RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
PUDP-203ENST00000424830 POLR1AO95602 1720 aaPredicted RBP25.92■■□□□ 1.74
PUDP-203ENST00000424830 KDM5DQ9BY66 1539 aa25.91■■□□□ 1.74
PUDP-203ENST00000424830 KIF3BO15066 747 aa25.9■■□□□ 1.74
PUDP-203ENST00000424830 TNRQ92752 1358 aa25.9■■□□□ 1.74
PUDP-203ENST00000424830 PZPP20742 1482 aa25.89■■□□□ 1.73
PUDP-203ENST00000424830 CAMSAP2Q08AD1 1489 aa25.89■■□□□ 1.73
PUDP-203ENST00000424830 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
PUDP-203ENST00000424830 NCOA2Q15596 1464 aa25.86■■□□□ 1.73
PUDP-203ENST00000424830 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
PUDP-203ENST00000424830 CPS1P31327 1500 aa25.85■■□□□ 1.73
PUDP-203ENST00000424830 FBXO31Q5XUX0 539 aaPredicted RBP25.85■■□□□ 1.73
PUDP-203ENST00000424830 NEURL4Q96JN8 1562 aa25.85■■□□□ 1.73
PUDP-203ENST00000424830 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
PUDP-203ENST00000424830 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
PUDP-203ENST00000424830 ARHGEF5Q12774 1597 aa25.8■■□□□ 1.72
PUDP-203ENST00000424830 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
PUDP-203ENST00000424830 ANKLE2Q86XL3 938 aa25.79■■□□□ 1.72
PUDP-203ENST00000424830 TOM1O60784 492 aa25.78■■□□□ 1.72
PUDP-203ENST00000424830 TSPY4P0CV99 314 aa25.78■■□□□ 1.72
PUDP-203ENST00000424830 TSPY10P0CW01 314 aa25.78■■□□□ 1.72
PUDP-203ENST00000424830 THEMISQ8N1K5 641 aaPredicted RBP25.78■■□□□ 1.72
PUDP-203ENST00000424830 MIA2Q96PC5 1412 aa25.78■■□□□ 1.72
PUDP-203ENST00000424830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.77■■□□□ 1.72
PUDP-203ENST00000424830 UGGT1Q9NYU2 1555 aa25.77■■□□□ 1.72
PUDP-203ENST00000424830 PIP4K2BP78356 416 aa25.76■■□□□ 1.71
PUDP-203ENST00000424830 DEPDC5O75140 1603 aa25.73■■□□□ 1.71
PUDP-203ENST00000424830 VWDEQ8N2E2 1590 aa25.72■■□□□ 1.71
PUDP-203ENST00000424830 HSPA1LP34931 641 aa25.72■■□□□ 1.71
PUDP-203ENST00000424830 NPHP4O75161 1426 aaPredicted RBP25.72■■□□□ 1.71
PUDP-203ENST00000424830 ZC3H13Q5T200 1668 aaKnown RBP25.72■■□□□ 1.71
PUDP-203ENST00000424830 RNF17Q9BXT8 1623 aaKnown RBP25.72■■□□□ 1.71
PUDP-203ENST00000424830 MED14O60244 1454 aa25.71■■□□□ 1.71
PUDP-203ENST00000424830 IQGAP1P46940 1657 aa25.69■■□□□ 1.7
PUDP-203ENST00000424830 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
PUDP-203ENST00000424830 MAST1Q9Y2H9 1570 aa25.68■■□□□ 1.7
PUDP-203ENST00000424830 ABCC3O15438 1527 aa25.67■■□□□ 1.7
PUDP-203ENST00000424830 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
PUDP-203ENST00000424830 LRRC9Q6ZRR7 1453 aa25.65■■□□□ 1.7
PUDP-203ENST00000424830 ERVK-7P63135 1459 aa25.62■■□□□ 1.69
PUDP-203ENST00000424830 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
PUDP-203ENST00000424830 SYNMO15061 1565 aa25.59■■□□□ 1.69
PUDP-203ENST00000424830 CEP152O94986 1710 aa25.58■■□□□ 1.68
PUDP-203ENST00000424830 MROH1Q8NDA8 1641 aa25.57■■□□□ 1.68
PUDP-203ENST00000424830 ALKQ9UM73 1620 aa25.57■■□□□ 1.68
PUDP-203ENST00000424830 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
PUDP-203ENST00000424830 LRRC7Q96NW7 1537 aa25.55■■□□□ 1.68
PUDP-203ENST00000424830 DUOX2Q9NRD8 1548 aa25.55■■□□□ 1.68
PUDP-203ENST00000424830 UBR1Q8IWV7 1749 aa25.55■■□□□ 1.68
PUDP-203ENST00000424830 MYOM3Q5VTT5 1437 aa25.55■■□□□ 1.68
PUDP-203ENST00000424830 CFAP65Q6ZU64 1925 aaKnown RBP25.54■■□□□ 1.68
PUDP-203ENST00000424830 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
PUDP-203ENST00000424830 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
PUDP-203ENST00000424830 SCAF11Q99590 1463 aaKnown RBP25.52■■□□□ 1.68
PUDP-203ENST00000424830 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
PUDP-203ENST00000424830 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
PUDP-203ENST00000424830 KIF15Q9NS87 1388 aa25.47■■□□□ 1.67
PUDP-203ENST00000424830 SLIT1O75093 1534 aa25.46■■□□□ 1.67
PUDP-203ENST00000424830 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
PUDP-203ENST00000424830 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
PUDP-203ENST00000424830 SENP3Q9H4L4 574 aaPredicted RBP25.45■■□□□ 1.66
PUDP-203ENST00000424830 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
PUDP-203ENST00000424830 ARHGAP23Q9P227 1491 aa25.44■■□□□ 1.66
PUDP-203ENST00000424830 TXNDC2Q86VQ3 553 aa25.43■■□□□ 1.66
PUDP-203ENST00000424830 EID1Q9Y6B2 187 aa25.42■■□□□ 1.66
PUDP-203ENST00000424830 LTKP29376 864 aa25.41■■□□□ 1.66
PUDP-203ENST00000424830 KANK1Q14678 1352 aa25.39■■□□□ 1.65
PUDP-203ENST00000424830 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
PUDP-203ENST00000424830 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
PUDP-203ENST00000424830 PIK3C2BO00750 1634 aa25.38■■□□□ 1.65
PUDP-203ENST00000424830 PTPN23Q9H3S7 1636 aa25.38■■□□□ 1.65
PUDP-203ENST00000424830 ABCC5O15440 1437 aa25.38■■□□□ 1.65
PUDP-203ENST00000424830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
PUDP-203ENST00000424830 STAG3Q9UJ98 1225 aa25.37■■□□□ 1.65
PUDP-203ENST00000424830 XIRP1Q702N8 1843 aaKnown RBP25.36■■□□□ 1.65
PUDP-203ENST00000424830 TMEM2Q9UHN6 1383 aa25.35■■□□□ 1.65
PUDP-203ENST00000424830 KDM5AP29375 1690 aaKnown RBP25.34■■□□□ 1.65
PUDP-203ENST00000424830 DAPK1P53355 1430 aa25.34■■□□□ 1.65
PUDP-203ENST00000424830 APLP2Q06481 763 aa25.33■■□□□ 1.64
PUDP-203ENST00000424830 EFCAB6Q5THR3 1501 aa25.33■■□□□ 1.64
PUDP-203ENST00000424830 LMTK2Q8IWU2 1503 aa25.29■■□□□ 1.64
PUDP-203ENST00000424830 ANKRD30AQ9BXX3 1397 aa25.29■■□□□ 1.64
PUDP-203ENST00000424830 FGD6Q6ZV73 1430 aa25.27■■□□□ 1.64
PUDP-203ENST00000424830 FAM135BQ49AJ0 1406 aa25.26■■□□□ 1.63
PUDP-203ENST00000424830 TMEM94Q12767 1356 aa25.25■■□□□ 1.63
PUDP-203ENST00000424830 IDI1Q13907 227 aa25.25■■□□□ 1.63
PUDP-203ENST00000424830 KCNA6P17658 529 aa25.23■■□□□ 1.63
PUDP-203ENST00000424830 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
PUDP-203ENST00000424830 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
PUDP-203ENST00000424830 TET3O43151 1660 aa25.21■■□□□ 1.63
PUDP-203ENST00000424830 SLC26A8Q96RN1 970 aa25.2■■□□□ 1.62
PUDP-203ENST00000424830 ROBO1Q9Y6N7 1651 aa25.2■■□□□ 1.62
PUDP-203ENST00000424830 NOS1P29475 1434 aa25.19■■□□□ 1.62
PUDP-203ENST00000424830 PROSER2Q86WR7 435 aaPredicted RBP25.19■■□□□ 1.62
PUDP-203ENST00000424830 RGS17Q9UGC6 210 aaPredicted RBP25.19■■□□□ 1.62
PUDP-203ENST00000424830 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
PUDP-203ENST00000424830 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
PUDP-203ENST00000424830 NWD1Q149M9 1564 aa25.17■■□□□ 1.62
PUDP-203ENST00000424830 BCANQ96GW7 911 aa25.16■■□□□ 1.62
PUDP-203ENST00000424830 ADGRL2O95490 1459 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms