RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 KIF3BO15066 747 aa21.92■■□□□ 1.1
TRAPPC10-203ENST00000422875 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
TRAPPC10-203ENST00000422875 SLC4A10Q6U841 1118 aa21.91■■□□□ 1.1
TRAPPC10-203ENST00000422875 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
TRAPPC10-203ENST00000422875 DDX49Q9Y6V7 483 aaKnown RBP21.9■■□□□ 1.1
TRAPPC10-203ENST00000422875 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.1
TRAPPC10-203ENST00000422875 KIF7Q2M1P5 1343 aa21.89■■□□□ 1.09
TRAPPC10-203ENST00000422875 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.09
TRAPPC10-203ENST00000422875 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
TRAPPC10-203ENST00000422875 DDX11L8A8MPP1 907 aa21.87■■□□□ 1.09
TRAPPC10-203ENST00000422875 FOXD4L6Q3SYB3 417 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 FOXD4L3Q6VB84 417 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 E9PSI1 815 aa21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 ANKRD45Q5TZF3 282 aa21.86■■□□□ 1.09
TRAPPC10-203ENST00000422875 CCDC7Q96M83 1385 aa21.85■■□□□ 1.09
TRAPPC10-203ENST00000422875 EIF3AQ14152 1382 aaKnown RBP21.85■■□□□ 1.09
TRAPPC10-203ENST00000422875 NFKBIBQ15653 356 aa21.85■■□□□ 1.09
TRAPPC10-203ENST00000422875 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
TRAPPC10-203ENST00000422875 STK31Q9BXU1 1019 aa21.84■■□□□ 1.09
TRAPPC10-203ENST00000422875 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC10-203ENST00000422875 ST18O60284 1047 aa21.82■■□□□ 1.08
TRAPPC10-203ENST00000422875 HMMRO75330 724 aa21.82■■□□□ 1.08
TRAPPC10-203ENST00000422875 ZKSCAN2Q63HK3 967 aa21.82■■□□□ 1.08
TRAPPC10-203ENST00000422875 TERF2IPQ9NYB0 399 aa21.81■■□□□ 1.08
TRAPPC10-203ENST00000422875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRAPPC10-203ENST00000422875 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
TRAPPC10-203ENST00000422875 SMARCA2P51531 1590 aa21.8■■□□□ 1.08
TRAPPC10-203ENST00000422875 GNL2Q13823 731 aaKnown RBP21.79■■□□□ 1.08
TRAPPC10-203ENST00000422875 CDCA7LQ96GN5 454 aa21.78■■□□□ 1.08
TRAPPC10-203ENST00000422875 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
TRAPPC10-203ENST00000422875 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
TRAPPC10-203ENST00000422875 IL27Q8NEV9 243 aa21.74■■□□□ 1.07
TRAPPC10-203ENST00000422875 BRPF3Q9ULD4 1205 aa21.73■■□□□ 1.07
TRAPPC10-203ENST00000422875 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
TRAPPC10-203ENST00000422875 CHMP5Q9NZZ3 219 aa21.73■■□□□ 1.07
TRAPPC10-203ENST00000422875 NUTM2FA1L443 756 aa21.73■■□□□ 1.07
TRAPPC10-203ENST00000422875 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC10-203ENST00000422875 RILPL2Q969X0 211 aa21.72■■□□□ 1.07
TRAPPC10-203ENST00000422875 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
TRAPPC10-203ENST00000422875 RSPH4AQ5TD94 716 aa21.71■■□□□ 1.07
TRAPPC10-203ENST00000422875 HTATSF1O43719 755 aaKnown RBP21.71■■□□□ 1.07
TRAPPC10-203ENST00000422875 PANK1Q8TE04 598 aa21.71■■□□□ 1.07
TRAPPC10-203ENST00000422875 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC10-203ENST00000422875 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC10-203ENST00000422875 NPHP1O15259 732 aa21.69■■□□□ 1.06
TRAPPC10-203ENST00000422875 DZIP1LQ8IYY4 767 aaKnown RBP21.69■■□□□ 1.06
TRAPPC10-203ENST00000422875 HSP90B1P14625 803 aaKnown RBP21.68■■□□□ 1.06
TRAPPC10-203ENST00000422875 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
TRAPPC10-203ENST00000422875 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
TRAPPC10-203ENST00000422875 PHF14O94880 888 aa21.68■■□□□ 1.06
TRAPPC10-203ENST00000422875 UACAQ9BZF9 1416 aa21.68■■□□□ 1.06
TRAPPC10-203ENST00000422875 FRAT2O75474 233 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 LNPKQ9C0E8 428 aa21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 KIF21BO75037 1637 aa21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 ADAMTS8Q9UP79 889 aa21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
TRAPPC10-203ENST00000422875 FAM13BQ9NYF5 915 aa21.66■■□□□ 1.06
TRAPPC10-203ENST00000422875 KIF16BQ96L93 1317 aa21.66■■□□□ 1.06
TRAPPC10-203ENST00000422875 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
TRAPPC10-203ENST00000422875 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 LTV1Q96GA3 475 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 CHMP3Q9Y3E7 222 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 IGF1RP08069 1367 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
TRAPPC10-203ENST00000422875 C22orf23Q9BZE7 217 aa21.64■■□□□ 1.05
TRAPPC10-203ENST00000422875 CSPP1Q1MSJ5 1256 aa21.64■■□□□ 1.05
TRAPPC10-203ENST00000422875 GPATCH3Q96I76 525 aa21.63■■□□□ 1.05
TRAPPC10-203ENST00000422875 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
TRAPPC10-203ENST00000422875 TNNT3P45378 269 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC10-203ENST00000422875 GORABQ5T7V8 394 aa21.6■■□□□ 1.05
TRAPPC10-203ENST00000422875 AMPHP49418 695 aa21.59■■□□□ 1.05
TRAPPC10-203ENST00000422875 RIPK4P57078 832 aa21.59■■□□□ 1.05
TRAPPC10-203ENST00000422875 TPM4P67936 248 aa21.57■■□□□ 1.04
TRAPPC10-203ENST00000422875 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
TRAPPC10-203ENST00000422875 BACH2Q9BYV9 841 aa21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 MINK1Q8N4C8 1332 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 NGDNQ8NEJ9 315 aaKnown RBP21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 MYOM3Q5VTT5 1437 aa21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 REC8O95072 547 aa21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 ISY1Q9ULR0 285 aaKnown RBP21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 SF3A1Q15459 793 aaKnown RBP21.56■■□□□ 1.04
TRAPPC10-203ENST00000422875 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 CSB-PGBD3P0DP91 1061 aa21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 MSH5O43196 834 aa21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 CCDC9Q9Y3X0 531 aaKnown RBP21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
TRAPPC10-203ENST00000422875 MCTP1Q6DN14 999 aa21.54■■□□□ 1.04
TRAPPC10-203ENST00000422875 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
TRAPPC10-203ENST00000422875 CREBRFQ8IUR6 639 aa21.53■■□□□ 1.04
TRAPPC10-203ENST00000422875 CHMP4AQ9BY43 222 aa21.53■■□□□ 1.04
TRAPPC10-203ENST00000422875 ANO2Q9NQ90 1003 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms