RNA–Protein interactions for RNA: ENST00000422117.1

LINC02250-201, Transcript of long intergenic non-protein coding RNA 2250, humanhuman

TSL 1 (best) BASIC

Gene LINC02250, Length 2,491 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02250-201ENST00000422117 TCF3P15923 654 aa11.67□□□□□ -0.54
LINC02250-201ENST00000422117 MLLT3P42568 568 aaPredicted RBP11.67□□□□□ -0.54
LINC02250-201ENST00000422117 FAM43BQ6ZT52 329 aaPredicted RBP11.67□□□□□ -0.54
LINC02250-201ENST00000422117 GPATCH11Q8N954 259 aa11.67□□□□□ -0.54
LINC02250-201ENST00000422117 SPINK5Q9NQ38 1064 aaPredicted RBP11.66□□□□□ -0.54
LINC02250-201ENST00000422117 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
LINC02250-201ENST00000422117 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
LINC02250-201ENST00000422117 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
LINC02250-201ENST00000422117 PEX14O75381 377 aa11.64□□□□□ -0.55
LINC02250-201ENST00000422117 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
LINC02250-201ENST00000422117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.63□□□□□ -0.55
LINC02250-201ENST00000422117 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
LINC02250-201ENST00000422117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC02250-201ENST00000422117 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
LINC02250-201ENST00000422117 SPTY2D1Q68D10 685 aaPredicted RBP11.62□□□□□ -0.55
LINC02250-201ENST00000422117 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
LINC02250-201ENST00000422117 TSR1Q2NL82 804 aaKnown RBP11.6□□□□□ -0.55
LINC02250-201ENST00000422117 RFX1P22670 979 aa11.6□□□□□ -0.55
LINC02250-201ENST00000422117 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
LINC02250-201ENST00000422117 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
LINC02250-201ENST00000422117 VTI1AQ96AJ9 217 aa11.59□□□□□ -0.55
LINC02250-201ENST00000422117 UBXN4Q92575 508 aa11.59□□□□□ -0.55
LINC02250-201ENST00000422117 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
LINC02250-201ENST00000422117 ZNF16P17020 682 aaPredicted RBP11.58□□□□□ -0.56
LINC02250-201ENST00000422117 EVI5LQ96CN4 794 aa11.58□□□□□ -0.56
LINC02250-201ENST00000422117 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
LINC02250-201ENST00000422117 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
LINC02250-201ENST00000422117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC02250-201ENST00000422117 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC02250-201ENST00000422117 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
LINC02250-201ENST00000422117 CDCA7Q9BWT1 371 aaPredicted RBP11.57□□□□□ -0.56
LINC02250-201ENST00000422117 RB1CC1Q8TDY2 1594 aa11.56□□□□□ -0.56
LINC02250-201ENST00000422117 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
LINC02250-201ENST00000422117 NACADO15069 1562 aa11.56□□□□□ -0.56
LINC02250-201ENST00000422117 OS9Q13438 667 aaPredicted RBP11.55□□□□□ -0.56
LINC02250-201ENST00000422117 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
LINC02250-201ENST00000422117 C8orf37Q96NL8 207 aa11.54□□□□□ -0.56
LINC02250-201ENST00000422117 GSE1Q14687 1217 aa11.53□□□□□ -0.56
LINC02250-201ENST00000422117 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
LINC02250-201ENST00000422117 USTQ9Y2C2 406 aa11.53□□□□□ -0.56
LINC02250-201ENST00000422117 CCDC102AQ96A19 550 aa11.53□□□□□ -0.56
LINC02250-201ENST00000422117 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC02250-201ENST00000422117 TERF2IPQ9NYB0 399 aa11.52□□□□□ -0.56
LINC02250-201ENST00000422117 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
LINC02250-201ENST00000422117 DPH6Q7L8W6 267 aa11.52□□□□□ -0.57
LINC02250-201ENST00000422117 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
LINC02250-201ENST00000422117 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
LINC02250-201ENST00000422117 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
LINC02250-201ENST00000422117 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
LINC02250-201ENST00000422117 GLMNQ92990 594 aa11.51□□□□□ -0.57
LINC02250-201ENST00000422117 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
LINC02250-201ENST00000422117 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
LINC02250-201ENST00000422117 TBC1D12O60347 775 aa11.5□□□□□ -0.57
LINC02250-201ENST00000422117 ZC3H6P61129 1189 aaKnown RBP11.5□□□□□ -0.57
LINC02250-201ENST00000422117 RALBP1Q15311 655 aa11.5□□□□□ -0.57
LINC02250-201ENST00000422117 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
LINC02250-201ENST00000422117 MS4A1P11836 297 aa11.49□□□□□ -0.57
LINC02250-201ENST00000422117 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
LINC02250-201ENST00000422117 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
LINC02250-201ENST00000422117 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
LINC02250-201ENST00000422117 GPR37O15354 613 aa11.48□□□□□ -0.57
LINC02250-201ENST00000422117 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
LINC02250-201ENST00000422117 AMHR2Q16671 573 aa11.47□□□□□ -0.57
LINC02250-201ENST00000422117 GIPC2Q8TF65 315 aa11.47□□□□□ -0.57
LINC02250-201ENST00000422117 SNRKQ9NRH2 765 aa11.47□□□□□ -0.57
LINC02250-201ENST00000422117 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
LINC02250-201ENST00000422117 PARNO95453 639 aaKnown RBP11.47□□□□□ -0.57
LINC02250-201ENST00000422117 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
LINC02250-201ENST00000422117 NME8Q8N427 588 aa11.47□□□□□ -0.57
LINC02250-201ENST00000422117 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
LINC02250-201ENST00000422117 MCCP23508 829 aa11.46□□□□□ -0.58
LINC02250-201ENST00000422117 BCL2L13Q9BXK5 485 aa11.46□□□□□ -0.58
LINC02250-201ENST00000422117 GDPD2Q9HCC8 539 aa11.45□□□□□ -0.58
LINC02250-201ENST00000422117 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
LINC02250-201ENST00000422117 PPP1R37O75864 691 aa11.44□□□□□ -0.58
LINC02250-201ENST00000422117 KCNG1Q9UIX4 513 aa11.44□□□□□ -0.58
LINC02250-201ENST00000422117 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
LINC02250-201ENST00000422117 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
LINC02250-201ENST00000422117 MORC4Q8TE76 937 aa11.43□□□□□ -0.58
LINC02250-201ENST00000422117 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
LINC02250-201ENST00000422117 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
LINC02250-201ENST00000422117 FOXD4Q12950 439 aaPredicted RBP11.42□□□□□ -0.58
LINC02250-201ENST00000422117 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
LINC02250-201ENST00000422117 SECISBP2LQ93073 1101 aaKnown RBP11.41□□□□□ -0.58
LINC02250-201ENST00000422117 NUBP1P53384 320 aa11.41□□□□□ -0.58
LINC02250-201ENST00000422117 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.58
LINC02250-201ENST00000422117 OXER1Q8TDS5 423 aa11.4□□□□□ -0.58
LINC02250-201ENST00000422117 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
LINC02250-201ENST00000422117 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
LINC02250-201ENST00000422117 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
LINC02250-201ENST00000422117 PAX3P23760 479 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 GABBR1Q9UBS5 961 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
LINC02250-201ENST00000422117 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
LINC02250-201ENST00000422117 PMM1Q92871 262 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms