RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 NPATQ14207 1427 aa12.91□□□□□ -0.34
TRIM43CP-201ENST00000422468 ZBTB22O15209 634 aa12.91□□□□□ -0.34
TRIM43CP-201ENST00000422468 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
TRIM43CP-201ENST00000422468 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
TRIM43CP-201ENST00000422468 GGT6Q6P531 493 aa12.9□□□□□ -0.34
TRIM43CP-201ENST00000422468 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
TRIM43CP-201ENST00000422468 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
TRIM43CP-201ENST00000422468 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
TRIM43CP-201ENST00000422468 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
TRIM43CP-201ENST00000422468 TSPY4P0CV99 314 aa12.88□□□□□ -0.35
TRIM43CP-201ENST00000422468 TSPY10P0CW01 314 aa12.88□□□□□ -0.35
TRIM43CP-201ENST00000422468 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
TRIM43CP-201ENST00000422468 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
TRIM43CP-201ENST00000422468 APLP2Q06481 763 aa12.86□□□□□ -0.35
TRIM43CP-201ENST00000422468 MYO3AQ8NEV4 1616 aa12.86□□□□□ -0.35
TRIM43CP-201ENST00000422468 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
TRIM43CP-201ENST00000422468 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
TRIM43CP-201ENST00000422468 KIF3BO15066 747 aa12.85□□□□□ -0.35
TRIM43CP-201ENST00000422468 KDM5DQ9BY66 1539 aa12.84□□□□□ -0.35
TRIM43CP-201ENST00000422468 PTPRTO14522 1441 aa12.83□□□□□ -0.36
TRIM43CP-201ENST00000422468 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
TRIM43CP-201ENST00000422468 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
TRIM43CP-201ENST00000422468 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
TRIM43CP-201ENST00000422468 CEP170BQ9Y4F5 1589 aaPredicted RBP12.82□□□□□ -0.36
TRIM43CP-201ENST00000422468 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
TRIM43CP-201ENST00000422468 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
TRIM43CP-201ENST00000422468 EIF2AK4Q9P2K8 1649 aaKnown RBP12.82□□□□□ -0.36
TRIM43CP-201ENST00000422468 CERKQ8TCT0 537 aa12.82□□□□□ -0.36
TRIM43CP-201ENST00000422468 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
TRIM43CP-201ENST00000422468 PZPP20742 1482 aa12.8□□□□□ -0.36
TRIM43CP-201ENST00000422468 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
TRIM43CP-201ENST00000422468 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
TRIM43CP-201ENST00000422468 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 PLA2R1Q13018 1463 aa12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
TRIM43CP-201ENST00000422468 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.36
TRIM43CP-201ENST00000422468 FBXO31Q5XUX0 539 aaPredicted RBP12.77□□□□□ -0.37
TRIM43CP-201ENST00000422468 TNRQ92752 1358 aa12.77□□□□□ -0.37
TRIM43CP-201ENST00000422468 ABCC5O15440 1437 aa12.77□□□□□ -0.37
TRIM43CP-201ENST00000422468 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.37
TRIM43CP-201ENST00000422468 ABCC3O15438 1527 aa12.76□□□□□ -0.37
TRIM43CP-201ENST00000422468 CEP152O94986 1710 aa12.75□□□□□ -0.37
TRIM43CP-201ENST00000422468 DAPK1P53355 1430 aa12.75□□□□□ -0.37
TRIM43CP-201ENST00000422468 PKD2Q13563 968 aa12.75□□□□□ -0.37
TRIM43CP-201ENST00000422468 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
TRIM43CP-201ENST00000422468 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
TRIM43CP-201ENST00000422468 LTBP4Q8N2S1 1624 aa12.74□□□□□ -0.37
TRIM43CP-201ENST00000422468 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
TRIM43CP-201ENST00000422468 NLRP1Q9C000 1473 aa12.73□□□□□ -0.37
TRIM43CP-201ENST00000422468 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
TRIM43CP-201ENST00000422468 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
TRIM43CP-201ENST00000422468 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
TRIM43CP-201ENST00000422468 RRP7BPQ9NSQ0 103 aa12.72□□□□□ -0.37
TRIM43CP-201ENST00000422468 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
TRIM43CP-201ENST00000422468 PRDM15P57071 1507 aaPredicted RBP12.72□□□□□ -0.37
TRIM43CP-201ENST00000422468 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.37
TRIM43CP-201ENST00000422468 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
TRIM43CP-201ENST00000422468 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
TRIM43CP-201ENST00000422468 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
TRIM43CP-201ENST00000422468 THEMISQ8N1K5 641 aaPredicted RBP12.69□□□□□ -0.38
TRIM43CP-201ENST00000422468 ERVK-7P63135 1459 aa12.69□□□□□ -0.38
TRIM43CP-201ENST00000422468 NEURL4Q96JN8 1562 aa12.69□□□□□ -0.38
TRIM43CP-201ENST00000422468 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
TRIM43CP-201ENST00000422468 ADGRL2O95490 1459 aa12.67□□□□□ -0.38
TRIM43CP-201ENST00000422468 CHIC2Q9UKJ5 165 aa12.67□□□□□ -0.38
TRIM43CP-201ENST00000422468 ARHGAP31Q2M1Z3 1444 aa12.67□□□□□ -0.38
TRIM43CP-201ENST00000422468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM43CP-201ENST00000422468 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
TRIM43CP-201ENST00000422468 KANK1Q14678 1352 aa12.66□□□□□ -0.38
TRIM43CP-201ENST00000422468 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
TRIM43CP-201ENST00000422468 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
TRIM43CP-201ENST00000422468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM43CP-201ENST00000422468 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
TRIM43CP-201ENST00000422468 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
TRIM43CP-201ENST00000422468 MED14O60244 1454 aa12.64□□□□□ -0.39
TRIM43CP-201ENST00000422468 IQGAP1P46940 1657 aa12.63□□□□□ -0.39
TRIM43CP-201ENST00000422468 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
TRIM43CP-201ENST00000422468 CPS1P31327 1500 aa12.61□□□□□ -0.39
TRIM43CP-201ENST00000422468 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
TRIM43CP-201ENST00000422468 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
TRIM43CP-201ENST00000422468 EFCAB6Q5THR3 1501 aa12.6□□□□□ -0.39
TRIM43CP-201ENST00000422468 ANKRD50Q9ULJ7 1429 aa12.6□□□□□ -0.39
TRIM43CP-201ENST00000422468 KDM5AP29375 1690 aaKnown RBP12.6□□□□□ -0.39
TRIM43CP-201ENST00000422468 SLIT1O75093 1534 aa12.58□□□□□ -0.4
TRIM43CP-201ENST00000422468 SYNMO15061 1565 aa12.58□□□□□ -0.4
TRIM43CP-201ENST00000422468 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
TRIM43CP-201ENST00000422468 ARHGAP23Q9P227 1491 aa12.58□□□□□ -0.4
TRIM43CP-201ENST00000422468 UNC13BO14795 1591 aa12.57□□□□□ -0.4
TRIM43CP-201ENST00000422468 SCAF11Q99590 1463 aaKnown RBP12.57□□□□□ -0.4
TRIM43CP-201ENST00000422468 TET3O43151 1660 aa12.57□□□□□ -0.4
TRIM43CP-201ENST00000422468 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
TRIM43CP-201ENST00000422468 ROCK1Q13464 1354 aa12.56□□□□□ -0.4
TRIM43CP-201ENST00000422468 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
TRIM43CP-201ENST00000422468 STRCP1A6NGW2 1772 aa12.56□□□□□ -0.4
TRIM43CP-201ENST00000422468 NOS1P29475 1434 aa12.55□□□□□ -0.4
TRIM43CP-201ENST00000422468 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms