RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
SHANK2-206ENST00000424924 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
SHANK2-206ENST00000424924 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
SHANK2-206ENST00000424924 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SHANK2-206ENST00000424924 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-206ENST00000424924 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-206ENST00000424924 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
SHANK2-206ENST00000424924 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
SHANK2-206ENST00000424924 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
SHANK2-206ENST00000424924 NUP155O75694 1391 aa13.17□□□□□ -0.3
SHANK2-206ENST00000424924 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
SHANK2-206ENST00000424924 MSNP26038 577 aaKnown RBP13.16□□□□□ -0.3
SHANK2-206ENST00000424924 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-206ENST00000424924 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
SHANK2-206ENST00000424924 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
SHANK2-206ENST00000424924 KTN1Q86UP2 1357 aaKnown RBP13.16□□□□□ -0.3
SHANK2-206ENST00000424924 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
SHANK2-206ENST00000424924 PSME1Q06323 249 aa13.15□□□□□ -0.3
SHANK2-206ENST00000424924 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
SHANK2-206ENST00000424924 FYB1O15117 783 aa13.15□□□□□ -0.3
SHANK2-206ENST00000424924 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
SHANK2-206ENST00000424924 MTMR7Q9Y216 660 aa13.15□□□□□ -0.3
SHANK2-206ENST00000424924 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
SHANK2-206ENST00000424924 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
SHANK2-206ENST00000424924 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
SHANK2-206ENST00000424924 CALD1Q05682 793 aaKnown RBP13.14□□□□□ -0.31
SHANK2-206ENST00000424924 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-206ENST00000424924 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-206ENST00000424924 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-206ENST00000424924 CCDC88BA6NC98 1476 aa13.14□□□□□ -0.31
SHANK2-206ENST00000424924 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
SHANK2-206ENST00000424924 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
SHANK2-206ENST00000424924 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
SHANK2-206ENST00000424924 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
SHANK2-206ENST00000424924 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-206ENST00000424924 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
SHANK2-206ENST00000424924 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-206ENST00000424924 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
SHANK2-206ENST00000424924 KDM4AO75164 1064 aa13.12□□□□□ -0.31
SHANK2-206ENST00000424924 APPP05067 770 aa13.11□□□□□ -0.31
SHANK2-206ENST00000424924 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
SHANK2-206ENST00000424924 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
SHANK2-206ENST00000424924 FOSBP53539 338 aa13.1□□□□□ -0.31
SHANK2-206ENST00000424924 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
SHANK2-206ENST00000424924 TPD52L1Q16890 204 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-206ENST00000424924 WIZO95785 1651 aa13.09□□□□□ -0.31
SHANK2-206ENST00000424924 PLIN1O60240 522 aa13.09□□□□□ -0.31
SHANK2-206ENST00000424924 TPM4P67936 248 aa13.08□□□□□ -0.32
SHANK2-206ENST00000424924 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
SHANK2-206ENST00000424924 ATF3P18847 181 aa13.08□□□□□ -0.32
SHANK2-206ENST00000424924 TEFQ10587 303 aa13.08□□□□□ -0.32
SHANK2-206ENST00000424924 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
SHANK2-206ENST00000424924 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
SHANK2-206ENST00000424924 MPHOSPH9Q99550 1183 aa13.07□□□□□ -0.32
SHANK2-206ENST00000424924 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
SHANK2-206ENST00000424924 COG3Q96JB2 828 aa13.07□□□□□ -0.32
SHANK2-206ENST00000424924 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
SHANK2-206ENST00000424924 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-206ENST00000424924 H3BQV1 296 aa13.06□□□□□ -0.32
SHANK2-206ENST00000424924 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
SHANK2-206ENST00000424924 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
SHANK2-206ENST00000424924 HMMRO75330 724 aa13.05□□□□□ -0.32
SHANK2-206ENST00000424924 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
SHANK2-206ENST00000424924 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
SHANK2-206ENST00000424924 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
SHANK2-206ENST00000424924 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
SHANK2-206ENST00000424924 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
SHANK2-206ENST00000424924 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
SHANK2-206ENST00000424924 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
SHANK2-206ENST00000424924 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
SHANK2-206ENST00000424924 C9orf78Q9NZ63 289 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-206ENST00000424924 KIF16BQ96L93 1317 aa13.03□□□□□ -0.32
SHANK2-206ENST00000424924 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-206ENST00000424924 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.32
SHANK2-206ENST00000424924 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-206ENST00000424924 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.33
SHANK2-206ENST00000424924 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
SHANK2-206ENST00000424924 CCDC43Q96MW1 224 aaKnown RBP13.01□□□□□ -0.33
SHANK2-206ENST00000424924 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-206ENST00000424924 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
SHANK2-206ENST00000424924 SYNE3Q6ZMZ3 975 aa13□□□□□ -0.33
SHANK2-206ENST00000424924 CCDC34Q96HJ3 373 aa13□□□□□ -0.33
SHANK2-206ENST00000424924 ANKRD45Q5TZF3 282 aa13□□□□□ -0.33
SHANK2-206ENST00000424924 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
SHANK2-206ENST00000424924 GBP4Q96PP9 640 aa13□□□□□ -0.33
SHANK2-206ENST00000424924 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
SHANK2-206ENST00000424924 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
SHANK2-206ENST00000424924 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
SHANK2-206ENST00000424924 CFAP44Q96MT7 982 aa12.99□□□□□ -0.33
SHANK2-206ENST00000424924 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
SHANK2-206ENST00000424924 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
SHANK2-206ENST00000424924 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
SHANK2-206ENST00000424924 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
SHANK2-206ENST00000424924 SETD5Q9C0A6 1442 aa12.98□□□□□ -0.33
SHANK2-206ENST00000424924 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
SHANK2-206ENST00000424924 TPM3P06753 285 aa12.97□□□□□ -0.33
SHANK2-206ENST00000424924 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
SHANK2-206ENST00000424924 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
SHANK2-206ENST00000424924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHANK2-206ENST00000424924 CENPJQ9HC77 1338 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms