RNA–Protein interactions for RNA: ENST00000421212.1

LINC01249-202, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 3

Gene LINC01249, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-202ENST00000421212 HRO43593 1189 aa7.11□□□□□ -1.27
LINC01249-202ENST00000421212 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
LINC01249-202ENST00000421212 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
LINC01249-202ENST00000421212 DIP2BQ9P265 1576 aa7.11□□□□□ -1.27
LINC01249-202ENST00000421212 BIVM-ERCC5R4GMW8 1640 aa7.1□□□□□ -1.27
LINC01249-202ENST00000421212 PTPN5P54829 565 aa7.1□□□□□ -1.27
LINC01249-202ENST00000421212 EFCAB3Q8N7B9 438 aa7.1□□□□□ -1.27
LINC01249-202ENST00000421212 LAPTM4AQ15012 233 aa7.09□□□□□ -1.27
LINC01249-202ENST00000421212 ABCC10Q5T3U5 1492 aa7.09□□□□□ -1.27
LINC01249-202ENST00000421212 KDM6BO15054 1643 aa7.07□□□□□ -1.28
LINC01249-202ENST00000421212 MAPKBP1O60336 1514 aa7.06□□□□□ -1.28
LINC01249-202ENST00000421212 ADCY10Q96PN6 1610 aa7.06□□□□□ -1.28
LINC01249-202ENST00000421212 FAM69CQ0P6D2 419 aa7.06□□□□□ -1.28
LINC01249-202ENST00000421212 PRG4Q92954 1404 aaPredicted RBP7.06□□□□□ -1.28
LINC01249-202ENST00000421212 TSPOAP1O95153 1857 aa7.05□□□□□ -1.28
LINC01249-202ENST00000421212 KIF27Q86VH2 1401 aa7.05□□□□□ -1.28
LINC01249-202ENST00000421212 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
LINC01249-202ENST00000421212 KCNH8Q96L42 1107 aa7.04□□□□□ -1.28
LINC01249-202ENST00000421212 ERICH3Q5RHP9 1530 aa7.04□□□□□ -1.28
LINC01249-202ENST00000421212 RUSC2Q8N2Y8 1516 aa7.04□□□□□ -1.28
LINC01249-202ENST00000421212 SOX12O15370 315 aa7.03□□□□□ -1.28
LINC01249-202ENST00000421212 TRAF7Q6Q0C0 670 aa7.03□□□□□ -1.28
LINC01249-202ENST00000421212 FBXO3Q9UK99 471 aa7.03□□□□□ -1.28
LINC01249-202ENST00000421212 ADGRL1O94910 1474 aa7.03□□□□□ -1.28
LINC01249-202ENST00000421212 HECW2Q9P2P5 1572 aa7.03□□□□□ -1.28
LINC01249-202ENST00000421212 PCDHGA4Q9Y5G9 962 aa7.02□□□□□ -1.29
LINC01249-202ENST00000421212 PPRC1Q5VV67 1664 aaKnown RBP7.02□□□□□ -1.29
LINC01249-202ENST00000421212 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
LINC01249-202ENST00000421212 SLC34A2O95436 690 aa7□□□□□ -1.29
LINC01249-202ENST00000421212 COL17A1Q9UMD9 1497 aaPredicted RBP6.99□□□□□ -1.29
LINC01249-202ENST00000421212 PSEN2P49810 448 aa6.99□□□□□ -1.29
LINC01249-202ENST00000421212 JPH4Q96JJ6 628 aa6.99□□□□□ -1.29
LINC01249-202ENST00000421212 EHMT2Q96KQ7 1210 aa6.99□□□□□ -1.29
LINC01249-202ENST00000421212 CUL7Q14999 1698 aa6.97□□□□□ -1.29
LINC01249-202ENST00000421212 THSD4Q6ZMP0 1018 aa6.97□□□□□ -1.29
LINC01249-202ENST00000421212 IGF1RP08069 1367 aa6.96□□□□□ -1.29
LINC01249-202ENST00000421212 CARMIL1Q5VZK9 1371 aa6.96□□□□□ -1.29
LINC01249-202ENST00000421212 GOLGA8CPA6NN73 597 aa6.96□□□□□ -1.3
LINC01249-202ENST00000421212 CIZ1Q9ULV3 898 aaPredicted RBP6.96□□□□□ -1.3
LINC01249-202ENST00000421212 PPP4R3BQ5MIZ7 849 aa6.95□□□□□ -1.3
LINC01249-202ENST00000421212 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
LINC01249-202ENST00000421212 EEA1Q15075 1411 aa6.93□□□□□ -1.3
LINC01249-202ENST00000421212 GFRA3O60609 400 aa6.93□□□□□ -1.3
LINC01249-202ENST00000421212 GLI2P10070 1586 aa6.93□□□□□ -1.3
LINC01249-202ENST00000421212 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
LINC01249-202ENST00000421212 RAPGEF2Q9Y4G8 1499 aa6.92□□□□□ -1.3
LINC01249-202ENST00000421212 ABCC2Q92887 1545 aa6.92□□□□□ -1.3
LINC01249-202ENST00000421212 KIAA0586Q9BVV6 1533 aa6.92□□□□□ -1.3
LINC01249-202ENST00000421212 ZNF787Q6DD87 383 aa6.92□□□□□ -1.3
LINC01249-202ENST00000421212 PHF8Q9UPP1 1060 aa6.92□□□□□ -1.3
LINC01249-202ENST00000421212 MAP3K4Q9Y6R4 1608 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 C2orf72A6NCS6 295 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 LCE2BO14633 110 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 KIF3CO14782 793 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 WNT2BQ93097 391 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 VPS9D1Q9Y2B5 631 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 CARMIL2Q6F5E8 1435 aa6.91□□□□□ -1.3
LINC01249-202ENST00000421212 FAM9AQ8IZU1 332 aaPredicted RBP6.9□□□□□ -1.3
LINC01249-202ENST00000421212 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
LINC01249-202ENST00000421212 PTPRGP23470 1445 aa6.89□□□□□ -1.31
LINC01249-202ENST00000421212 EPRSP07814 1512 aaKnown RBP6.89□□□□□ -1.31
LINC01249-202ENST00000421212 PLB1Q6P1J6 1458 aa6.88□□□□□ -1.31
LINC01249-202ENST00000421212 VASPP50552 380 aaPredicted RBP6.88□□□□□ -1.31
LINC01249-202ENST00000421212 NLRP6P59044 892 aa6.88□□□□□ -1.31
LINC01249-202ENST00000421212 FBXO41Q8TF61 875 aa6.88□□□□□ -1.31
LINC01249-202ENST00000421212 IQGAP2Q13576 1575 aa6.87□□□□□ -1.31
LINC01249-202ENST00000421212 TTBK1Q5TCY1 1321 aaPredicted RBP6.87□□□□□ -1.31
LINC01249-202ENST00000421212 MRPL50Q8N5N7 158 aaKnown RBP6.87□□□□□ -1.31
LINC01249-202ENST00000421212 ZNF775Q96BV0 537 aaPredicted RBP6.87□□□□□ -1.31
LINC01249-202ENST00000421212 UHRF1BP1LA0JNW5 1464 aa6.86□□□□□ -1.31
LINC01249-202ENST00000421212 TMC2Q8TDI7 906 aa6.86□□□□□ -1.31
LINC01249-202ENST00000421212 KIF21BO75037 1637 aa6.86□□□□□ -1.31
LINC01249-202ENST00000421212 KDM5BQ9UGL1 1544 aa6.86□□□□□ -1.31
LINC01249-202ENST00000421212 GOLGA3Q08378 1498 aa6.85□□□□□ -1.31
LINC01249-202ENST00000421212 PRXQ9BXM0 1461 aa6.85□□□□□ -1.31
LINC01249-202ENST00000421212 NRG2O14511 850 aaPredicted RBP6.85□□□□□ -1.31
LINC01249-202ENST00000421212 SLC4A5Q9BY07 1137 aa6.85□□□□□ -1.31
LINC01249-202ENST00000421212 ZCCHC11Q5TAX3 1644 aaKnown RBP6.85□□□□□ -1.31
LINC01249-202ENST00000421212 DISP1Q96F81 1524 aa6.85□□□□□ -1.31
LINC01249-202ENST00000421212 TNIKQ9UKE5 1360 aa6.84□□□□□ -1.31
LINC01249-202ENST00000421212 SPOCK2Q92563 424 aa6.84□□□□□ -1.31
LINC01249-202ENST00000421212 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
LINC01249-202ENST00000421212 UACAQ9BZF9 1416 aa6.84□□□□□ -1.32
LINC01249-202ENST00000421212 FKBP8Q14318 412 aa6.83□□□□□ -1.32
LINC01249-202ENST00000421212 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
LINC01249-202ENST00000421212 UGGT2Q9NYU1 1516 aa6.81□□□□□ -1.32
LINC01249-202ENST00000421212 LMTK3Q96Q04 1460 aa6.81□□□□□ -1.32
LINC01249-202ENST00000421212 WDR7Q9Y4E6 1490 aa6.81□□□□□ -1.32
LINC01249-202ENST00000421212 BHMG1C9JSJ3 638 aaPredicted RBP6.81□□□□□ -1.32
LINC01249-202ENST00000421212 KCNC4Q03721 635 aa6.81□□□□□ -1.32
LINC01249-202ENST00000421212 ADAMTSL3P82987 1691 aa6.81□□□□□ -1.32
LINC01249-202ENST00000421212 PTPRMP28827 1452 aa6.8□□□□□ -1.32
LINC01249-202ENST00000421212 NYAP1Q6ZVC0 841 aa6.8□□□□□ -1.32
LINC01249-202ENST00000421212 PTCD2Q8WV60 388 aaKnown RBP6.8□□□□□ -1.32
LINC01249-202ENST00000421212 MAGI3Q5TCQ9 1506 aa6.8□□□□□ -1.32
LINC01249-202ENST00000421212 PCF11O94913 1555 aaKnown RBP6.79□□□□□ -1.32
LINC01249-202ENST00000421212 TBC1D12O60347 775 aa6.79□□□□□ -1.32
LINC01249-202ENST00000421212 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
LINC01249-202ENST00000421212 ILDR2Q71H61 639 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms