1-205ENST00000425006 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
VSTM1-205ENST00000425006 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
VSTM1-205ENST00000425006 UPF1Q92900 1129 aaKnown RBP eCLIP18.6■□□□□ 0.57
VSTM1-205ENST00000425006 PZPP20742 1482 aa18.58■□□□□ 0.57
VSTM1-205ENST00000425006 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
VSTM1-205ENST00000425006 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
VSTM1-205ENST00000425006 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
VSTM1-205ENST00000425006 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
VSTM1-205ENST00000425006 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
VSTM1-205ENST00000425006 CCDC18Q5T9S5 1454 aa18.53■□□□□ 0.56
VSTM1-205ENST00000425006 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
VSTM1-205ENST00000425006 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
VSTM1-205ENST00000425006 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
VSTM1-205ENST00000425006 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
VSTM1-205ENST00000425006 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
VSTM1-205ENST00000425006 KIF3BO15066 747 aa18.5■□□□□ 0.55
VSTM1-205ENST00000425006 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
VSTM1-205ENST00000425006 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
VSTM1-205ENST00000425006 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
VSTM1-205ENST00000425006 XIRP1Q702N8 1843 aaKnown RBP18.46■□□□□ 0.55
VSTM1-205ENST00000425006 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
VSTM1-205ENST00000425006 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
VSTM1-205ENST00000425006 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
VSTM1-205ENST00000425006 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
VSTM1-205ENST00000425006 JCADQ9P266 1359 aa18.42■□□□□ 0.54
VSTM1-205ENST00000425006 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
VSTM1-205ENST00000425006 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
VSTM1-205ENST00000425006 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
VSTM1-205ENST00000425006 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
VSTM1-205ENST00000425006 MEX3CQ5U5Q3 659 aaKnown RBP18.39■□□□□ 0.53
VSTM1-205ENST00000425006 LTKP29376 864 aa18.38■□□□□ 0.53
VSTM1-205ENST00000425006 TXNDC2Q86VQ3 553 aa18.38■□□□□ 0.53
VSTM1-205ENST00000425006 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
VSTM1-205ENST00000425006 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
VSTM1-205ENST00000425006 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
VSTM1-205ENST00000425006 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
VSTM1-205ENST00000425006 RXRBP28702 533 aa18.35■□□□□ 0.53
VSTM1-205ENST00000425006 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
VSTM1-205ENST00000425006 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
VSTM1-205ENST00000425006 LRP6O75581 1613 aa18.34■□□□□ 0.53
VSTM1-205ENST00000425006 ERVK-7P63135 1459 aa18.33■□□□□ 0.53
VSTM1-205ENST00000425006 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
VSTM1-205ENST00000425006 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.52
VSTM1-205ENST00000425006 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
VSTM1-205ENST00000425006 EID1Q9Y6B2 187 aa18.32■□□□□ 0.52
VSTM1-205ENST00000425006 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
VSTM1-205ENST00000425006 SPATA31A6Q5VVP1 1343 aa18.31■□□□□ 0.52
VSTM1-205ENST00000425006 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
VSTM1-205ENST00000425006 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
VSTM1-205ENST00000425006 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
VSTM1-205ENST00000425006 SLIT1O75093 1534 aa18.3■□□□□ 0.52
VSTM1-205ENST00000425006 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
VSTM1-205ENST00000425006 KCNA6P17658 529 aa18.29■□□□□ 0.52
VSTM1-205ENST00000425006 ABCC3O15438 1527 aa18.28■□□□□ 0.52
VSTM1-205ENST00000425006 MSH6P52701 1360 aa18.28■□□□□ 0.52
VSTM1-205ENST00000425006 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.51
VSTM1-205ENST00000425006 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
VSTM1-205ENST00000425006 CCDC141Q6ZP82 1450 aa18.26■□□□□ 0.51
VSTM1-205ENST00000425006 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
VSTM1-205ENST00000425006 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
VSTM1-205ENST00000425006 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
VSTM1-205ENST00000425006 SLC26A8Q96RN1 970 aa18.23■□□□□ 0.51
VSTM1-205ENST00000425006 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
VSTM1-205ENST00000425006 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
VSTM1-205ENST00000425006 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
VSTM1-205ENST00000425006 NUTM2BA6NNL0 878 aaPredicted RBP18.2■□□□□ 0.5
VSTM1-205ENST00000425006 NUTM2EB1AL46 878 aaPredicted RBP18.2■□□□□ 0.5
VSTM1-205ENST00000425006 NUTM2DQ5VT03 806 aaPredicted RBP18.2■□□□□ 0.5
VSTM1-205ENST00000425006 NUTM2AQ8IVF1 878 aaPredicted RBP18.2■□□□□ 0.5
VSTM1-205ENST00000425006 CFAP65Q6ZU64 1925 aaKnown RBP18.19■□□□□ 0.5
VSTM1-205ENST00000425006 AFF2P51816 1311 aa18.19■□□□□ 0.5
VSTM1-205ENST00000425006 RGS12O14924 1447 aa18.18■□□□□ 0.5
VSTM1-205ENST00000425006 FOXD1Q16676 465 aa18.18■□□□□ 0.5
VSTM1-205ENST00000425006 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
VSTM1-205ENST00000425006 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
VSTM1-205ENST00000425006 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
VSTM1-205ENST00000425006 CAMSAP2Q08AD1 1489 aa18.15■□□□□ 0.5
VSTM1-205ENST00000425006 TSPY4P0CV99 314 aa18.15■□□□□ 0.5
VSTM1-205ENST00000425006 TSPY10P0CW01 314 aa18.15■□□□□ 0.5
VSTM1-205ENST00000425006 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
VSTM1-205ENST00000425006 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
VSTM1-205ENST00000425006 TET3O43151 1660 aa18.14■□□□□ 0.49
VSTM1-205ENST00000425006 CEP152O94986 1710 aa18.14■□□□□ 0.49
VSTM1-205ENST00000425006 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
VSTM1-205ENST00000425006 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
VSTM1-205ENST00000425006 RBM6P78332 1123 aaKnown RBP18.13■□□□□ 0.49
VSTM1-205ENST00000425006 BCANQ96GW7 911 aa18.12■□□□□ 0.49
VSTM1-205ENST00000425006 QTRT2Q9H974 415 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms