RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
LSM8-203ENST00000422760 DDX10Q13206 875 aaKnown RBP32.4■■■□□ 2.78
LSM8-203ENST00000422760 EIF2AK4Q9P2K8 1649 aaKnown RBP32.4■■■□□ 2.78
LSM8-203ENST00000422760 HSPA5P11021 654 aaKnown RBP32.39■■■□□ 2.78
LSM8-203ENST00000422760 PLA2R1Q13018 1463 aa32.39■■■□□ 2.78
LSM8-203ENST00000422760 KDM5CP41229 1560 aa32.39■■■□□ 2.77
LSM8-203ENST00000422760 POGZQ7Z3K3 1410 aa32.38■■■□□ 2.77
LSM8-203ENST00000422760 CCDC144AA2RUR9 1427 aa32.37■■■□□ 2.77
LSM8-203ENST00000422760 EIF4G2P78344 907 aaKnown RBP eCLIP32.37■■■□□ 2.77
LSM8-203ENST00000422760 MAP3K4Q9Y6R4 1608 aa32.36■■■□□ 2.77
LSM8-203ENST00000422760 NEO1Q92859 1461 aa32.34■■■□□ 2.77
LSM8-203ENST00000422760 MYT1LQ9UL68 1186 aa32.34■■■□□ 2.77
LSM8-203ENST00000422760 ATP10AO60312 1499 aa32.33■■■□□ 2.77
LSM8-203ENST00000422760 CCER2I3L3R5 266 aa32.33■■■□□ 2.77
LSM8-203ENST00000422760 UHRF1BP1Q6BDS2 1440 aa32.33■■■□□ 2.77
LSM8-203ENST00000422760 E9PCH4 1651 aa32.32■■■□□ 2.76
LSM8-203ENST00000422760 DHX29Q7Z478 1369 aaKnown RBP32.31■■■□□ 2.76
LSM8-203ENST00000422760 HECW2Q9P2P5 1572 aa32.3■■■□□ 2.76
LSM8-203ENST00000422760 PRDM15P57071 1507 aaPredicted RBP32.3■■■□□ 2.76
LSM8-203ENST00000422760 VWDEQ8N2E2 1590 aa32.3■■■□□ 2.76
LSM8-203ENST00000422760 MROH1Q8NDA8 1641 aa32.29■■■□□ 2.76
LSM8-203ENST00000422760 TET3O43151 1660 aa32.29■■■□□ 2.76
LSM8-203ENST00000422760 GLI2P10070 1586 aa32.28■■■□□ 2.76
LSM8-203ENST00000422760 ZNF326Q5BKZ1 582 aaKnown RBP32.26■■■□□ 2.76
LSM8-203ENST00000422760 SPATA31E1Q6ZUB1 1445 aa32.26■■■□□ 2.76
LSM8-203ENST00000422760 MLH3Q9UHC1 1453 aa32.26■■■□□ 2.76
LSM8-203ENST00000422760 RALGAPBQ86X10 1494 aa32.26■■■□□ 2.75
LSM8-203ENST00000422760 KIF3BO15066 747 aa32.22■■■□□ 2.75
LSM8-203ENST00000422760 SPHKAPQ2M3C7 1700 aa32.22■■■□□ 2.75
LSM8-203ENST00000422760 A2MP01023 1474 aa32.22■■■□□ 2.75
LSM8-203ENST00000422760 KANK1Q14678 1352 aa32.21■■■□□ 2.75
LSM8-203ENST00000422760 WASHC2AQ641Q2 1341 aa32.21■■■□□ 2.75
LSM8-203ENST00000422760 POLR1AO95602 1720 aaPredicted RBP32.2■■■□□ 2.75
LSM8-203ENST00000422760 DIP2BQ9P265 1576 aa32.2■■■□□ 2.75
LSM8-203ENST00000422760 ABCA6Q8N139 1617 aa32.2■■■□□ 2.75
LSM8-203ENST00000422760 FRMPD1Q5SYB0 1578 aa32.19■■■□□ 2.74
LSM8-203ENST00000422760 TRPM2O94759 1503 aa32.19■■■□□ 2.74
LSM8-203ENST00000422760 ANP32CO43423 234 aa32.19■■■□□ 2.74
LSM8-203ENST00000422760 DCAF11Q8TEB1 546 aa32.19■■■□□ 2.74
LSM8-203ENST00000422760 RNF17Q9BXT8 1623 aaKnown RBP32.19■■■□□ 2.74
LSM8-203ENST00000422760 RICTORQ6R327 1708 aa32.18■■■□□ 2.74
LSM8-203ENST00000422760 KDM2AQ9Y2K7 1162 aa32.15■■■□□ 2.74
LSM8-203ENST00000422760 USP47Q96K76 1375 aa32.14■■■□□ 2.74
LSM8-203ENST00000422760 PTPRTO14522 1441 aa32.13■■■□□ 2.73
LSM8-203ENST00000422760 BCORL1Q5H9F3 1711 aa32.12■■■□□ 2.73
LSM8-203ENST00000422760 CEP152O94986 1710 aa32.11■■■□□ 2.73
LSM8-203ENST00000422760 PRAG1Q86YV5 1406 aa32.11■■■□□ 2.73
LSM8-203ENST00000422760 TRPM1Q7Z4N2 1603 aa32.11■■■□□ 2.73
LSM8-203ENST00000422760 EFCAB6Q5THR3 1501 aa32.1■■■□□ 2.73
LSM8-203ENST00000422760 RGL3Q3MIN7 710 aa32.1■■■□□ 2.73
LSM8-203ENST00000422760 CCDC7Q96M83 1385 aa32.1■■■□□ 2.73
LSM8-203ENST00000422760 CLTCL1P53675 1640 aa32.1■■■□□ 2.73
LSM8-203ENST00000422760 RAPGEF3O95398 923 aa32.09■■■□□ 2.73
LSM8-203ENST00000422760 SUPT16HQ9Y5B9 1047 aaKnown RBP32.08■■■□□ 2.73
LSM8-203ENST00000422760 PPRC1Q5VV67 1664 aaKnown RBP32.08■■■□□ 2.73
LSM8-203ENST00000422760 DIP2CQ9Y2E4 1556 aa32.08■■■□□ 2.73
LSM8-203ENST00000422760 C11orf95C9JLR9 678 aaPredicted RBP32.08■■■□□ 2.73
LSM8-203ENST00000422760 LMTK2Q8IWU2 1503 aa32.07■■■□□ 2.72
LSM8-203ENST00000422760 FAM69CQ0P6D2 419 aa32.04■■■□□ 2.72
LSM8-203ENST00000422760 CARD11Q9BXL7 1154 aa32.02■■■□□ 2.72
LSM8-203ENST00000422760 TSPOAP1O95153 1857 aa32.02■■■□□ 2.72
LSM8-203ENST00000422760 CNTLNQ9NXG0 1405 aa32.02■■■□□ 2.72
LSM8-203ENST00000422760 ROCK2O75116 1388 aaKnown RBP32■■■□□ 2.71
LSM8-203ENST00000422760 KIF7Q2M1P5 1343 aa32■■■□□ 2.71
LSM8-203ENST00000422760 LAMC1P11047 1609 aa31.96■■■□□ 2.71
LSM8-203ENST00000422760 ZMYM4Q5VZL5 1548 aa31.95■■■□□ 2.71
LSM8-203ENST00000422760 YEATS2Q9ULM3 1422 aa31.94■■■□□ 2.7
LSM8-203ENST00000422760 NEURL4Q96JN8 1562 aa31.93■■■□□ 2.7
LSM8-203ENST00000422760 UGGT1Q9NYU2 1555 aa31.93■■■□□ 2.7
LSM8-203ENST00000422760 GPRASP1Q5JY77 1395 aa31.92■■■□□ 2.7
LSM8-203ENST00000422760 MADDQ8WXG6 1647 aa31.92■■■□□ 2.7
LSM8-203ENST00000422760 ABCC3O15438 1527 aa31.91■■■□□ 2.7
LSM8-203ENST00000422760 KIF13AQ9H1H9 1805 aa31.9■■■□□ 2.7
LSM8-203ENST00000422760 GGT6Q6P531 493 aa31.9■■■□□ 2.7
LSM8-203ENST00000422760 KIF1BO60333 1816 aa31.89■■■□□ 2.7
LSM8-203ENST00000422760 CAMSAP1Q5T5Y3 1602 aa31.88■■■□□ 2.69
LSM8-203ENST00000422760 NPATQ14207 1427 aa31.87■■■□□ 2.69
LSM8-203ENST00000422760 NBPF1Q3BBV0 1214 aa31.85■■■□□ 2.69
LSM8-203ENST00000422760 ST20-MTHFSA0A0A6YYL1 179 aa31.84■■■□□ 2.69
LSM8-203ENST00000422760 ARID4BQ4LE39 1312 aaPredicted RBP31.84■■■□□ 2.69
LSM8-203ENST00000422760 MROH2AA6NES4 1674 aa31.83■■■□□ 2.69
LSM8-203ENST00000422760 ZC3H13Q5T200 1668 aaKnown RBP31.83■■■□□ 2.69
LSM8-203ENST00000422760 MYT1Q01538 1121 aa31.83■■■□□ 2.69
LSM8-203ENST00000422760 CFAP65Q6ZU64 1925 aaKnown RBP31.81■■■□□ 2.68
LSM8-203ENST00000422760 WASHC2CQ9Y4E1 1318 aa31.8■■■□□ 2.68
LSM8-203ENST00000422760 IFT172Q9UG01 1749 aa31.78■■■□□ 2.68
LSM8-203ENST00000422760 STAC3Q96MF2 364 aa31.77■■■□□ 2.68
LSM8-203ENST00000422760 SIGLEC1Q9BZZ2 1709 aa31.77■■■□□ 2.68
LSM8-203ENST00000422760 ADGRB3O60242 1522 aa31.76■■■□□ 2.68
LSM8-203ENST00000422760 MYOM2P54296 1465 aa31.74■■■□□ 2.67
LSM8-203ENST00000422760 POLR3GLQ9BT43 218 aa31.73■■■□□ 2.67
LSM8-203ENST00000422760 NEFLP07196 543 aa31.73■■■□□ 2.67
LSM8-203ENST00000422760 IQGAP1P46940 1657 aa31.72■■■□□ 2.67
LSM8-203ENST00000422760 KIAA1210Q9ULL0 1709 aa31.72■■■□□ 2.67
LSM8-203ENST00000422760 REREQ9P2R6 1566 aa31.71■■■□□ 2.67
LSM8-203ENST00000422760 NOS1P29475 1434 aa31.69■■■□□ 2.66
LSM8-203ENST00000422760 ARHGAP31Q2M1Z3 1444 aa31.68■■■□□ 2.66
LSM8-203ENST00000422760 PIK3C2BO00750 1634 aa31.67■■■□□ 2.66
LSM8-203ENST00000422760 SYNMO15061 1565 aa31.67■■■□□ 2.66
LSM8-203ENST00000422760 PRKRIP1Q9H875 184 aaPredicted RBP31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms