RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 FOXD1Q16676 465 aa26.08■■□□□ 1.77
PPFIA3-202ENST00000421230 SIN3AQ96ST3 1273 aa26.08■■□□□ 1.77
PPFIA3-202ENST00000421230 MLH3Q9UHC1 1453 aa26.08■■□□□ 1.77
PPFIA3-202ENST00000421230 FRMPD1Q5SYB0 1578 aa26.07■■□□□ 1.76
PPFIA3-202ENST00000421230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
PPFIA3-202ENST00000421230 DHX29Q7Z478 1369 aaKnown RBP26.03■■□□□ 1.76
PPFIA3-202ENST00000421230 UNC13BO14795 1591 aa26.01■■□□□ 1.76
PPFIA3-202ENST00000421230 ABCA6Q8N139 1617 aa26.01■■□□□ 1.76
PPFIA3-202ENST00000421230 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
PPFIA3-202ENST00000421230 COL17A1Q9UMD9 1497 aaPredicted RBP26.01■■□□□ 1.75
PPFIA3-202ENST00000421230 A2MP01023 1474 aa25.99■■□□□ 1.75
PPFIA3-202ENST00000421230 PKD2Q13563 968 aa25.99■■□□□ 1.75
PPFIA3-202ENST00000421230 KIF3BO15066 747 aa25.98■■□□□ 1.75
PPFIA3-202ENST00000421230 YEATS2Q9ULM3 1422 aa25.98■■□□□ 1.75
PPFIA3-202ENST00000421230 FAM135AQ9P2D6 1515 aa25.96■■□□□ 1.75
PPFIA3-202ENST00000421230 DIP2CQ9Y2E4 1556 aa25.95■■□□□ 1.75
PPFIA3-202ENST00000421230 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.74
PPFIA3-202ENST00000421230 MAGI2Q86UL8 1455 aa25.94■■□□□ 1.74
PPFIA3-202ENST00000421230 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
PPFIA3-202ENST00000421230 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
PPFIA3-202ENST00000421230 ANKRD30BQ9BXX2 1392 aa25.91■■□□□ 1.74
PPFIA3-202ENST00000421230 DEPDC5O75140 1603 aa25.91■■□□□ 1.74
PPFIA3-202ENST00000421230 SUPT16HQ9Y5B9 1047 aaKnown RBP25.87■■□□□ 1.73
PPFIA3-202ENST00000421230 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
PPFIA3-202ENST00000421230 GGT6Q6P531 493 aa25.84■■□□□ 1.73
PPFIA3-202ENST00000421230 KANK1Q14678 1352 aa25.82■■□□□ 1.72
PPFIA3-202ENST00000421230 PRDM15P57071 1507 aaPredicted RBP25.82■■□□□ 1.72
PPFIA3-202ENST00000421230 ATP10AO60312 1499 aa25.82■■□□□ 1.72
PPFIA3-202ENST00000421230 RNF17Q9BXT8 1623 aaKnown RBP25.81■■□□□ 1.72
PPFIA3-202ENST00000421230 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
PPFIA3-202ENST00000421230 VWDEQ8N2E2 1590 aa25.8■■□□□ 1.72
PPFIA3-202ENST00000421230 BCORL1Q5H9F3 1711 aa25.79■■□□□ 1.72
PPFIA3-202ENST00000421230 TIMELESSQ9UNS1 1208 aa25.77■■□□□ 1.72
PPFIA3-202ENST00000421230 RPRD2Q5VT52 1461 aaKnown RBP25.77■■□□□ 1.72
PPFIA3-202ENST00000421230 ARHGEF40Q8TER5 1519 aa25.75■■□□□ 1.71
PPFIA3-202ENST00000421230 E9PCH4 1651 aa25.75■■□□□ 1.71
PPFIA3-202ENST00000421230 TET3O43151 1660 aa25.74■■□□□ 1.71
PPFIA3-202ENST00000421230 CEP152O94986 1710 aa25.74■■□□□ 1.71
PPFIA3-202ENST00000421230 SIGLEC1Q9BZZ2 1709 aa25.73■■□□□ 1.71
PPFIA3-202ENST00000421230 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
PPFIA3-202ENST00000421230 REREQ9P2R6 1566 aa25.7■■□□□ 1.71
PPFIA3-202ENST00000421230 WASHC2CQ9Y4E1 1318 aa25.7■■□□□ 1.7
PPFIA3-202ENST00000421230 PPP1R15AO75807 674 aaPredicted RBP25.69■■□□□ 1.7
PPFIA3-202ENST00000421230 L3MBTL2Q969R5 705 aa25.68■■□□□ 1.7
PPFIA3-202ENST00000421230 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
PPFIA3-202ENST00000421230 ABCC3O15438 1527 aa25.66■■□□□ 1.7
PPFIA3-202ENST00000421230 EFCAB6Q5THR3 1501 aa25.66■■□□□ 1.7
PPFIA3-202ENST00000421230 CCDC144AA2RUR9 1427 aa25.65■■□□□ 1.7
PPFIA3-202ENST00000421230 AGLP35573 1532 aa25.65■■□□□ 1.7
PPFIA3-202ENST00000421230 MLECQ14165 292 aa25.64■■□□□ 1.69
PPFIA3-202ENST00000421230 SPHKAPQ2M3C7 1700 aa25.62■■□□□ 1.69
PPFIA3-202ENST00000421230 TSHZ2Q9NRE2 1034 aa25.62■■□□□ 1.69
PPFIA3-202ENST00000421230 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
PPFIA3-202ENST00000421230 CAMSAP1Q5T5Y3 1602 aa25.6■■□□□ 1.69
PPFIA3-202ENST00000421230 PTPRTO14522 1441 aa25.59■■□□□ 1.69
PPFIA3-202ENST00000421230 NPATQ14207 1427 aa25.59■■□□□ 1.69
PPFIA3-202ENST00000421230 ARID4BQ4LE39 1312 aaPredicted RBP25.59■■□□□ 1.69
PPFIA3-202ENST00000421230 TRPM2O94759 1503 aa25.58■■□□□ 1.69
PPFIA3-202ENST00000421230 ZC3H13Q5T200 1668 aaKnown RBP25.57■■□□□ 1.68
PPFIA3-202ENST00000421230 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
PPFIA3-202ENST00000421230 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
PPFIA3-202ENST00000421230 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
PPFIA3-202ENST00000421230 CLTCQ00610 1675 aaKnown RBP25.5■■□□□ 1.67
PPFIA3-202ENST00000421230 PPP6R1Q9UPN7 881 aa25.49■■□□□ 1.67
PPFIA3-202ENST00000421230 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
PPFIA3-202ENST00000421230 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
PPFIA3-202ENST00000421230 KDM2AQ9Y2K7 1162 aa25.48■■□□□ 1.67
PPFIA3-202ENST00000421230 ARHGAP31Q2M1Z3 1444 aa25.48■■□□□ 1.67
PPFIA3-202ENST00000421230 ZNF326Q5BKZ1 582 aaKnown RBP25.47■■□□□ 1.67
PPFIA3-202ENST00000421230 SPATA31E1Q6ZUB1 1445 aa25.45■■□□□ 1.66
PPFIA3-202ENST00000421230 FBXO31Q5XUX0 539 aaPredicted RBP25.44■■□□□ 1.66
PPFIA3-202ENST00000421230 NOS1P29475 1434 aa25.44■■□□□ 1.66
PPFIA3-202ENST00000421230 CNTLNQ9NXG0 1405 aa25.44■■□□□ 1.66
PPFIA3-202ENST00000421230 ESF1Q9H501 851 aaKnown RBP25.43■■□□□ 1.66
PPFIA3-202ENST00000421230 ANP32EQ9BTT0 268 aa25.41■■□□□ 1.66
PPFIA3-202ENST00000421230 SYNMO15061 1565 aa25.41■■□□□ 1.66
PPFIA3-202ENST00000421230 PREX1Q8TCU6 1659 aa25.4■■□□□ 1.66
PPFIA3-202ENST00000421230 KIF1BO60333 1816 aa25.39■■□□□ 1.65
PPFIA3-202ENST00000421230 CHGAP10645 457 aaKnown RBP25.38■■□□□ 1.65
PPFIA3-202ENST00000421230 ZMYM3Q14202 1370 aa25.36■■□□□ 1.65
PPFIA3-202ENST00000421230 UHRF1BP1Q6BDS2 1440 aa25.35■■□□□ 1.65
PPFIA3-202ENST00000421230 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
PPFIA3-202ENST00000421230 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
PPFIA3-202ENST00000421230 ERVK-7P63135 1459 aa25.35■■□□□ 1.65
PPFIA3-202ENST00000421230 PIK3C2BO00750 1634 aa25.34■■□□□ 1.65
PPFIA3-202ENST00000421230 IDI1Q13907 227 aa25.33■■□□□ 1.65
PPFIA3-202ENST00000421230 PRAG1Q86YV5 1406 aa25.3■■□□□ 1.64
PPFIA3-202ENST00000421230 ADGRB3O60242 1522 aa25.3■■□□□ 1.64
PPFIA3-202ENST00000421230 NEURL4Q96JN8 1562 aa25.3■■□□□ 1.64
PPFIA3-202ENST00000421230 SLC52A1Q9NWF4 448 aa25.29■■□□□ 1.64
PPFIA3-202ENST00000421230 SPATA31D1Q6ZQQ2 1576 aa25.28■■□□□ 1.64
PPFIA3-202ENST00000421230 FER1L4A9Z1Z3 1794 aa25.27■■□□□ 1.64
PPFIA3-202ENST00000421230 DDX10Q13206 875 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-202ENST00000421230 CEBPAP49715 358 aaPredicted RBP25.25■■□□□ 1.63
PPFIA3-202ENST00000421230 RALGAPBQ86X10 1494 aa25.25■■□□□ 1.63
PPFIA3-202ENST00000421230 FKBP8Q14318 412 aa25.24■■□□□ 1.63
PPFIA3-202ENST00000421230 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
PPFIA3-202ENST00000421230 HSPA5P11021 654 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-202ENST00000421230 TRPM1Q7Z4N2 1603 aa25.22■■□□□ 1.63
PPFIA3-202ENST00000421230 IFT172Q9UG01 1749 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms