RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
CDCA3-202ENST00000422785 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
CDCA3-202ENST00000422785 SPAG9O60271 1321 aaKnown RBP19.13■□□□□ 0.65
CDCA3-202ENST00000422785 ATP10AO60312 1499 aa19.12■□□□□ 0.65
CDCA3-202ENST00000422785 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
CDCA3-202ENST00000422785 BCORL1Q5H9F3 1711 aa19.12■□□□□ 0.65
CDCA3-202ENST00000422785 ZFYVE16Q7Z3T8 1539 aa19.11■□□□□ 0.65
CDCA3-202ENST00000422785 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
CDCA3-202ENST00000422785 FANCAO15360 1455 aa19.11■□□□□ 0.65
CDCA3-202ENST00000422785 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
CDCA3-202ENST00000422785 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
CDCA3-202ENST00000422785 ASXL2Q76L83 1435 aa19.1■□□□□ 0.65
CDCA3-202ENST00000422785 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
CDCA3-202ENST00000422785 PRKRIP1Q9H875 184 aaPredicted RBP19.1■□□□□ 0.65
CDCA3-202ENST00000422785 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
CDCA3-202ENST00000422785 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
CDCA3-202ENST00000422785 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
CDCA3-202ENST00000422785 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
CDCA3-202ENST00000422785 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
CDCA3-202ENST00000422785 ADGRL1O94910 1474 aa19.04■□□□□ 0.64
CDCA3-202ENST00000422785 A2MP01023 1474 aa19.04■□□□□ 0.64
CDCA3-202ENST00000422785 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
CDCA3-202ENST00000422785 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
CDCA3-202ENST00000422785 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
CDCA3-202ENST00000422785 RGL3Q3MIN7 710 aa19.02■□□□□ 0.63
CDCA3-202ENST00000422785 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
CDCA3-202ENST00000422785 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDCA3-202ENST00000422785 ST20-MTHFSA0A0A6YYL1 179 aa19■□□□□ 0.63
CDCA3-202ENST00000422785 E9PCH4 1651 aa19■□□□□ 0.63
CDCA3-202ENST00000422785 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
CDCA3-202ENST00000422785 CCDC184Q52MB2 194 aa18.98■□□□□ 0.63
CDCA3-202ENST00000422785 LAMC1P11047 1609 aa18.98■□□□□ 0.63
CDCA3-202ENST00000422785 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
CDCA3-202ENST00000422785 HNRNPUQ00839 825 aaKnown RBP eCLIP18.97■□□□□ 0.63
CDCA3-202ENST00000422785 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
CDCA3-202ENST00000422785 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
CDCA3-202ENST00000422785 TRPM2O94759 1503 aa18.96■□□□□ 0.63
CDCA3-202ENST00000422785 TET3O43151 1660 aa18.96■□□□□ 0.63
CDCA3-202ENST00000422785 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
CDCA3-202ENST00000422785 PTPRTO14522 1441 aa18.95■□□□□ 0.62
CDCA3-202ENST00000422785 KANK1Q14678 1352 aa18.95■□□□□ 0.62
CDCA3-202ENST00000422785 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
CDCA3-202ENST00000422785 SPHKAPQ2M3C7 1700 aa18.93■□□□□ 0.62
CDCA3-202ENST00000422785 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
CDCA3-202ENST00000422785 ZNF518AQ6AHZ1 1483 aa18.92■□□□□ 0.62
CDCA3-202ENST00000422785 CFAP74Q9C0B2 1584 aa18.92■□□□□ 0.62
CDCA3-202ENST00000422785 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
CDCA3-202ENST00000422785 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
CDCA3-202ENST00000422785 KIF3BO15066 747 aa18.91■□□□□ 0.62
CDCA3-202ENST00000422785 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
CDCA3-202ENST00000422785 CEP152O94986 1710 aa18.91■□□□□ 0.62
CDCA3-202ENST00000422785 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
CDCA3-202ENST00000422785 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
CDCA3-202ENST00000422785 CLTCL1P53675 1640 aa18.88■□□□□ 0.61
CDCA3-202ENST00000422785 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
CDCA3-202ENST00000422785 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
CDCA3-202ENST00000422785 FKBP8Q14318 412 aa18.87■□□□□ 0.61
CDCA3-202ENST00000422785 NEFLP07196 543 aa18.87■□□□□ 0.61
CDCA3-202ENST00000422785 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
CDCA3-202ENST00000422785 POGZQ7Z3K3 1410 aa18.86■□□□□ 0.61
CDCA3-202ENST00000422785 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
CDCA3-202ENST00000422785 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
CDCA3-202ENST00000422785 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
CDCA3-202ENST00000422785 TESK2Q96S53 571 aa18.84■□□□□ 0.61
CDCA3-202ENST00000422785 MLH3Q9UHC1 1453 aa18.83■□□□□ 0.61
CDCA3-202ENST00000422785 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
CDCA3-202ENST00000422785 ZBED9Q6R2W3 1325 aa18.82■□□□□ 0.6
CDCA3-202ENST00000422785 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
CDCA3-202ENST00000422785 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
CDCA3-202ENST00000422785 RALBP1Q15311 655 aa18.8■□□□□ 0.6
CDCA3-202ENST00000422785 NEO1Q92859 1461 aa18.79■□□□□ 0.6
CDCA3-202ENST00000422785 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
CDCA3-202ENST00000422785 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
CDCA3-202ENST00000422785 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
CDCA3-202ENST00000422785 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
CDCA3-202ENST00000422785 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
CDCA3-202ENST00000422785 TMF1P82094 1093 aa18.77■□□□□ 0.6
CDCA3-202ENST00000422785 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
CDCA3-202ENST00000422785 KIAA1210Q9ULL0 1709 aa18.75■□□□□ 0.59
CDCA3-202ENST00000422785 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
CDCA3-202ENST00000422785 KIF1BO60333 1816 aa18.75■□□□□ 0.59
CDCA3-202ENST00000422785 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
CDCA3-202ENST00000422785 TMC1Q8TDI8 760 aa18.75■□□□□ 0.59
CDCA3-202ENST00000422785 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
CDCA3-202ENST00000422785 BCANQ96GW7 911 aa18.75■□□□□ 0.59
CDCA3-202ENST00000422785 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
CDCA3-202ENST00000422785 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
CDCA3-202ENST00000422785 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
CDCA3-202ENST00000422785 MYOM2P54296 1465 aa18.73■□□□□ 0.59
CDCA3-202ENST00000422785 ABCA6Q8N139 1617 aa18.73■□□□□ 0.59
CDCA3-202ENST00000422785 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
CDCA3-202ENST00000422785 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.59
CDCA3-202ENST00000422785 IFT172Q9UG01 1749 aa18.7■□□□□ 0.58
CDCA3-202ENST00000422785 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
CDCA3-202ENST00000422785 NPATQ14207 1427 aa18.68■□□□□ 0.58
CDCA3-202ENST00000422785 RAPGEF3O95398 923 aa18.68■□□□□ 0.58
CDCA3-202ENST00000422785 PANK3Q9H999 370 aa18.68■□□□□ 0.58
CDCA3-202ENST00000422785 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
CDCA3-202ENST00000422785 MROH2AA6NES4 1674 aa18.67■□□□□ 0.58
CDCA3-202ENST00000422785 GGT6Q6P531 493 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms