RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 KIAA1107Q9UPP5 1409 aa15.19■□□□□ 0.02
TRIM39-206ENST00000420746 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
TRIM39-206ENST00000420746 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
TRIM39-206ENST00000420746 PZPP20742 1482 aa15.19■□□□□ 0.02
TRIM39-206ENST00000420746 IQGAP1P46940 1657 aa15.19■□□□□ 0.02
TRIM39-206ENST00000420746 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
TRIM39-206ENST00000420746 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
TRIM39-206ENST00000420746 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
TRIM39-206ENST00000420746 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
TRIM39-206ENST00000420746 PLEKHH2Q8IVE3 1493 aa15.16■□□□□ 0.02
TRIM39-206ENST00000420746 SETD1AO15047 1707 aaKnown RBP15.15■□□□□ 0.02
TRIM39-206ENST00000420746 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
TRIM39-206ENST00000420746 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
TRIM39-206ENST00000420746 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
TRIM39-206ENST00000420746 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
TRIM39-206ENST00000420746 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRIM39-206ENST00000420746 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
TRIM39-206ENST00000420746 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
TRIM39-206ENST00000420746 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
TRIM39-206ENST00000420746 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRIM39-206ENST00000420746 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-206ENST00000420746 ZNF777Q9ULD5 760 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-206ENST00000420746 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
TRIM39-206ENST00000420746 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
TRIM39-206ENST00000420746 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
TRIM39-206ENST00000420746 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
TRIM39-206ENST00000420746 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
TRIM39-206ENST00000420746 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
TRIM39-206ENST00000420746 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
TRIM39-206ENST00000420746 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
TRIM39-206ENST00000420746 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
TRIM39-206ENST00000420746 SCAF11Q99590 1463 aaKnown RBP15.02■□□□□ -0
TRIM39-206ENST00000420746 JCADQ9P266 1359 aa15.02■□□□□ -0
TRIM39-206ENST00000420746 ROBO1Q9Y6N7 1651 aa15.02□□□□□ -0.01
TRIM39-206ENST00000420746 ZNF772Q68DY9 489 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-206ENST00000420746 KIF3BO15066 747 aa15□□□□□ -0.01
TRIM39-206ENST00000420746 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
TRIM39-206ENST00000420746 MBD5Q9P267 1494 aa15□□□□□ -0.01
TRIM39-206ENST00000420746 ARHGAP23Q9P227 1491 aa14.98□□□□□ -0.01
TRIM39-206ENST00000420746 SLIT1O75093 1534 aa14.97□□□□□ -0.01
TRIM39-206ENST00000420746 UBTFP17480 764 aaKnown RBP14.97□□□□□ -0.01
TRIM39-206ENST00000420746 TMEM94Q12767 1356 aa14.97□□□□□ -0.01
TRIM39-206ENST00000420746 CCNB3Q8WWL7 1395 aa14.97□□□□□ -0.01
TRIM39-206ENST00000420746 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.01
TRIM39-206ENST00000420746 MAP3K1Q13233 1512 aa14.96□□□□□ -0.02
TRIM39-206ENST00000420746 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
TRIM39-206ENST00000420746 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
TRIM39-206ENST00000420746 TRIM52Q96A61 297 aa14.95□□□□□ -0.02
TRIM39-206ENST00000420746 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
TRIM39-206ENST00000420746 UBR1Q8IWV7 1749 aa14.94□□□□□ -0.02
TRIM39-206ENST00000420746 LTKP29376 864 aa14.93□□□□□ -0.02
TRIM39-206ENST00000420746 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
TRIM39-206ENST00000420746 LRP6O75581 1613 aa14.92□□□□□ -0.02
TRIM39-206ENST00000420746 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
TRIM39-206ENST00000420746 RXRBP28702 533 aa14.92□□□□□ -0.02
TRIM39-206ENST00000420746 TXNDC2Q86VQ3 553 aa14.91□□□□□ -0.02
TRIM39-206ENST00000420746 COL16A1Q07092 1604 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-206ENST00000420746 ABCC3O15438 1527 aa14.91□□□□□ -0.02
TRIM39-206ENST00000420746 PRDM15P57071 1507 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-206ENST00000420746 NKTRP30414 1462 aaKnown RBP14.9□□□□□ -0.02
TRIM39-206ENST00000420746 KCNA6P17658 529 aa14.9□□□□□ -0.02
TRIM39-206ENST00000420746 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
TRIM39-206ENST00000420746 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
TRIM39-206ENST00000420746 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
TRIM39-206ENST00000420746 MSH6P52701 1360 aa14.88□□□□□ -0.03
TRIM39-206ENST00000420746 FOXD1Q16676 465 aa14.88□□□□□ -0.03
TRIM39-206ENST00000420746 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
TRIM39-206ENST00000420746 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
TRIM39-206ENST00000420746 SLAIN2Q9P270 581 aa14.88□□□□□ -0.03
TRIM39-206ENST00000420746 TIAM1Q13009 1591 aa14.88□□□□□ -0.03
TRIM39-206ENST00000420746 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
TRIM39-206ENST00000420746 PROSER2Q86WR7 435 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-206ENST00000420746 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
TRIM39-206ENST00000420746 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
TRIM39-206ENST00000420746 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
TRIM39-206ENST00000420746 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
TRIM39-206ENST00000420746 AHDC1Q5TGY3 1603 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-206ENST00000420746 TET3O43151 1660 aa14.82□□□□□ -0.04
TRIM39-206ENST00000420746 ARHGAP31Q2M1Z3 1444 aa14.82□□□□□ -0.04
TRIM39-206ENST00000420746 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
TRIM39-206ENST00000420746 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
TRIM39-206ENST00000420746 RGS12O14924 1447 aa14.8□□□□□ -0.04
TRIM39-206ENST00000420746 NCOA3Q9Y6Q9 1424 aa14.8□□□□□ -0.04
TRIM39-206ENST00000420746 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
TRIM39-206ENST00000420746 MROH1Q8NDA8 1641 aa14.78□□□□□ -0.04
TRIM39-206ENST00000420746 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
TRIM39-206ENST00000420746 RBM33Q96EV2 1170 aaKnown RBP14.78□□□□□ -0.04
TRIM39-206ENST00000420746 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.04
TRIM39-206ENST00000420746 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.05
TRIM39-206ENST00000420746 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
TRIM39-206ENST00000420746 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 ATAD2Q6PL18 1390 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 AFF2P51816 1311 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 TSPY4P0CV99 314 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 TSPY10P0CW01 314 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 EFCAB6Q5THR3 1501 aa14.76□□□□□ -0.05
TRIM39-206ENST00000420746 PIK3C2BO00750 1634 aa14.75□□□□□ -0.05
TRIM39-206ENST00000420746 SLC26A8Q96RN1 970 aa14.75□□□□□ -0.05
TRIM39-206ENST00000420746 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
TRIM39-206ENST00000420746 SETBP1Q9Y6X0 1596 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms