RNA–Protein interactions for RNA: ENST00000420790.1

PGAM1P3-201, Transcript of phosphoglycerate mutase 1 pseudogene 3, humanhuman

BASIC

Gene PGAM1P3, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P3-201ENST00000420790 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
PGAM1P3-201ENST00000420790 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
PGAM1P3-201ENST00000420790 PTPN23Q9H3S7 1636 aa11.71□□□□□ -0.53
PGAM1P3-201ENST00000420790 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
PGAM1P3-201ENST00000420790 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
PGAM1P3-201ENST00000420790 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
PGAM1P3-201ENST00000420790 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.54
PGAM1P3-201ENST00000420790 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
PGAM1P3-201ENST00000420790 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
PGAM1P3-201ENST00000420790 DNMT1P26358 1616 aaKnown RBP11.7□□□□□ -0.54
PGAM1P3-201ENST00000420790 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
PGAM1P3-201ENST00000420790 TSPY4P0CV99 314 aa11.68□□□□□ -0.54
PGAM1P3-201ENST00000420790 TSPY10P0CW01 314 aa11.68□□□□□ -0.54
PGAM1P3-201ENST00000420790 FAM50AQ14320 339 aaKnown RBP11.68□□□□□ -0.54
PGAM1P3-201ENST00000420790 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
PGAM1P3-201ENST00000420790 SOCS7O14512 581 aa11.67□□□□□ -0.54
PGAM1P3-201ENST00000420790 GGT6Q6P531 493 aa11.67□□□□□ -0.54
PGAM1P3-201ENST00000420790 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
PGAM1P3-201ENST00000420790 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
PGAM1P3-201ENST00000420790 DAPK1P53355 1430 aa11.65□□□□□ -0.54
PGAM1P3-201ENST00000420790 ABCC5O15440 1437 aa11.64□□□□□ -0.55
PGAM1P3-201ENST00000420790 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
PGAM1P3-201ENST00000420790 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
PGAM1P3-201ENST00000420790 SHANK2Q9UPX8 1470 aa11.63□□□□□ -0.55
PGAM1P3-201ENST00000420790 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
PGAM1P3-201ENST00000420790 CFAP65Q6ZU64 1925 aaKnown RBP11.63□□□□□ -0.55
PGAM1P3-201ENST00000420790 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
PGAM1P3-201ENST00000420790 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
PGAM1P3-201ENST00000420790 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
PGAM1P3-201ENST00000420790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
PGAM1P3-201ENST00000420790 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
PGAM1P3-201ENST00000420790 CEP152O94986 1710 aa11.61□□□□□ -0.55
PGAM1P3-201ENST00000420790 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
PGAM1P3-201ENST00000420790 CROCC2H7BZ55 1655 aa11.61□□□□□ -0.55
PGAM1P3-201ENST00000420790 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
PGAM1P3-201ENST00000420790 VWDEQ8N2E2 1590 aa11.6□□□□□ -0.55
PGAM1P3-201ENST00000420790 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
PGAM1P3-201ENST00000420790 PZPP20742 1482 aa11.59□□□□□ -0.55
PGAM1P3-201ENST00000420790 PKD2Q13563 968 aa11.59□□□□□ -0.55
PGAM1P3-201ENST00000420790 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 TNRQ92752 1358 aa11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 ITGAEP38570 1179 aa11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 CHIC2Q9UKJ5 165 aa11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
PGAM1P3-201ENST00000420790 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
PGAM1P3-201ENST00000420790 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
PGAM1P3-201ENST00000420790 KIF15Q9NS87 1388 aa11.57□□□□□ -0.56
PGAM1P3-201ENST00000420790 KIF3BO15066 747 aa11.57□□□□□ -0.56
PGAM1P3-201ENST00000420790 ADGRL2O95490 1459 aa11.57□□□□□ -0.56
PGAM1P3-201ENST00000420790 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
PGAM1P3-201ENST00000420790 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
PGAM1P3-201ENST00000420790 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
PGAM1P3-201ENST00000420790 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 CPS1P31327 1500 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 UGGT1Q9NYU2 1555 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 HRCP23327 699 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 HSPA1LP34931 641 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 UBR1Q8IWV7 1749 aa11.55□□□□□ -0.56
PGAM1P3-201ENST00000420790 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
PGAM1P3-201ENST00000420790 ABCC3O15438 1527 aa11.54□□□□□ -0.56
PGAM1P3-201ENST00000420790 ROCK1Q13464 1354 aa11.54□□□□□ -0.56
PGAM1P3-201ENST00000420790 EIF2AK4Q9P2K8 1649 aaKnown RBP11.53□□□□□ -0.56
PGAM1P3-201ENST00000420790 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
PGAM1P3-201ENST00000420790 NLRP1Q9C000 1473 aa11.51□□□□□ -0.57
PGAM1P3-201ENST00000420790 ZEB1P37275 1124 aaPredicted RBP11.51□□□□□ -0.57
PGAM1P3-201ENST00000420790 SENP3Q9H4L4 574 aaPredicted RBP11.51□□□□□ -0.57
PGAM1P3-201ENST00000420790 WASHC2CQ9Y4E1 1318 aa11.51□□□□□ -0.57
PGAM1P3-201ENST00000420790 MED14O60244 1454 aa11.51□□□□□ -0.57
PGAM1P3-201ENST00000420790 SYNMO15061 1565 aa11.5□□□□□ -0.57
PGAM1P3-201ENST00000420790 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
PGAM1P3-201ENST00000420790 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
PGAM1P3-201ENST00000420790 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
PGAM1P3-201ENST00000420790 LRRC7Q96NW7 1537 aa11.48□□□□□ -0.57
PGAM1P3-201ENST00000420790 PIK3C2BO00750 1634 aa11.47□□□□□ -0.57
PGAM1P3-201ENST00000420790 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
PGAM1P3-201ENST00000420790 KANK1Q14678 1352 aa11.46□□□□□ -0.57
PGAM1P3-201ENST00000420790 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
PGAM1P3-201ENST00000420790 PRDM15P57071 1507 aaPredicted RBP11.45□□□□□ -0.58
PGAM1P3-201ENST00000420790 TOM1O60784 492 aa11.45□□□□□ -0.58
PGAM1P3-201ENST00000420790 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
PGAM1P3-201ENST00000420790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.58
PGAM1P3-201ENST00000420790 HFM1A2PYH4 1435 aa11.44□□□□□ -0.58
PGAM1P3-201ENST00000420790 NAIPQ13075 1403 aa11.44□□□□□ -0.58
PGAM1P3-201ENST00000420790 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
PGAM1P3-201ENST00000420790 MYO5BQ9ULV0 1848 aa11.43□□□□□ -0.58
PGAM1P3-201ENST00000420790 SCAF11Q99590 1463 aaKnown RBP11.43□□□□□ -0.58
PGAM1P3-201ENST00000420790 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
PGAM1P3-201ENST00000420790 UNC13BO14795 1591 aa11.41□□□□□ -0.58
PGAM1P3-201ENST00000420790 SLIT1O75093 1534 aa11.41□□□□□ -0.58
PGAM1P3-201ENST00000420790 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
PGAM1P3-201ENST00000420790 SETD5Q9C0A6 1442 aa11.41□□□□□ -0.58
PGAM1P3-201ENST00000420790 LTKP29376 864 aa11.39□□□□□ -0.59
PGAM1P3-201ENST00000420790 LMTK2Q8IWU2 1503 aa11.39□□□□□ -0.59
PGAM1P3-201ENST00000420790 NUP155O75694 1391 aa11.39□□□□□ -0.59
PGAM1P3-201ENST00000420790 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms