RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 KIF15Q9NS87 1388 aa28.68■■■□□ 2.18
PRNP-202ENST00000424424 RRP7BPQ9NSQ0 103 aa28.68■■■□□ 2.18
PRNP-202ENST00000424424 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
PRNP-202ENST00000424424 LMTK3Q96Q04 1460 aa28.67■■■□□ 2.18
PRNP-202ENST00000424424 FAM135AQ9P2D6 1515 aa28.65■■■□□ 2.18
PRNP-202ENST00000424424 RNF17Q9BXT8 1623 aaKnown RBP28.63■■■□□ 2.17
PRNP-202ENST00000424424 KDM5DQ9BY66 1539 aa28.62■■■□□ 2.17
PRNP-202ENST00000424424 WASHC2CQ9Y4E1 1318 aa28.62■■■□□ 2.17
PRNP-202ENST00000424424 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
PRNP-202ENST00000424424 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
PRNP-202ENST00000424424 NPATQ14207 1427 aa28.6■■■□□ 2.17
PRNP-202ENST00000424424 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
PRNP-202ENST00000424424 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
PRNP-202ENST00000424424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.58■■■□□ 2.17
PRNP-202ENST00000424424 ZC3H13Q5T200 1668 aaKnown RBP28.56■■■□□ 2.16
PRNP-202ENST00000424424 HSPA2P54652 639 aa28.54■■■□□ 2.16
PRNP-202ENST00000424424 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
PRNP-202ENST00000424424 MROH1Q8NDA8 1641 aa28.51■■■□□ 2.15
PRNP-202ENST00000424424 ITGAEP38570 1179 aa28.5■■■□□ 2.15
PRNP-202ENST00000424424 FBXO41Q8TF61 875 aa28.5■■■□□ 2.15
PRNP-202ENST00000424424 RRBP1Q9P2E9 1410 aaKnown RBP28.49■■■□□ 2.15
PRNP-202ENST00000424424 CEP152O94986 1710 aa28.49■■■□□ 2.15
PRNP-202ENST00000424424 ABCC3O15438 1527 aa28.48■■■□□ 2.15
PRNP-202ENST00000424424 PZPP20742 1482 aa28.48■■■□□ 2.15
PRNP-202ENST00000424424 PRDM15P57071 1507 aaPredicted RBP28.48■■■□□ 2.15
PRNP-202ENST00000424424 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
PRNP-202ENST00000424424 KANK1Q14678 1352 aa28.47■■■□□ 2.15
PRNP-202ENST00000424424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.46■■■□□ 2.15
PRNP-202ENST00000424424 ROCK1Q13464 1354 aa28.46■■■□□ 2.15
PRNP-202ENST00000424424 ANKRD50Q9ULJ7 1429 aa28.45■■■□□ 2.15
PRNP-202ENST00000424424 MYO3AQ8NEV4 1616 aa28.44■■■□□ 2.14
PRNP-202ENST00000424424 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
PRNP-202ENST00000424424 FBXO31Q5XUX0 539 aaPredicted RBP28.42■■■□□ 2.14
PRNP-202ENST00000424424 ZNF142P52746 1687 aaPredicted RBP28.4■■■□□ 2.14
PRNP-202ENST00000424424 TNRQ92752 1358 aa28.39■■■□□ 2.14
PRNP-202ENST00000424424 CFAP65Q6ZU64 1925 aaKnown RBP28.39■■■□□ 2.13
PRNP-202ENST00000424424 CEP170BQ9Y4F5 1589 aaPredicted RBP28.37■■■□□ 2.13
PRNP-202ENST00000424424 VWDEQ8N2E2 1590 aa28.33■■■□□ 2.13
PRNP-202ENST00000424424 STRCQ7RTU9 1775 aa28.33■■■□□ 2.13
PRNP-202ENST00000424424 ARHGAP31Q2M1Z3 1444 aa28.33■■■□□ 2.13
PRNP-202ENST00000424424 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
PRNP-202ENST00000424424 DMRT2Q9Y5R5 561 aa28.32■■■□□ 2.12
PRNP-202ENST00000424424 LMTK2Q8IWU2 1503 aa28.32■■■□□ 2.12
PRNP-202ENST00000424424 SPATA31D1Q6ZQQ2 1576 aa28.32■■■□□ 2.12
PRNP-202ENST00000424424 ERVK-7P63135 1459 aa28.3■■■□□ 2.12
PRNP-202ENST00000424424 NLRP1Q9C000 1473 aa28.3■■■□□ 2.12
PRNP-202ENST00000424424 UNC13BO14795 1591 aa28.28■■■□□ 2.12
PRNP-202ENST00000424424 EFCAB6Q5THR3 1501 aa28.23■■■□□ 2.11
PRNP-202ENST00000424424 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
PRNP-202ENST00000424424 TET3O43151 1660 aa28.22■■■□□ 2.11
PRNP-202ENST00000424424 UGGT1Q9NYU2 1555 aa28.21■■■□□ 2.11
PRNP-202ENST00000424424 THEMISQ8N1K5 641 aaPredicted RBP28.21■■■□□ 2.11
PRNP-202ENST00000424424 GCC2Q8IWJ2 1684 aa28.2■■■□□ 2.11
PRNP-202ENST00000424424 PKD2Q13563 968 aa28.2■■■□□ 2.1
PRNP-202ENST00000424424 PTPRTO14522 1441 aa28.18■■■□□ 2.1
PRNP-202ENST00000424424 IQGAP3Q86VI3 1631 aa28.18■■■□□ 2.1
PRNP-202ENST00000424424 RPRD2Q5VT52 1461 aaKnown RBP28.17■■■□□ 2.1
PRNP-202ENST00000424424 NUP155O75694 1391 aa28.17■■■□□ 2.1
PRNP-202ENST00000424424 NAIPQ13075 1403 aa28.17■■■□□ 2.1
PRNP-202ENST00000424424 NCKAP5LQ9HCH0 1330 aa28.17■■■□□ 2.1
PRNP-202ENST00000424424 POLR1AO95602 1720 aaPredicted RBP28.13■■■□□ 2.09
PRNP-202ENST00000424424 HFM1A2PYH4 1435 aa28.13■■■□□ 2.09
PRNP-202ENST00000424424 UBR1Q8IWV7 1749 aa28.12■■■□□ 2.09
PRNP-202ENST00000424424 NOS1P29475 1434 aa28.1■■■□□ 2.09
PRNP-202ENST00000424424 ANKLE2Q86XL3 938 aa28.1■■■□□ 2.09
PRNP-202ENST00000424424 E9PCH4 1651 aa28.1■■■□□ 2.09
PRNP-202ENST00000424424 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
PRNP-202ENST00000424424 STAG3Q9UJ98 1225 aa28.09■■■□□ 2.09
PRNP-202ENST00000424424 SYNMO15061 1565 aa28.08■■■□□ 2.09
PRNP-202ENST00000424424 PIK3C2BO00750 1634 aa28.08■■■□□ 2.09
PRNP-202ENST00000424424 SLC52A1Q9NWF4 448 aa28.07■■■□□ 2.08
PRNP-202ENST00000424424 KDM5AP29375 1690 aaKnown RBP28.06■■■□□ 2.08
PRNP-202ENST00000424424 IDI1Q13907 227 aa28.05■■■□□ 2.08
PRNP-202ENST00000424424 TRIM52Q96A61 297 aa28.02■■■□□ 2.08
PRNP-202ENST00000424424 NEURL4Q96JN8 1562 aa28■■■□□ 2.07
PRNP-202ENST00000424424 SLIT1O75093 1534 aa27.97■■■□□ 2.07
PRNP-202ENST00000424424 EID1Q9Y6B2 187 aa27.97■■■□□ 2.07
PRNP-202ENST00000424424 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
PRNP-202ENST00000424424 MED14O60244 1454 aa27.96■■■□□ 2.07
PRNP-202ENST00000424424 ARHGAP23Q9P227 1491 aa27.95■■■□□ 2.07
PRNP-202ENST00000424424 NPHP4O75161 1426 aaPredicted RBP27.95■■■□□ 2.07
PRNP-202ENST00000424424 IQGAP1P46940 1657 aa27.94■■■□□ 2.06
PRNP-202ENST00000424424 TXNDC2Q86VQ3 553 aa27.94■■■□□ 2.06
PRNP-202ENST00000424424 SPHKAPQ2M3C7 1700 aa27.94■■■□□ 2.06
PRNP-202ENST00000424424 SCAF11Q99590 1463 aaKnown RBP27.94■■■□□ 2.06
PRNP-202ENST00000424424 TMEM2Q9UHN6 1383 aa27.93■■■□□ 2.06
PRNP-202ENST00000424424 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
PRNP-202ENST00000424424 MYO5BQ9ULV0 1848 aa27.91■■■□□ 2.06
PRNP-202ENST00000424424 CHGAP10645 457 aaKnown RBP27.89■■■□□ 2.06
PRNP-202ENST00000424424 LTKP29376 864 aa27.89■■■□□ 2.06
PRNP-202ENST00000424424 SLC4A1APQ9BWU0 796 aaKnown RBP27.89■■■□□ 2.06
PRNP-202ENST00000424424 ZNF335Q9H4Z2 1342 aaPredicted RBP27.89■■■□□ 2.05
PRNP-202ENST00000424424 TMEM131LA2VDJ0 1609 aa27.89■■■□□ 2.05
PRNP-202ENST00000424424 LTBP4Q8N2S1 1624 aa27.89■■■□□ 2.05
PRNP-202ENST00000424424 SETD5Q9C0A6 1442 aa27.88■■■□□ 2.05
PRNP-202ENST00000424424 HDGFP51858 240 aaKnown RBP27.86■■■□□ 2.05
PRNP-202ENST00000424424 TRPM2O94759 1503 aa27.8■■■□□ 2.04
PRNP-202ENST00000424424 RIMS2Q9UQ26 1411 aa27.78■■■□□ 2.04
PRNP-202ENST00000424424 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
PRNP-202ENST00000424424 KIF1BO60333 1816 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms