RNA–Protein interactions for RNA: ENST00000424600.5

AFF3-207, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-207ENST00000424600 KDM5DQ9BY66 1539 aa24.41■■□□□ 1.5
AFF3-207ENST00000424600 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
AFF3-207ENST00000424600 NPATQ14207 1427 aa24.4■■□□□ 1.5
AFF3-207ENST00000424600 ESF1Q9H501 851 aaKnown RBP24.39■■□□□ 1.49
AFF3-207ENST00000424600 PTPRKQ15262 1439 aa24.38■■□□□ 1.49
AFF3-207ENST00000424600 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
AFF3-207ENST00000424600 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
AFF3-207ENST00000424600 DEPDC5O75140 1603 aa24.37■■□□□ 1.49
AFF3-207ENST00000424600 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
AFF3-207ENST00000424600 ZC3H13Q5T200 1668 aaKnown RBP24.36■■□□□ 1.49
AFF3-207ENST00000424600 ABCC3O15438 1527 aa24.35■■□□□ 1.49
AFF3-207ENST00000424600 PRDM15P57071 1507 aaPredicted RBP24.35■■□□□ 1.49
AFF3-207ENST00000424600 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
AFF3-207ENST00000424600 HSPA2P54652 639 aa24.34■■□□□ 1.49
AFF3-207ENST00000424600 CEP152O94986 1710 aa24.32■■□□□ 1.48
AFF3-207ENST00000424600 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
AFF3-207ENST00000424600 ANKRD30AQ9BXX3 1397 aa24.32■■□□□ 1.48
AFF3-207ENST00000424600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.32■■□□□ 1.48
AFF3-207ENST00000424600 ZNF142P52746 1687 aaPredicted RBP24.32■■□□□ 1.48
AFF3-207ENST00000424600 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
AFF3-207ENST00000424600 RRP7BPQ9NSQ0 103 aa24.32■■□□□ 1.48
AFF3-207ENST00000424600 PZPP20742 1482 aa24.32■■□□□ 1.48
AFF3-207ENST00000424600 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
AFF3-207ENST00000424600 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
AFF3-207ENST00000424600 RRBP1Q9P2E9 1410 aaKnown RBP24.28■■□□□ 1.48
AFF3-207ENST00000424600 VWDEQ8N2E2 1590 aa24.28■■□□□ 1.48
AFF3-207ENST00000424600 WASHC2CQ9Y4E1 1318 aa24.27■■□□□ 1.48
AFF3-207ENST00000424600 CAMSAP1Q5T5Y3 1602 aa24.27■■□□□ 1.48
AFF3-207ENST00000424600 CEP170BQ9Y4F5 1589 aaPredicted RBP24.25■■□□□ 1.47
AFF3-207ENST00000424600 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
AFF3-207ENST00000424600 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
AFF3-207ENST00000424600 FBXO31Q5XUX0 539 aaPredicted RBP24.22■■□□□ 1.47
AFF3-207ENST00000424600 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.47
AFF3-207ENST00000424600 ANKRD50Q9ULJ7 1429 aa24.19■■□□□ 1.46
AFF3-207ENST00000424600 ARHGAP31Q2M1Z3 1444 aa24.18■■□□□ 1.46
AFF3-207ENST00000424600 CFAP65Q6ZU64 1925 aaKnown RBP24.18■■□□□ 1.46
AFF3-207ENST00000424600 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
AFF3-207ENST00000424600 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
AFF3-207ENST00000424600 TNRQ92752 1358 aa24.16■■□□□ 1.46
AFF3-207ENST00000424600 UNC13BO14795 1591 aa24.16■■□□□ 1.46
AFF3-207ENST00000424600 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
AFF3-207ENST00000424600 NLRP1Q9C000 1473 aa24.12■■□□□ 1.45
AFF3-207ENST00000424600 EFCAB6Q5THR3 1501 aa24.11■■□□□ 1.45
AFF3-207ENST00000424600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.45
AFF3-207ENST00000424600 KANK1Q14678 1352 aa24.07■■□□□ 1.44
AFF3-207ENST00000424600 TET3O43151 1660 aa24.07■■□□□ 1.44
AFF3-207ENST00000424600 PTPRTO14522 1441 aa24.07■■□□□ 1.44
AFF3-207ENST00000424600 ITGAEP38570 1179 aa24.06■■□□□ 1.44
AFF3-207ENST00000424600 IQGAP3Q86VI3 1631 aa24.05■■□□□ 1.44
AFF3-207ENST00000424600 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
AFF3-207ENST00000424600 UBR1Q8IWV7 1749 aa24.04■■□□□ 1.44
AFF3-207ENST00000424600 SYNMO15061 1565 aa24.04■■□□□ 1.44
AFF3-207ENST00000424600 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
AFF3-207ENST00000424600 UGGT1Q9NYU2 1555 aa24.03■■□□□ 1.44
AFF3-207ENST00000424600 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
AFF3-207ENST00000424600 NOS1P29475 1434 aa24.02■■□□□ 1.44
AFF3-207ENST00000424600 NAIPQ13075 1403 aa24.01■■□□□ 1.43
AFF3-207ENST00000424600 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
AFF3-207ENST00000424600 E9PCH4 1651 aa23.99■■□□□ 1.43
AFF3-207ENST00000424600 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
AFF3-207ENST00000424600 NCKAP5LQ9HCH0 1330 aa23.98■■□□□ 1.43
AFF3-207ENST00000424600 PIK3C2BO00750 1634 aa23.98■■□□□ 1.43
AFF3-207ENST00000424600 KDM5AP29375 1690 aaKnown RBP23.97■■□□□ 1.43
AFF3-207ENST00000424600 PKD2Q13563 968 aa23.97■■□□□ 1.43
AFF3-207ENST00000424600 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
AFF3-207ENST00000424600 LTBP4Q8N2S1 1624 aa23.94■■□□□ 1.42
AFF3-207ENST00000424600 ARHGAP23Q9P227 1491 aa23.93■■□□□ 1.42
AFF3-207ENST00000424600 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
AFF3-207ENST00000424600 SLIT1O75093 1534 aa23.92■■□□□ 1.42
AFF3-207ENST00000424600 MED14O60244 1454 aa23.92■■□□□ 1.42
AFF3-207ENST00000424600 NUP155O75694 1391 aa23.9■■□□□ 1.42
AFF3-207ENST00000424600 IDI1Q13907 227 aa23.88■■□□□ 1.41
AFF3-207ENST00000424600 MYO5BQ9ULV0 1848 aa23.87■■□□□ 1.41
AFF3-207ENST00000424600 ADGRB3O60242 1522 aa23.87■■□□□ 1.41
AFF3-207ENST00000424600 IQGAP1P46940 1657 aa23.86■■□□□ 1.41
AFF3-207ENST00000424600 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
AFF3-207ENST00000424600 ILDR1Q86SU0 546 aaPredicted RBP23.83■■□□□ 1.41
AFF3-207ENST00000424600 TMEM131LA2VDJ0 1609 aa23.83■■□□□ 1.41
AFF3-207ENST00000424600 SPHKAPQ2M3C7 1700 aa23.82■■□□□ 1.4
AFF3-207ENST00000424600 CERKQ8TCT0 537 aa23.82■■□□□ 1.4
AFF3-207ENST00000424600 SLC52A1Q9NWF4 448 aa23.82■■□□□ 1.4
AFF3-207ENST00000424600 NPHP4O75161 1426 aaPredicted RBP23.82■■□□□ 1.4
AFF3-207ENST00000424600 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
AFF3-207ENST00000424600 TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
AFF3-207ENST00000424600 LTKP29376 864 aa23.8■■□□□ 1.4
AFF3-207ENST00000424600 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
AFF3-207ENST00000424600 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
AFF3-207ENST00000424600 FBXO41Q8TF61 875 aa23.76■■□□□ 1.39
AFF3-207ENST00000424600 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
AFF3-207ENST00000424600 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
AFF3-207ENST00000424600 TRPM2O94759 1503 aa23.72■■□□□ 1.39
AFF3-207ENST00000424600 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
AFF3-207ENST00000424600 CLTCL1P53675 1640 aa23.7■■□□□ 1.39
AFF3-207ENST00000424600 STAG3Q9UJ98 1225 aa23.68■■□□□ 1.38
AFF3-207ENST00000424600 CPS1P31327 1500 aa23.68■■□□□ 1.38
AFF3-207ENST00000424600 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
AFF3-207ENST00000424600 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
AFF3-207ENST00000424600 RIMS2Q9UQ26 1411 aa23.65■■□□□ 1.38
AFF3-207ENST00000424600 TRIM52Q96A61 297 aa23.62■■□□□ 1.37
AFF3-207ENST00000424600 KIF1BO60333 1816 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms