RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
VAT1-202ENST00000420567 NCOA1Q15788 1441 aa24.31■■□□□ 1.48
VAT1-202ENST00000420567 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
VAT1-202ENST00000420567 PPP6R1Q9UPN7 881 aa24.31■■□□□ 1.48
VAT1-202ENST00000420567 MROH2AA6NES4 1674 aa24.3■■□□□ 1.48
VAT1-202ENST00000420567 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
VAT1-202ENST00000420567 RNF17Q9BXT8 1623 aaKnown RBP24.29■■□□□ 1.48
VAT1-202ENST00000420567 ITGAEP38570 1179 aa24.29■■□□□ 1.48
VAT1-202ENST00000420567 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
VAT1-202ENST00000420567 WASHC2CQ9Y4E1 1318 aa24.27■■□□□ 1.48
VAT1-202ENST00000420567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.27■■□□□ 1.48
VAT1-202ENST00000420567 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
VAT1-202ENST00000420567 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
VAT1-202ENST00000420567 HSPA2P54652 639 aa24.23■■□□□ 1.47
VAT1-202ENST00000420567 PREX1Q8TCU6 1659 aa24.22■■□□□ 1.47
VAT1-202ENST00000420567 ABCC3O15438 1527 aa24.22■■□□□ 1.47
VAT1-202ENST00000420567 UHRF1BP1Q6BDS2 1440 aa24.22■■□□□ 1.47
VAT1-202ENST00000420567 NPATQ14207 1427 aa24.21■■□□□ 1.47
VAT1-202ENST00000420567 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.46
VAT1-202ENST00000420567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.19■■□□□ 1.46
VAT1-202ENST00000420567 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
VAT1-202ENST00000420567 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
VAT1-202ENST00000420567 PZPP20742 1482 aa24.17■■□□□ 1.46
VAT1-202ENST00000420567 ZC3H13Q5T200 1668 aaKnown RBP24.17■■□□□ 1.46
VAT1-202ENST00000420567 DEPDC5O75140 1603 aa24.16■■□□□ 1.46
VAT1-202ENST00000420567 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
VAT1-202ENST00000420567 CEP152O94986 1710 aa24.13■■□□□ 1.45
VAT1-202ENST00000420567 MYO3AQ8NEV4 1616 aa24.12■■□□□ 1.45
VAT1-202ENST00000420567 KANK1Q14678 1352 aa24.12■■□□□ 1.45
VAT1-202ENST00000420567 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
VAT1-202ENST00000420567 TNRQ92752 1358 aa24.1■■□□□ 1.45
VAT1-202ENST00000420567 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
VAT1-202ENST00000420567 ERVK-7P63135 1459 aa24.06■■□□□ 1.44
VAT1-202ENST00000420567 CEP170BQ9Y4F5 1589 aaPredicted RBP24.05■■□□□ 1.44
VAT1-202ENST00000420567 LMTK2Q8IWU2 1503 aa24.05■■□□□ 1.44
VAT1-202ENST00000420567 UNC13BO14795 1591 aa24.03■■□□□ 1.44
VAT1-202ENST00000420567 SPATA31D1Q6ZQQ2 1576 aa24.03■■□□□ 1.44
VAT1-202ENST00000420567 SETD1BQ9UPS6 1966 aaKnown RBP24.03■■□□□ 1.44
VAT1-202ENST00000420567 ZNF142P52746 1687 aaPredicted RBP24.03■■□□□ 1.44
VAT1-202ENST00000420567 ARHGAP31Q2M1Z3 1444 aa24.02■■□□□ 1.44
VAT1-202ENST00000420567 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
VAT1-202ENST00000420567 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
VAT1-202ENST00000420567 NAIPQ13075 1403 aa23.99■■□□□ 1.43
VAT1-202ENST00000420567 NLRP1Q9C000 1473 aa23.97■■□□□ 1.43
VAT1-202ENST00000420567 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
VAT1-202ENST00000420567 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
VAT1-202ENST00000420567 NUP155O75694 1391 aa23.94■■□□□ 1.42
VAT1-202ENST00000420567 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
VAT1-202ENST00000420567 TET3O43151 1660 aa23.92■■□□□ 1.42
VAT1-202ENST00000420567 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
VAT1-202ENST00000420567 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
VAT1-202ENST00000420567 PLA2R1Q13018 1463 aa23.91■■□□□ 1.42
VAT1-202ENST00000420567 NCKAP5LQ9HCH0 1330 aa23.9■■□□□ 1.42
VAT1-202ENST00000420567 RPRD2Q5VT52 1461 aaKnown RBP23.88■■□□□ 1.41
VAT1-202ENST00000420567 NOS1P29475 1434 aa23.88■■□□□ 1.41
VAT1-202ENST00000420567 SYNMO15061 1565 aa23.87■■□□□ 1.41
VAT1-202ENST00000420567 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
VAT1-202ENST00000420567 THEMISQ8N1K5 641 aaPredicted RBP23.84■■□□□ 1.41
VAT1-202ENST00000420567 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
VAT1-202ENST00000420567 PTPRTO14522 1441 aa23.84■■□□□ 1.41
VAT1-202ENST00000420567 E9PCH4 1651 aa23.83■■□□□ 1.41
VAT1-202ENST00000420567 PKD2Q13563 968 aa23.83■■□□□ 1.41
VAT1-202ENST00000420567 PIK3C2BO00750 1634 aa23.82■■□□□ 1.4
VAT1-202ENST00000420567 IDI1Q13907 227 aa23.81■■□□□ 1.4
VAT1-202ENST00000420567 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
VAT1-202ENST00000420567 UBR1Q8IWV7 1749 aa23.8■■□□□ 1.4
VAT1-202ENST00000420567 STAG3Q9UJ98 1225 aa23.78■■□□□ 1.4
VAT1-202ENST00000420567 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
VAT1-202ENST00000420567 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
VAT1-202ENST00000420567 SLC52A1Q9NWF4 448 aa23.76■■□□□ 1.39
VAT1-202ENST00000420567 ADGRB3O60242 1522 aa23.75■■□□□ 1.39
VAT1-202ENST00000420567 POLR1AO95602 1720 aaPredicted RBP23.75■■□□□ 1.39
VAT1-202ENST00000420567 SETD5Q9C0A6 1442 aa23.73■■□□□ 1.39
VAT1-202ENST00000420567 NPHP4O75161 1426 aaPredicted RBP23.72■■□□□ 1.39
VAT1-202ENST00000420567 ARHGAP23Q9P227 1491 aa23.72■■□□□ 1.39
VAT1-202ENST00000420567 SLIT1O75093 1534 aa23.72■■□□□ 1.39
VAT1-202ENST00000420567 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
VAT1-202ENST00000420567 SCAF11Q99590 1463 aaKnown RBP23.7■■□□□ 1.38
VAT1-202ENST00000420567 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.38
VAT1-202ENST00000420567 KDM5AP29375 1690 aaKnown RBP23.69■■□□□ 1.38
VAT1-202ENST00000420567 MED14O60244 1454 aa23.68■■□□□ 1.38
VAT1-202ENST00000420567 CHGAP10645 457 aaKnown RBP23.68■■□□□ 1.38
VAT1-202ENST00000420567 LTKP29376 864 aa23.68■■□□□ 1.38
VAT1-202ENST00000420567 TXNDC2Q86VQ3 553 aa23.68■■□□□ 1.38
VAT1-202ENST00000420567 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
VAT1-202ENST00000420567 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
VAT1-202ENST00000420567 SPHKAPQ2M3C7 1700 aa23.66■■□□□ 1.38
VAT1-202ENST00000420567 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
VAT1-202ENST00000420567 IQGAP1P46940 1657 aa23.64■■□□□ 1.38
VAT1-202ENST00000420567 TMEM131LA2VDJ0 1609 aa23.64■■□□□ 1.38
VAT1-202ENST00000420567 TRPM2O94759 1503 aa23.64■■□□□ 1.37
VAT1-202ENST00000420567 LTBP4Q8N2S1 1624 aa23.63■■□□□ 1.37
VAT1-202ENST00000420567 CERKQ8TCT0 537 aa23.63■■□□□ 1.37
VAT1-202ENST00000420567 FOXD1Q16676 465 aa23.62■■□□□ 1.37
VAT1-202ENST00000420567 CLTCL1P53675 1640 aa23.6■■□□□ 1.37
VAT1-202ENST00000420567 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
VAT1-202ENST00000420567 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
VAT1-202ENST00000420567 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
VAT1-202ENST00000420567 MYO5BQ9ULV0 1848 aa23.57■■□□□ 1.36
VAT1-202ENST00000420567 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms