RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 PLXNC1O60486 1568 aa20.16■□□□□ 0.82
UFD1-203ENST00000421968 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.81
UFD1-203ENST00000421968 TRIM52Q96A61 297 aa20.14■□□□□ 0.81
UFD1-203ENST00000421968 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
UFD1-203ENST00000421968 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
UFD1-203ENST00000421968 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
UFD1-203ENST00000421968 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
UFD1-203ENST00000421968 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
UFD1-203ENST00000421968 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
UFD1-203ENST00000421968 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
UFD1-203ENST00000421968 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
UFD1-203ENST00000421968 PZPP20742 1482 aa20.05■□□□□ 0.8
UFD1-203ENST00000421968 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
UFD1-203ENST00000421968 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
UFD1-203ENST00000421968 XIRP1Q702N8 1843 aaKnown RBP20.04■□□□□ 0.8
UFD1-203ENST00000421968 MIA2Q96PC5 1412 aa20.04■□□□□ 0.8
UFD1-203ENST00000421968 ZNF772Q68DY9 489 aaPredicted RBP20.02■□□□□ 0.8
UFD1-203ENST00000421968 ROBO1Q9Y6N7 1651 aa20.02■□□□□ 0.8
UFD1-203ENST00000421968 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
UFD1-203ENST00000421968 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
UFD1-203ENST00000421968 JCADQ9P266 1359 aa19.99■□□□□ 0.79
UFD1-203ENST00000421968 ZC3H13Q5T200 1668 aaKnown RBP19.98■□□□□ 0.79
UFD1-203ENST00000421968 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
UFD1-203ENST00000421968 RXRBP28702 533 aa19.97■□□□□ 0.79
UFD1-203ENST00000421968 WASHC2CQ9Y4E1 1318 aa19.96■□□□□ 0.79
UFD1-203ENST00000421968 KDM5DQ9BY66 1539 aa19.95■□□□□ 0.78
UFD1-203ENST00000421968 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
UFD1-203ENST00000421968 KIF3BO15066 747 aa19.94■□□□□ 0.78
UFD1-203ENST00000421968 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
UFD1-203ENST00000421968 PLEKHH2Q8IVE3 1493 aa19.92■□□□□ 0.78
UFD1-203ENST00000421968 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
UFD1-203ENST00000421968 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
UFD1-203ENST00000421968 DHX29Q7Z478 1369 aaKnown RBP19.9■□□□□ 0.78
UFD1-203ENST00000421968 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
UFD1-203ENST00000421968 SCAF11Q99590 1463 aaKnown RBP19.9■□□□□ 0.78
UFD1-203ENST00000421968 GPATCH8Q9UKJ3 1502 aaKnown RBP19.9■□□□□ 0.78
UFD1-203ENST00000421968 LRP6O75581 1613 aa19.9■□□□□ 0.78
UFD1-203ENST00000421968 CDK12Q9NYV4 1490 aaPredicted RBP19.89■□□□□ 0.77
UFD1-203ENST00000421968 CFDP1Q9UEE9 299 aaPredicted RBP19.89■□□□□ 0.77
UFD1-203ENST00000421968 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
UFD1-203ENST00000421968 EEA1Q15075 1411 aa19.87■□□□□ 0.77
UFD1-203ENST00000421968 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
UFD1-203ENST00000421968 LTKP29376 864 aa19.86■□□□□ 0.77
UFD1-203ENST00000421968 TXNDC2Q86VQ3 553 aa19.86■□□□□ 0.77
UFD1-203ENST00000421968 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
UFD1-203ENST00000421968 CCDC18Q5T9S5 1454 aa19.86■□□□□ 0.77
UFD1-203ENST00000421968 FOXD1Q16676 465 aa19.85■□□□□ 0.77
UFD1-203ENST00000421968 PROSER2Q86WR7 435 aaPredicted RBP19.85■□□□□ 0.77
UFD1-203ENST00000421968 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
UFD1-203ENST00000421968 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
UFD1-203ENST00000421968 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
UFD1-203ENST00000421968 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
UFD1-203ENST00000421968 NUTM2BA6NNL0 878 aaPredicted RBP19.8■□□□□ 0.76
UFD1-203ENST00000421968 NUTM2EB1AL46 878 aaPredicted RBP19.8■□□□□ 0.76
UFD1-203ENST00000421968 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
UFD1-203ENST00000421968 NUTM2AQ8IVF1 878 aaPredicted RBP19.8■□□□□ 0.76
UFD1-203ENST00000421968 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
UFD1-203ENST00000421968 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
UFD1-203ENST00000421968 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
UFD1-203ENST00000421968 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
UFD1-203ENST00000421968 KCNA6P17658 529 aa19.79■□□□□ 0.76
UFD1-203ENST00000421968 EID1Q9Y6B2 187 aa19.79■□□□□ 0.76
UFD1-203ENST00000421968 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
UFD1-203ENST00000421968 MSH6P52701 1360 aa19.78■□□□□ 0.76
UFD1-203ENST00000421968 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
UFD1-203ENST00000421968 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
UFD1-203ENST00000421968 RGS12O14924 1447 aa19.76■□□□□ 0.75
UFD1-203ENST00000421968 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
UFD1-203ENST00000421968 ERVK-7P63135 1459 aa19.75■□□□□ 0.75
UFD1-203ENST00000421968 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
UFD1-203ENST00000421968 SLIT1O75093 1534 aa19.75■□□□□ 0.75
UFD1-203ENST00000421968 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
UFD1-203ENST00000421968 AFF2P51816 1311 aa19.75■□□□□ 0.75
UFD1-203ENST00000421968 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
UFD1-203ENST00000421968 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
UFD1-203ENST00000421968 PRDM15P57071 1507 aaPredicted RBP19.72■□□□□ 0.75
UFD1-203ENST00000421968 TIAM1Q13009 1591 aa19.71■□□□□ 0.75
UFD1-203ENST00000421968 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
UFD1-203ENST00000421968 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
UFD1-203ENST00000421968 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
UFD1-203ENST00000421968 SLC26A8Q96RN1 970 aa19.69■□□□□ 0.74
UFD1-203ENST00000421968 QTRT2Q9H974 415 aaKnown RBP19.69■□□□□ 0.74
UFD1-203ENST00000421968 ABCC3O15438 1527 aa19.67■□□□□ 0.74
UFD1-203ENST00000421968 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
UFD1-203ENST00000421968 TMEM2Q9UHN6 1383 aa19.64■□□□□ 0.73
UFD1-203ENST00000421968 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
UFD1-203ENST00000421968 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
UFD1-203ENST00000421968 C8orf37Q96NL8 207 aa19.61■□□□□ 0.73
UFD1-203ENST00000421968 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
UFD1-203ENST00000421968 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
UFD1-203ENST00000421968 NGLY1Q96IV0 654 aa19.6■□□□□ 0.73
UFD1-203ENST00000421968 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
UFD1-203ENST00000421968 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
UFD1-203ENST00000421968 TET3O43151 1660 aa19.58■□□□□ 0.72
UFD1-203ENST00000421968 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
UFD1-203ENST00000421968 BCANQ96GW7 911 aa19.57■□□□□ 0.72
UFD1-203ENST00000421968 PIK3C2BO00750 1634 aa19.55■□□□□ 0.72
UFD1-203ENST00000421968 CEP152O94986 1710 aa19.55■□□□□ 0.72
UFD1-203ENST00000421968 DIP2AQ14689 1571 aa19.55■□□□□ 0.72
UFD1-203ENST00000421968 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms