RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 MAGI2Q86UL8 1455 aa13.25□□□□□ -0.29
HPS4-204ENST00000422379 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
HPS4-204ENST00000422379 FOXD1Q16676 465 aa13.24□□□□□ -0.29
HPS4-204ENST00000422379 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
HPS4-204ENST00000422379 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
HPS4-204ENST00000422379 NUP155O75694 1391 aa13.23□□□□□ -0.29
HPS4-204ENST00000422379 DEPDC5O75140 1603 aa13.23□□□□□ -0.29
HPS4-204ENST00000422379 ARHGEF40Q8TER5 1519 aa13.22□□□□□ -0.29
HPS4-204ENST00000422379 KIF3BO15066 747 aa13.22□□□□□ -0.29
HPS4-204ENST00000422379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.296e-6■□□□□ 8.2
HPS4-204ENST00000422379 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
HPS4-204ENST00000422379 ATP10AO60312 1499 aa13.21□□□□□ -0.3
HPS4-204ENST00000422379 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.3
HPS4-204ENST00000422379 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
HPS4-204ENST00000422379 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
HPS4-204ENST00000422379 PRDM15P57071 1507 aaPredicted RBP13.19□□□□□ -0.3
HPS4-204ENST00000422379 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
HPS4-204ENST00000422379 RNF17Q9BXT8 1623 aaKnown RBP13.19□□□□□ -0.3
HPS4-204ENST00000422379 BCORL1Q5H9F3 1711 aa13.18□□□□□ -0.3
HPS4-204ENST00000422379 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
HPS4-204ENST00000422379 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
HPS4-204ENST00000422379 PKD2Q13563 968 aa13.17□□□□□ -0.3
HPS4-204ENST00000422379 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
HPS4-204ENST00000422379 GGT6Q6P531 493 aa13.15□□□□□ -0.3
HPS4-204ENST00000422379 AGLP35573 1532 aa13.15□□□□□ -0.3
HPS4-204ENST00000422379 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
HPS4-204ENST00000422379 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
HPS4-204ENST00000422379 ABCC3O15438 1527 aa13.12□□□□□ -0.31
HPS4-204ENST00000422379 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
HPS4-204ENST00000422379 CEP152O94986 1710 aa13.12□□□□□ -0.31
HPS4-204ENST00000422379 E9PCH4 1651 aa13.11□□□□□ -0.31
HPS4-204ENST00000422379 LMTK2Q8IWU2 1503 aa13.11□□□□□ -0.31
HPS4-204ENST00000422379 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
HPS4-204ENST00000422379 TET3O43151 1660 aa13.1□□□□□ -0.31
HPS4-204ENST00000422379 EFCAB6Q5THR3 1501 aa13.1□□□□□ -0.31
HPS4-204ENST00000422379 KANK1Q14678 1352 aa13.09□□□□□ -0.31
HPS4-204ENST00000422379 MLECQ14165 292 aa13.09□□□□□ -0.31
HPS4-204ENST00000422379 NPATQ14207 1427 aa13.08□□□□□ -0.32
HPS4-204ENST00000422379 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
HPS4-204ENST00000422379 PTPRTO14522 1441 aa13.06□□□□□ -0.32
HPS4-204ENST00000422379 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
HPS4-204ENST00000422379 RPRD2Q5VT52 1461 aaKnown RBP13.05□□□□□ -0.32
HPS4-204ENST00000422379 ARID4BQ4LE39 1312 aaPredicted RBP13.04□□□□□ -0.32
HPS4-204ENST00000422379 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
HPS4-204ENST00000422379 ADRA2BP18089 450 aa13.03□□□□□ -0.32
HPS4-204ENST00000422379 CLTCQ00610 1675 aaKnown RBP13.03□□□□□ -0.32
HPS4-204ENST00000422379 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
HPS4-204ENST00000422379 TRPM2O94759 1503 aa13.02□□□□□ -0.32
HPS4-204ENST00000422379 ARHGAP31Q2M1Z3 1444 aa13.01□□□□□ -0.33
HPS4-204ENST00000422379 CLTCL1P53675 1640 aa13.01□□□□□ -0.33
HPS4-204ENST00000422379 SPHKAPQ2M3C7 1700 aa13.01□□□□□ -0.33
HPS4-204ENST00000422379 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
HPS4-204ENST00000422379 SYNMO15061 1565 aa13□□□□□ -0.33
HPS4-204ENST00000422379 NOS1P29475 1434 aa13□□□□□ -0.33
HPS4-204ENST00000422379 CCDC144AA2RUR9 1427 aa12.99□□□□□ -0.33
HPS4-204ENST00000422379 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
HPS4-204ENST00000422379 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
HPS4-204ENST00000422379 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
HPS4-204ENST00000422379 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
HPS4-204ENST00000422379 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
HPS4-204ENST00000422379 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
HPS4-204ENST00000422379 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
HPS4-204ENST00000422379 ERVK-7P63135 1459 aa12.96□□□□□ -0.33
HPS4-204ENST00000422379 KCNA4P22459 653 aa12.96□□□□□ -0.33
HPS4-204ENST00000422379 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.34
HPS4-204ENST00000422379 CNTLNQ9NXG0 1405 aa12.95□□□□□ -0.34
HPS4-204ENST00000422379 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
HPS4-204ENST00000422379 MADDQ8WXG6 1647 aa12.95□□□□□ -0.34
HPS4-204ENST00000422379 CEBPAP49715 358 aaPredicted RBP12.94□□□□□ -0.34
HPS4-204ENST00000422379 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
HPS4-204ENST00000422379 SPATA31D1Q6ZQQ2 1576 aa12.93□□□□□ -0.34
HPS4-204ENST00000422379 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
HPS4-204ENST00000422379 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
HPS4-204ENST00000422379 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
HPS4-204ENST00000422379 MROH2AA6NES4 1674 aa12.93□□□□□ -0.34
HPS4-204ENST00000422379 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
HPS4-204ENST00000422379 IDI1Q13907 227 aa12.92□□□□□ -0.34
HPS4-204ENST00000422379 C3P01024 1663 aa12.91□□□□□ -0.34
HPS4-204ENST00000422379 ADGRB3O60242 1522 aa12.91□□□□□ -0.34
HPS4-204ENST00000422379 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
HPS4-204ENST00000422379 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
HPS4-204ENST00000422379 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
HPS4-204ENST00000422379 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
HPS4-204ENST00000422379 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
HPS4-204ENST00000422379 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
HPS4-204ENST00000422379 TNRQ92752 1358 aa12.86□□□□□ -0.35
HPS4-204ENST00000422379 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
HPS4-204ENST00000422379 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
HPS4-204ENST00000422379 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
HPS4-204ENST00000422379 KIF1BO60333 1816 aa12.85□□□□□ -0.35
HPS4-204ENST00000422379 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
HPS4-204ENST00000422379 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
HPS4-204ENST00000422379 ZNF326Q5BKZ1 582 aaKnown RBP12.84□□□□□ -0.35
HPS4-204ENST00000422379 A2ML1A8K2U0 1454 aa12.84□□□□□ -0.35
HPS4-204ENST00000422379 IFT172Q9UG01 1749 aa12.84□□□□□ -0.35
HPS4-204ENST00000422379 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
HPS4-204ENST00000422379 PTPRMP28827 1452 aa12.82□□□□□ -0.36
HPS4-204ENST00000422379 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
HPS4-204ENST00000422379 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
HPS4-204ENST00000422379 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms