RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 PLXNC1O60486 1568 aa19.02■□□□□ 0.64
LINC00899-201ENST00000421538 L3MBTL2Q969R5 705 aa19.02■□□□□ 0.64
LINC00899-201ENST00000421538 EIF4G2P78344 907 aaKnown RBP eCLIP19.01■□□□□ 0.63
LINC00899-201ENST00000421538 NBR1Q14596 966 aa19.01■□□□□ 0.63
LINC00899-201ENST00000421538 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
LINC00899-201ENST00000421538 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
LINC00899-201ENST00000421538 KDM5DQ9BY66 1539 aa19.01■□□□□ 0.63
LINC00899-201ENST00000421538 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
LINC00899-201ENST00000421538 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
LINC00899-201ENST00000421538 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
LINC00899-201ENST00000421538 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
LINC00899-201ENST00000421538 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
LINC00899-201ENST00000421538 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
LINC00899-201ENST00000421538 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
LINC00899-201ENST00000421538 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
LINC00899-201ENST00000421538 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
LINC00899-201ENST00000421538 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
LINC00899-201ENST00000421538 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
LINC00899-201ENST00000421538 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
LINC00899-201ENST00000421538 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
LINC00899-201ENST00000421538 ZFYVE16Q7Z3T8 1539 aa18.94■□□□□ 0.62
LINC00899-201ENST00000421538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.62
LINC00899-201ENST00000421538 UNC13BO14795 1591 aa18.94■□□□□ 0.62
LINC00899-201ENST00000421538 CD109Q6YHK3 1445 aa18.93■□□□□ 0.62
LINC00899-201ENST00000421538 CCDC7Q96M83 1385 aa18.93■□□□□ 0.62
LINC00899-201ENST00000421538 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
LINC00899-201ENST00000421538 RTEL1-TNFRSF6BF6WH68 1400 aa18.92■□□□□ 0.62
LINC00899-201ENST00000421538 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
LINC00899-201ENST00000421538 PRKRIP1Q9H875 184 aaPredicted RBP18.91■□□□□ 0.62
LINC00899-201ENST00000421538 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
LINC00899-201ENST00000421538 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.62
LINC00899-201ENST00000421538 INO80Q9ULG1 1556 aaPredicted RBP18.89■□□□□ 0.61
LINC00899-201ENST00000421538 ATP7AQ04656 1500 aa18.89■□□□□ 0.61
LINC00899-201ENST00000421538 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
LINC00899-201ENST00000421538 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
LINC00899-201ENST00000421538 MAGI2Q86UL8 1455 aa18.87■□□□□ 0.61
LINC00899-201ENST00000421538 ANO8Q9HCE9 1232 aaPredicted RBP18.87■□□□□ 0.61
LINC00899-201ENST00000421538 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
LINC00899-201ENST00000421538 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
LINC00899-201ENST00000421538 IPO9Q96P70 1041 aaKnown RBP18.84■□□□□ 0.61
LINC00899-201ENST00000421538 KIF7Q2M1P5 1343 aa18.84■□□□□ 0.61
LINC00899-201ENST00000421538 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.61
LINC00899-201ENST00000421538 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
LINC00899-201ENST00000421538 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
LINC00899-201ENST00000421538 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
LINC00899-201ENST00000421538 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
LINC00899-201ENST00000421538 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
LINC00899-201ENST00000421538 CFAP74Q9C0B2 1584 aa18.8■□□□□ 0.6
LINC00899-201ENST00000421538 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
LINC00899-201ENST00000421538 DHX29Q7Z478 1369 aaKnown RBP18.78■□□□□ 0.6
LINC00899-201ENST00000421538 KIF3BO15066 747 aa18.77■□□□□ 0.6
LINC00899-201ENST00000421538 MAP3K4Q9Y6R4 1608 aa18.77■□□□□ 0.6
LINC00899-201ENST00000421538 KDM5CP41229 1560 aa18.77■□□□□ 0.59
LINC00899-201ENST00000421538 DEPDC5O75140 1603 aa18.76■□□□□ 0.59
LINC00899-201ENST00000421538 CNGB1Q14028 1251 aaPredicted RBP18.76■□□□□ 0.59
LINC00899-201ENST00000421538 NEO1Q92859 1461 aa18.76■□□□□ 0.59
LINC00899-201ENST00000421538 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
LINC00899-201ENST00000421538 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
LINC00899-201ENST00000421538 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
LINC00899-201ENST00000421538 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
LINC00899-201ENST00000421538 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
LINC00899-201ENST00000421538 GLI2P10070 1586 aa18.73■□□□□ 0.59
LINC00899-201ENST00000421538 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
LINC00899-201ENST00000421538 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
LINC00899-201ENST00000421538 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
LINC00899-201ENST00000421538 E9PCH4 1651 aa18.72■□□□□ 0.59
LINC00899-201ENST00000421538 BCORL1Q5H9F3 1711 aa18.72■□□□□ 0.59
LINC00899-201ENST00000421538 MROH1Q8NDA8 1641 aa18.72■□□□□ 0.59
LINC00899-201ENST00000421538 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
LINC00899-201ENST00000421538 DCAF11Q8TEB1 546 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 DIP2BQ9P265 1576 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 ATP10AO60312 1499 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 HECW2Q9P2P5 1572 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
LINC00899-201ENST00000421538 A2MP01023 1474 aa18.7■□□□□ 0.58
LINC00899-201ENST00000421538 UHRF1BP1Q6BDS2 1440 aa18.7■□□□□ 0.58
LINC00899-201ENST00000421538 SMG6Q86US8 1419 aaKnown RBP18.7■□□□□ 0.58
LINC00899-201ENST00000421538 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
LINC00899-201ENST00000421538 IL27Q8NEV9 243 aa18.69■□□□□ 0.58
LINC00899-201ENST00000421538 FRMPD1Q5SYB0 1578 aa18.69■□□□□ 0.58
LINC00899-201ENST00000421538 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
LINC00899-201ENST00000421538 ABCA6Q8N139 1617 aa18.68■□□□□ 0.58
LINC00899-201ENST00000421538 USP47Q96K76 1375 aa18.67■□□□□ 0.58
LINC00899-201ENST00000421538 KANK1Q14678 1352 aa18.67■□□□□ 0.58
LINC00899-201ENST00000421538 TET3O43151 1660 aa18.67■□□□□ 0.58
LINC00899-201ENST00000421538 SENP3-EIF4A1A0A087X0R7 540 aa18.66■□□□□ 0.58
LINC00899-201ENST00000421538 RICTORQ6R327 1708 aa18.66■□□□□ 0.58
LINC00899-201ENST00000421538 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
LINC00899-201ENST00000421538 TSPOAP1O95153 1857 aa18.64■□□□□ 0.57
LINC00899-201ENST00000421538 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
LINC00899-201ENST00000421538 RNF123Q5XPI4 1314 aa18.63■□□□□ 0.57
LINC00899-201ENST00000421538 PTPRTO14522 1441 aa18.63■□□□□ 0.57
LINC00899-201ENST00000421538 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
LINC00899-201ENST00000421538 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
LINC00899-201ENST00000421538 PPRC1Q5VV67 1664 aaKnown RBP18.62■□□□□ 0.57
LINC00899-201ENST00000421538 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
LINC00899-201ENST00000421538 TRPM2O94759 1503 aa18.62■□□□□ 0.57
LINC00899-201ENST00000421538 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
LINC00899-201ENST00000421538 GGT6Q6P531 493 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms