RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 CHIC2Q9UKJ5 165 aa27.15■■□□□ 1.94
TNFAIP3-203ENST00000421450 DNMT1P26358 1616 aaKnown RBP27.15■■□□□ 1.94
TNFAIP3-203ENST00000421450 KIF15Q9NS87 1388 aa27.13■■□□□ 1.93
TNFAIP3-203ENST00000421450 KDM5DQ9BY66 1539 aa27.13■■□□□ 1.93
TNFAIP3-203ENST00000421450 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
TNFAIP3-203ENST00000421450 DUOX2Q9NRD8 1548 aa27.12■■□□□ 1.93
TNFAIP3-203ENST00000421450 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
TNFAIP3-203ENST00000421450 FAM135AQ9P2D6 1515 aa27.1■■□□□ 1.93
TNFAIP3-203ENST00000421450 EIF2AK4Q9P2K8 1649 aaKnown RBP27.09■■□□□ 1.93
TNFAIP3-203ENST00000421450 ANKRD30AQ9BXX3 1397 aa27.09■■□□□ 1.93
TNFAIP3-203ENST00000421450 DMRT2Q9Y5R5 561 aa27.07■■□□□ 1.92
TNFAIP3-203ENST00000421450 RNF17Q9BXT8 1623 aaKnown RBP27.07■■□□□ 1.92
TNFAIP3-203ENST00000421450 FBXO31Q5XUX0 539 aaPredicted RBP27.06■■□□□ 1.92
TNFAIP3-203ENST00000421450 MYO3AQ8NEV4 1616 aa27.04■■□□□ 1.92
TNFAIP3-203ENST00000421450 ERBINQ96RT1 1412 aa27.03■■□□□ 1.92
TNFAIP3-203ENST00000421450 STRCQ7RTU9 1775 aa27.02■■□□□ 1.92
TNFAIP3-203ENST00000421450 PZPP20742 1482 aa27.02■■□□□ 1.92
TNFAIP3-203ENST00000421450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.02■■□□□ 1.92
TNFAIP3-203ENST00000421450 TNRQ92752 1358 aa27.01■■□□□ 1.91
TNFAIP3-203ENST00000421450 ILDR1Q86SU0 546 aaPredicted RBP27.01■■□□□ 1.91
TNFAIP3-203ENST00000421450 ZC3H13Q5T200 1668 aaKnown RBP26.99■■□□□ 1.91
TNFAIP3-203ENST00000421450 CAMSAP1Q5T5Y3 1602 aa26.99■■□□□ 1.91
TNFAIP3-203ENST00000421450 CEP170BQ9Y4F5 1589 aaPredicted RBP26.99■■□□□ 1.91
TNFAIP3-203ENST00000421450 ABCC3O15438 1527 aa26.99■■□□□ 1.91
TNFAIP3-203ENST00000421450 ZNF142P52746 1687 aaPredicted RBP26.98■■□□□ 1.91
TNFAIP3-203ENST00000421450 NCOA1Q15788 1441 aa26.98■■□□□ 1.91
TNFAIP3-203ENST00000421450 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
TNFAIP3-203ENST00000421450 CEP152O94986 1710 aa26.96■■□□□ 1.91
TNFAIP3-203ENST00000421450 KANK1Q14678 1352 aa26.96■■□□□ 1.91
TNFAIP3-203ENST00000421450 A2ML1A8K2U0 1454 aa26.94■■□□□ 1.9
TNFAIP3-203ENST00000421450 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
TNFAIP3-203ENST00000421450 ITGAEP38570 1179 aa26.93■■□□□ 1.9
TNFAIP3-203ENST00000421450 NCKAP5LQ9HCH0 1330 aa26.92■■□□□ 1.9
TNFAIP3-203ENST00000421450 PTPRTO14522 1441 aa26.91■■□□□ 1.9
TNFAIP3-203ENST00000421450 CFAP65Q6ZU64 1925 aaKnown RBP26.91■■□□□ 1.9
TNFAIP3-203ENST00000421450 PRDM15P57071 1507 aaPredicted RBP26.9■■□□□ 1.9
TNFAIP3-203ENST00000421450 PKD2Q13563 968 aa26.88■■□□□ 1.89
TNFAIP3-203ENST00000421450 PLA2R1Q13018 1463 aa26.87■■□□□ 1.89
TNFAIP3-203ENST00000421450 DEPDC5O75140 1603 aa26.87■■□□□ 1.89
TNFAIP3-203ENST00000421450 CERKQ8TCT0 537 aa26.86■■□□□ 1.89
TNFAIP3-203ENST00000421450 FBXO41Q8TF61 875 aa26.86■■□□□ 1.89
TNFAIP3-203ENST00000421450 ANKRD50Q9ULJ7 1429 aa26.86■■□□□ 1.89
TNFAIP3-203ENST00000421450 NLRP1Q9C000 1473 aa26.86■■□□□ 1.89
TNFAIP3-203ENST00000421450 ERVK-7P63135 1459 aa26.85■■□□□ 1.89
TNFAIP3-203ENST00000421450 THEMISQ8N1K5 641 aaPredicted RBP26.84■■□□□ 1.89
TNFAIP3-203ENST00000421450 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
TNFAIP3-203ENST00000421450 UGGT1Q9NYU2 1555 aa26.81■■□□□ 1.88
TNFAIP3-203ENST00000421450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.8■■□□□ 1.88
TNFAIP3-203ENST00000421450 ARHGAP31Q2M1Z3 1444 aa26.8■■□□□ 1.88
TNFAIP3-203ENST00000421450 ROCK1Q13464 1354 aa26.78■■□□□ 1.88
TNFAIP3-203ENST00000421450 ANKLE2Q86XL3 938 aa26.77■■□□□ 1.88
TNFAIP3-203ENST00000421450 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
TNFAIP3-203ENST00000421450 LMTK2Q8IWU2 1503 aa26.75■■□□□ 1.87
TNFAIP3-203ENST00000421450 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
TNFAIP3-203ENST00000421450 STAG3Q9UJ98 1225 aa26.71■■□□□ 1.87
TNFAIP3-203ENST00000421450 RRBP1Q9P2E9 1410 aaKnown RBP26.71■■□□□ 1.87
TNFAIP3-203ENST00000421450 ZNF335Q9H4Z2 1342 aaPredicted RBP26.69■■□□□ 1.86
TNFAIP3-203ENST00000421450 EFCAB6Q5THR3 1501 aa26.69■■□□□ 1.86
TNFAIP3-203ENST00000421450 UNC13BO14795 1591 aa26.66■■□□□ 1.86
TNFAIP3-203ENST00000421450 LTBP4Q8N2S1 1624 aa26.65■■□□□ 1.86
TNFAIP3-203ENST00000421450 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
TNFAIP3-203ENST00000421450 NEURL4Q96JN8 1562 aa26.65■■□□□ 1.86
TNFAIP3-203ENST00000421450 NPHP4O75161 1426 aaPredicted RBP26.64■■□□□ 1.85
TNFAIP3-203ENST00000421450 TET3O43151 1660 aa26.63■■□□□ 1.85
TNFAIP3-203ENST00000421450 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
TNFAIP3-203ENST00000421450 NUP155O75694 1391 aa26.62■■□□□ 1.85
TNFAIP3-203ENST00000421450 IDI1Q13907 227 aa26.62■■□□□ 1.85
TNFAIP3-203ENST00000421450 NOS1P29475 1434 aa26.6■■□□□ 1.85
TNFAIP3-203ENST00000421450 TXNDC2Q86VQ3 553 aa26.6■■□□□ 1.85
TNFAIP3-203ENST00000421450 RPRD2Q5VT52 1461 aaKnown RBP26.6■■□□□ 1.85
TNFAIP3-203ENST00000421450 SYNMO15061 1565 aa26.59■■□□□ 1.85
TNFAIP3-203ENST00000421450 EID1Q9Y6B2 187 aa26.59■■□□□ 1.85
TNFAIP3-203ENST00000421450 GCC2Q8IWJ2 1684 aa26.59■■□□□ 1.85
TNFAIP3-203ENST00000421450 SLC52A1Q9NWF4 448 aa26.58■■□□□ 1.85
TNFAIP3-203ENST00000421450 MED14O60244 1454 aa26.57■■□□□ 1.84
TNFAIP3-203ENST00000421450 IQGAP1P46940 1657 aa26.57■■□□□ 1.84
TNFAIP3-203ENST00000421450 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
TNFAIP3-203ENST00000421450 IQGAP3Q86VI3 1631 aa26.55■■□□□ 1.84
TNFAIP3-203ENST00000421450 LTKP29376 864 aa26.53■■□□□ 1.84
TNFAIP3-203ENST00000421450 SLIT1O75093 1534 aa26.53■■□□□ 1.84
TNFAIP3-203ENST00000421450 IQSEC2Q5JU85 1478 aa26.52■■□□□ 1.84
TNFAIP3-203ENST00000421450 ARHGAP23Q9P227 1491 aa26.52■■□□□ 1.84
TNFAIP3-203ENST00000421450 TMEM2Q9UHN6 1383 aa26.52■■□□□ 1.84
TNFAIP3-203ENST00000421450 E9PCH4 1651 aa26.51■■□□□ 1.83
TNFAIP3-203ENST00000421450 CHGAP10645 457 aaKnown RBP26.51■■□□□ 1.83
TNFAIP3-203ENST00000421450 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
TNFAIP3-203ENST00000421450 ADGRB3O60242 1522 aa26.49■■□□□ 1.83
TNFAIP3-203ENST00000421450 NAIPQ13075 1403 aa26.49■■□□□ 1.83
TNFAIP3-203ENST00000421450 TRIM52Q96A61 297 aa26.47■■□□□ 1.83
TNFAIP3-203ENST00000421450 CPS1P31327 1500 aa26.46■■□□□ 1.83
TNFAIP3-203ENST00000421450 UBAP1LF5GYI3 381 aa26.45■■□□□ 1.82
TNFAIP3-203ENST00000421450 BCANQ96GW7 911 aa26.45■■□□□ 1.82
TNFAIP3-203ENST00000421450 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
TNFAIP3-203ENST00000421450 PPP1R15AO75807 674 aaPredicted RBP26.41■■□□□ 1.82
TNFAIP3-203ENST00000421450 HDGFP51858 240 aaKnown RBP26.41■■□□□ 1.82
TNFAIP3-203ENST00000421450 MYO5BQ9ULV0 1848 aa26.41■■□□□ 1.82
TNFAIP3-203ENST00000421450 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
TNFAIP3-203ENST00000421450 TMEM131LA2VDJ0 1609 aa26.37■■□□□ 1.81
TNFAIP3-203ENST00000421450 SLC26A8Q96RN1 970 aa26.36■■□□□ 1.81
TNFAIP3-203ENST00000421450 RIMS2Q9UQ26 1411 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms