RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
SNX20-203ENST00000423026 ATP7AQ04656 1500 aa12.65□□□□□ -0.38
SNX20-203ENST00000423026 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
SNX20-203ENST00000423026 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
SNX20-203ENST00000423026 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
SNX20-203ENST00000423026 ANP32CO43423 234 aa12.63□□□□□ -0.39
SNX20-203ENST00000423026 ZNF518AQ6AHZ1 1483 aa12.62□□□□□ -0.39
SNX20-203ENST00000423026 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
SNX20-203ENST00000423026 KANK1Q14678 1352 aa12.62□□□□□ -0.39
SNX20-203ENST00000423026 CYB5RLQ6IPT4 315 aa12.62□□□□□ -0.39
SNX20-203ENST00000423026 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
SNX20-203ENST00000423026 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
SNX20-203ENST00000423026 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
SNX20-203ENST00000423026 ATP10AO60312 1499 aa12.59□□□□□ -0.39
SNX20-203ENST00000423026 WASHC2AQ641Q2 1341 aa12.59□□□□□ -0.39
SNX20-203ENST00000423026 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
SNX20-203ENST00000423026 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
SNX20-203ENST00000423026 KIF3BO15066 747 aa12.59□□□□□ -0.39
SNX20-203ENST00000423026 PLA2R1Q13018 1463 aa12.58□□□□□ -0.4
SNX20-203ENST00000423026 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
SNX20-203ENST00000423026 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
SNX20-203ENST00000423026 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
SNX20-203ENST00000423026 NEO1Q92859 1461 aa12.58□□□□□ -0.4
SNX20-203ENST00000423026 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
SNX20-203ENST00000423026 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 TET3O43151 1660 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 USP47Q96K76 1375 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
SNX20-203ENST00000423026 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
SNX20-203ENST00000423026 E9PCH4 1651 aa12.55□□□□□ -0.4
SNX20-203ENST00000423026 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
SNX20-203ENST00000423026 KDM5CP41229 1560 aa12.55□□□□□ -0.4
SNX20-203ENST00000423026 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
SNX20-203ENST00000423026 A2MP01023 1474 aa12.54□□□□□ -0.4
SNX20-203ENST00000423026 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
SNX20-203ENST00000423026 VWDEQ8N2E2 1590 aa12.53□□□□□ -0.4
SNX20-203ENST00000423026 HECW2Q9P2P5 1572 aa12.53□□□□□ -0.4
SNX20-203ENST00000423026 PRDM15P57071 1507 aaPredicted RBP12.53□□□□□ -0.4
SNX20-203ENST00000423026 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
SNX20-203ENST00000423026 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
SNX20-203ENST00000423026 GLI2P10070 1586 aa12.52□□□□□ -0.4
SNX20-203ENST00000423026 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.4
SNX20-203ENST00000423026 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.41
SNX20-203ENST00000423026 MAP3K4Q9Y6R4 1608 aa12.52□□□□□ -0.41
SNX20-203ENST00000423026 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
SNX20-203ENST00000423026 TRPM2O94759 1503 aa12.52□□□□□ -0.41
SNX20-203ENST00000423026 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
SNX20-203ENST00000423026 ARID4BQ4LE39 1312 aaPredicted RBP12.51□□□□□ -0.41
SNX20-203ENST00000423026 PTPRTO14522 1441 aa12.51□□□□□ -0.41
SNX20-203ENST00000423026 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
SNX20-203ENST00000423026 TRPM1Q7Z4N2 1603 aa12.5□□□□□ -0.41
SNX20-203ENST00000423026 MROH1Q8NDA8 1641 aa12.49□□□□□ -0.41
SNX20-203ENST00000423026 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
SNX20-203ENST00000423026 CEP152O94986 1710 aa12.49□□□□□ -0.41
SNX20-203ENST00000423026 FAM69CQ0P6D2 419 aa12.49□□□□□ -0.41
SNX20-203ENST00000423026 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
SNX20-203ENST00000423026 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
SNX20-203ENST00000423026 BCORL1Q5H9F3 1711 aa12.47□□□□□ -0.41
SNX20-203ENST00000423026 ABCA6Q8N139 1617 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 EFCAB6Q5THR3 1501 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 GGT6Q6P531 493 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 RICTORQ6R327 1708 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 CLTCL1P53675 1640 aa12.46□□□□□ -0.41
SNX20-203ENST00000423026 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.42
SNX20-203ENST00000423026 GPRASP1Q5JY77 1395 aa12.45□□□□□ -0.42
SNX20-203ENST00000423026 LAMC1P11047 1609 aa12.45□□□□□ -0.42
SNX20-203ENST00000423026 FRMPD1Q5SYB0 1578 aa12.45□□□□□ -0.42
SNX20-203ENST00000423026 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
SNX20-203ENST00000423026 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
SNX20-203ENST00000423026 KIF1BO60333 1816 aa12.44□□□□□ -0.42
SNX20-203ENST00000423026 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
SNX20-203ENST00000423026 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
SNX20-203ENST00000423026 WASHC2CQ9Y4E1 1318 aa12.43□□□□□ -0.42
SNX20-203ENST00000423026 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
SNX20-203ENST00000423026 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
SNX20-203ENST00000423026 TSPOAP1O95153 1857 aa12.42□□□□□ -0.42
SNX20-203ENST00000423026 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
SNX20-203ENST00000423026 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
SNX20-203ENST00000423026 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
SNX20-203ENST00000423026 AEBP2Q6ZN18 517 aaPredicted RBP12.4□□□□□ -0.42
SNX20-203ENST00000423026 ABCC3O15438 1527 aa12.39□□□□□ -0.43
SNX20-203ENST00000423026 NPATQ14207 1427 aa12.38□□□□□ -0.43
SNX20-203ENST00000423026 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
SNX20-203ENST00000423026 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
SNX20-203ENST00000423026 UGGT1Q9NYU2 1555 aa12.37□□□□□ -0.43
SNX20-203ENST00000423026 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
SNX20-203ENST00000423026 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
SNX20-203ENST00000423026 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
SNX20-203ENST00000423026 TMF1P82094 1093 aa12.36□□□□□ -0.43
SNX20-203ENST00000423026 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
SNX20-203ENST00000423026 MYOM2P54296 1465 aa12.36□□□□□ -0.43
SNX20-203ENST00000423026 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
SNX20-203ENST00000423026 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
SNX20-203ENST00000423026 TESK2Q96S53 571 aa12.34□□□□□ -0.43
SNX20-203ENST00000423026 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
SNX20-203ENST00000423026 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.44
SNX20-203ENST00000423026 SCAF11Q99590 1463 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms