RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 A2MP01023 1474 aa10.58□□□□□ -0.72
SDCBP-203ENST00000424270 HNRNPMP52272 730 aaKnown RBP eCLIP10.57□□□□□ -0.72
SDCBP-203ENST00000424270 ZNF772Q68DY9 489 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-203ENST00000424270 IQGAP1P46940 1657 aa10.57□□□□□ -0.72
SDCBP-203ENST00000424270 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
SDCBP-203ENST00000424270 CDC42BPBQ9Y5S2 1711 aa10.56□□□□□ -0.72
SDCBP-203ENST00000424270 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
SDCBP-203ENST00000424270 FMN1Q68DA7 1419 aa10.56□□□□□ -0.72
SDCBP-203ENST00000424270 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
SDCBP-203ENST00000424270 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
SDCBP-203ENST00000424270 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
SDCBP-203ENST00000424270 RXRBP28702 533 aa10.55□□□□□ -0.72
SDCBP-203ENST00000424270 FAM135BQ49AJ0 1406 aa10.54□□□□□ -0.72
SDCBP-203ENST00000424270 MED14O60244 1454 aa10.54□□□□□ -0.72
SDCBP-203ENST00000424270 WASHC2CQ9Y4E1 1318 aa10.54□□□□□ -0.72
SDCBP-203ENST00000424270 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
SDCBP-203ENST00000424270 JCADQ9P266 1359 aa10.52□□□□□ -0.72
SDCBP-203ENST00000424270 DEPDC5O75140 1603 aa10.52□□□□□ -0.73
SDCBP-203ENST00000424270 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SDCBP-203ENST00000424270 NLRP1Q9C000 1473 aa10.51□□□□□ -0.73
SDCBP-203ENST00000424270 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-203ENST00000424270 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-203ENST00000424270 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-203ENST00000424270 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-203ENST00000424270 STRCP1A6NGW2 1772 aa10.51□□□□□ -0.73
SDCBP-203ENST00000424270 PLXNC1O60486 1568 aa10.51□□□□□ -0.73
SDCBP-203ENST00000424270 KIF3BO15066 747 aa10.5□□□□□ -0.73
SDCBP-203ENST00000424270 ROBO1Q9Y6N7 1651 aa10.5□□□□□ -0.73
SDCBP-203ENST00000424270 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
SDCBP-203ENST00000424270 PZPP20742 1482 aa10.49□□□□□ -0.73
SDCBP-203ENST00000424270 UBTFP17480 764 aaKnown RBP10.49□□□□□ -0.73
SDCBP-203ENST00000424270 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-203ENST00000424270 CFDP1Q9UEE9 299 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-203ENST00000424270 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
SDCBP-203ENST00000424270 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
SDCBP-203ENST00000424270 EID1Q9Y6B2 187 aa10.47□□□□□ -0.73
SDCBP-203ENST00000424270 TMEM94Q12767 1356 aa10.47□□□□□ -0.73
SDCBP-203ENST00000424270 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
SDCBP-203ENST00000424270 INO80Q9ULG1 1556 aaPredicted RBP10.47□□□□□ -0.73
SDCBP-203ENST00000424270 SPATA31A6Q5VVP1 1343 aa10.46□□□□□ -0.73
SDCBP-203ENST00000424270 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.74
SDCBP-203ENST00000424270 PLEKHH2Q8IVE3 1493 aa10.46□□□□□ -0.74
SDCBP-203ENST00000424270 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
SDCBP-203ENST00000424270 PHLPP1O60346 1717 aa10.46□□□□□ -0.74
SDCBP-203ENST00000424270 BCANQ96GW7 911 aa10.45□□□□□ -0.74
SDCBP-203ENST00000424270 CDC42BPAQ5VT25 1732 aa10.44□□□□□ -0.74
SDCBP-203ENST00000424270 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
SDCBP-203ENST00000424270 MSH6P52701 1360 aa10.44□□□□□ -0.74
SDCBP-203ENST00000424270 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
SDCBP-203ENST00000424270 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
SDCBP-203ENST00000424270 STAG3Q9UJ98 1225 aa10.43□□□□□ -0.74
SDCBP-203ENST00000424270 CCDC18Q5T9S5 1454 aa10.42□□□□□ -0.74
SDCBP-203ENST00000424270 DHX29Q7Z478 1369 aaKnown RBP10.42□□□□□ -0.74
SDCBP-203ENST00000424270 CCNB3Q8WWL7 1395 aa10.42□□□□□ -0.74
SDCBP-203ENST00000424270 LRP6O75581 1613 aa10.42□□□□□ -0.74
SDCBP-203ENST00000424270 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
SDCBP-203ENST00000424270 CDK12Q9NYV4 1490 aaPredicted RBP10.41□□□□□ -0.74
SDCBP-203ENST00000424270 EEA1Q15075 1411 aa10.41□□□□□ -0.74
SDCBP-203ENST00000424270 ZC3H13Q5T200 1668 aaKnown RBP10.41□□□□□ -0.74
SDCBP-203ENST00000424270 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.74
SDCBP-203ENST00000424270 AFF2P51816 1311 aa10.4□□□□□ -0.74
SDCBP-203ENST00000424270 GPATCH8Q9UKJ3 1502 aaKnown RBP10.4□□□□□ -0.74
SDCBP-203ENST00000424270 XIRP1Q702N8 1843 aaKnown RBP10.4□□□□□ -0.75
SDCBP-203ENST00000424270 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
SDCBP-203ENST00000424270 LTKP29376 864 aa10.39□□□□□ -0.75
SDCBP-203ENST00000424270 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 KCNA6P17658 529 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 RBM6P78332 1123 aaKnown RBP10.38□□□□□ -0.75
SDCBP-203ENST00000424270 C8orf37Q96NL8 207 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 SLC26A8Q96RN1 970 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
SDCBP-203ENST00000424270 RGS12O14924 1447 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 SETBP1Q9Y6X0 1596 aa10.38□□□□□ -0.75
SDCBP-203ENST00000424270 FGD6Q6ZV73 1430 aa10.37□□□□□ -0.75
SDCBP-203ENST00000424270 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
SDCBP-203ENST00000424270 ZNF644Q9H582 1327 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-203ENST00000424270 MAP3K1Q13233 1512 aa10.35□□□□□ -0.75
SDCBP-203ENST00000424270 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-203ENST00000424270 COL16A1Q07092 1604 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-203ENST00000424270 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
SDCBP-203ENST00000424270 ERVK-7P63135 1459 aa10.34□□□□□ -0.75
SDCBP-203ENST00000424270 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
SDCBP-203ENST00000424270 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-203ENST00000424270 UBR1Q8IWV7 1749 aa10.33□□□□□ -0.76
SDCBP-203ENST00000424270 ATF3P18847 181 aa10.33□□□□□ -0.76
SDCBP-203ENST00000424270 TIAM1Q13009 1591 aa10.32□□□□□ -0.76
SDCBP-203ENST00000424270 NCOA2Q15596 1464 aa10.32□□□□□ -0.76
SDCBP-203ENST00000424270 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
SDCBP-203ENST00000424270 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
SDCBP-203ENST00000424270 SLIT1O75093 1534 aa10.31□□□□□ -0.76
SDCBP-203ENST00000424270 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
SDCBP-203ENST00000424270 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
SDCBP-203ENST00000424270 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
SDCBP-203ENST00000424270 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
SDCBP-203ENST00000424270 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
SDCBP-203ENST00000424270 ABCC3O15438 1527 aa10.29□□□□□ -0.76
SDCBP-203ENST00000424270 ADAMTS2O95450 1211 aa10.29□□□□□ -0.76
SDCBP-203ENST00000424270 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
SDCBP-203ENST00000424270 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms