RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 PIAS4Q8N2W9 510 aaPredicted RBP9.57□□□□□ -0.88
HDAC8-212ENST00000421523 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
HDAC8-212ENST00000421523 EP400Q96L91 3159 aa9.56□□□□□ -0.88
HDAC8-212ENST00000421523 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
HDAC8-212ENST00000421523 LRP6O75581 1613 aa9.56□□□□□ -0.88
HDAC8-212ENST00000421523 PREX2Q70Z35 1606 aa9.56□□□□□ -0.88
HDAC8-212ENST00000421523 UGGT1Q9NYU2 1555 aa9.55□□□□□ -0.88
HDAC8-212ENST00000421523 ZNF772Q68DY9 489 aaPredicted RBP9.55□□□□□ -0.88
HDAC8-212ENST00000421523 FAM135AQ9P2D6 1515 aa9.55□□□□□ -0.88
HDAC8-212ENST00000421523 SPAG9O60271 1321 aaKnown RBP9.55□□□□□ -0.88
HDAC8-212ENST00000421523 PHLPP1O60346 1717 aa9.54□□□□□ -0.88
HDAC8-212ENST00000421523 RXRBP28702 533 aa9.54□□□□□ -0.88
HDAC8-212ENST00000421523 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
HDAC8-212ENST00000421523 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
HDAC8-212ENST00000421523 CLIP1P30622 1438 aa9.54□□□□□ -0.88
HDAC8-212ENST00000421523 A2MP01023 1474 aa9.53□□□□□ -0.88
HDAC8-212ENST00000421523 JCADQ9P266 1359 aa9.53□□□□□ -0.88
HDAC8-212ENST00000421523 ATP7AQ04656 1500 aa9.53□□□□□ -0.88
HDAC8-212ENST00000421523 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
HDAC8-212ENST00000421523 TROQ12816 1431 aaPredicted RBP9.53□□□□□ -0.88
HDAC8-212ENST00000421523 SYCP2Q9BX26 1530 aa9.52□□□□□ -0.88
HDAC8-212ENST00000421523 ZC3H13Q5T200 1668 aaKnown RBP9.52□□□□□ -0.89
HDAC8-212ENST00000421523 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
HDAC8-212ENST00000421523 ZNF777Q9ULD5 760 aaPredicted RBP9.51□□□□□ -0.89
HDAC8-212ENST00000421523 CDK12Q9NYV4 1490 aaPredicted RBP9.51□□□□□ -0.89
HDAC8-212ENST00000421523 RGS12O14924 1447 aa9.5□□□□□ -0.89
HDAC8-212ENST00000421523 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
HDAC8-212ENST00000421523 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
HDAC8-212ENST00000421523 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
HDAC8-212ENST00000421523 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
HDAC8-212ENST00000421523 PZPP20742 1482 aa9.5□□□□□ -0.89
HDAC8-212ENST00000421523 NLRP1Q9C000 1473 aa9.5□□□□□ -0.89
HDAC8-212ENST00000421523 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
HDAC8-212ENST00000421523 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
HDAC8-212ENST00000421523 LRRC9Q6ZRR7 1453 aa9.48□□□□□ -0.89
HDAC8-212ENST00000421523 KDM5DQ9BY66 1539 aa9.48□□□□□ -0.89
HDAC8-212ENST00000421523 COL16A1Q07092 1604 aaPredicted RBP9.48□□□□□ -0.89
HDAC8-212ENST00000421523 CDC42BPAQ5VT25 1732 aa9.48□□□□□ -0.89
HDAC8-212ENST00000421523 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
HDAC8-212ENST00000421523 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC8-212ENST00000421523 MAP3K1Q13233 1512 aa9.46□□□□□ -0.89
HDAC8-212ENST00000421523 ADGBQ8N7X0 1667 aa9.46□□□□□ -0.89
HDAC8-212ENST00000421523 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
HDAC8-212ENST00000421523 SPATA31A6Q5VVP1 1343 aa9.46□□□□□ -0.9
HDAC8-212ENST00000421523 SCAF11Q99590 1463 aaKnown RBP9.46□□□□□ -0.9
HDAC8-212ENST00000421523 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
HDAC8-212ENST00000421523 AFF2P51816 1311 aa9.44□□□□□ -0.9
HDAC8-212ENST00000421523 ATAD2Q6PL18 1390 aa9.44□□□□□ -0.9
HDAC8-212ENST00000421523 ADRA2BP18089 450 aa9.43□□□□□ -0.9
HDAC8-212ENST00000421523 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 FMN1Q68DA7 1419 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 FGD6Q6ZV73 1430 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
HDAC8-212ENST00000421523 EEA1Q15075 1411 aa9.41□□□□□ -0.9
HDAC8-212ENST00000421523 LTKP29376 864 aa9.41□□□□□ -0.9
HDAC8-212ENST00000421523 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
HDAC8-212ENST00000421523 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
HDAC8-212ENST00000421523 MSH6P52701 1360 aa9.4□□□□□ -0.9
HDAC8-212ENST00000421523 UBR1Q8IWV7 1749 aa9.4□□□□□ -0.9
HDAC8-212ENST00000421523 KIF3BO15066 747 aa9.4□□□□□ -0.9
HDAC8-212ENST00000421523 RBM6P78332 1123 aaKnown RBP9.4□□□□□ -0.9
HDAC8-212ENST00000421523 TXNDC2Q86VQ3 553 aa9.4□□□□□ -0.9
HDAC8-212ENST00000421523 LRP5O75197 1615 aa9.4□□□□□ -0.9
HDAC8-212ENST00000421523 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
HDAC8-212ENST00000421523 PRDM15P57071 1507 aaPredicted RBP9.38□□□□□ -0.91
HDAC8-212ENST00000421523 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
HDAC8-212ENST00000421523 NCOA2Q15596 1464 aa9.38□□□□□ -0.91
HDAC8-212ENST00000421523 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
HDAC8-212ENST00000421523 ERVK-7P63135 1459 aa9.36□□□□□ -0.91
HDAC8-212ENST00000421523 PLEKHH2Q8IVE3 1493 aa9.36□□□□□ -0.91
HDAC8-212ENST00000421523 KIAA1107Q9UPP5 1409 aa9.36□□□□□ -0.91
HDAC8-212ENST00000421523 DHX29Q7Z478 1369 aaKnown RBP9.36□□□□□ -0.91
HDAC8-212ENST00000421523 SLIT1O75093 1534 aa9.36□□□□□ -0.91
HDAC8-212ENST00000421523 ARHGAP23Q9P227 1491 aa9.35□□□□□ -0.91
HDAC8-212ENST00000421523 AHDC1Q5TGY3 1603 aaPredicted RBP9.35□□□□□ -0.91
HDAC8-212ENST00000421523 KCNA6P17658 529 aa9.35□□□□□ -0.91
HDAC8-212ENST00000421523 YY1P25490 414 aa9.35□□□□□ -0.91
HDAC8-212ENST00000421523 SLC26A8Q96RN1 970 aa9.35□□□□□ -0.91
HDAC8-212ENST00000421523 EID1Q9Y6B2 187 aa9.35□□□□□ -0.91
HDAC8-212ENST00000421523 KDM5AP29375 1690 aaKnown RBP9.35□□□□□ -0.91
HDAC8-212ENST00000421523 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
HDAC8-212ENST00000421523 NGLY1Q96IV0 654 aa9.34□□□□□ -0.91
HDAC8-212ENST00000421523 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
HDAC8-212ENST00000421523 CFDP1Q9UEE9 299 aaPredicted RBP9.34□□□□□ -0.91
HDAC8-212ENST00000421523 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
HDAC8-212ENST00000421523 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
HDAC8-212ENST00000421523 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
HDAC8-212ENST00000421523 CEP350Q5VT06 3117 aa9.32□□□□□ -0.92
HDAC8-212ENST00000421523 ABCC3O15438 1527 aa9.32□□□□□ -0.92
HDAC8-212ENST00000421523 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
HDAC8-212ENST00000421523 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
HDAC8-212ENST00000421523 CCDC18Q5T9S5 1454 aa9.32□□□□□ -0.92
HDAC8-212ENST00000421523 PSDA5PKW4 1024 aaPredicted RBP9.31□□□□□ -0.92
HDAC8-212ENST00000421523 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
HDAC8-212ENST00000421523 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
HDAC8-212ENST00000421523 MAST1Q9Y2H9 1570 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 TMEM2Q9UHN6 1383 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms