RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 CROCC2H7BZ55 1655 aa15.05■□□□□ -0
PHF3-203ENST00000420043 FER1L4A9Z1Z3 1794 aa15.05■□□□□ -0
PHF3-203ENST00000420043 ADGBQ8N7X0 1667 aa15.04■□□□□ -0
PHF3-203ENST00000420043 ADGRL2O95490 1459 aa15.04■□□□□ -0
PHF3-203ENST00000420043 CCDC141Q6ZP82 1450 aa15.04■□□□□ -0
PHF3-203ENST00000420043 DIP2CQ9Y2E4 1556 aa15.02■□□□□ -0
PHF3-203ENST00000420043 ABCC1P33527 1531 aa15.02■□□□□ -0
PHF3-203ENST00000420043 MLH3Q9UHC1 1453 aa15.02■□□□□ -0
PHF3-203ENST00000420043 NCOA1Q15788 1441 aa15.02■□□□□ -0
PHF3-203ENST00000420043 KIAA1107Q9UPP5 1409 aa15.02■□□□□ -0
PHF3-203ENST00000420043 FBXO41Q8TF61 875 aa15.02■□□□□ -0
PHF3-203ENST00000420043 MBD5Q9P267 1494 aa15.01□□□□□ -0.01
PHF3-203ENST00000420043 SYCP2Q9BX26 1530 aa15.01□□□□□ -0.01
PHF3-203ENST00000420043 ABCA6Q8N139 1617 aa15□□□□□ -0.01
PHF3-203ENST00000420043 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
PHF3-203ENST00000420043 SPAG9O60271 1321 aaKnown RBP14.97□□□□□ -0.01
PHF3-203ENST00000420043 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
PHF3-203ENST00000420043 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.01
PHF3-203ENST00000420043 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
PHF3-203ENST00000420043 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.01
PHF3-203ENST00000420043 REREQ9P2R6 1566 aa14.94□□□□□ -0.02
PHF3-203ENST00000420043 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
PHF3-203ENST00000420043 MPHOSPH9Q99550 1183 aa14.94□□□□□ -0.02
PHF3-203ENST00000420043 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
PHF3-203ENST00000420043 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
PHF3-203ENST00000420043 AGLP35573 1532 aa14.92□□□□□ -0.02
PHF3-203ENST00000420043 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
PHF3-203ENST00000420043 TIMELESSQ9UNS1 1208 aa14.92□□□□□ -0.02
PHF3-203ENST00000420043 PREX1Q8TCU6 1659 aa14.91□□□□□ -0.02
PHF3-203ENST00000420043 CERKQ8TCT0 537 aa14.91□□□□□ -0.02
PHF3-203ENST00000420043 GGT6Q6P531 493 aa14.9□□□□□ -0.02
PHF3-203ENST00000420043 C3P01024 1663 aa14.9□□□□□ -0.02
PHF3-203ENST00000420043 TONSLQ96HA7 1378 aa14.88□□□□□ -0.03
PHF3-203ENST00000420043 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
PHF3-203ENST00000420043 PLXNC1O60486 1568 aa14.88□□□□□ -0.03
PHF3-203ENST00000420043 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
PHF3-203ENST00000420043 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
PHF3-203ENST00000420043 ZMYM3Q14202 1370 aa14.87□□□□□ -0.03
PHF3-203ENST00000420043 A2MP01023 1474 aa14.87□□□□□ -0.03
PHF3-203ENST00000420043 NUP155O75694 1391 aa14.86□□□□□ -0.03
PHF3-203ENST00000420043 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
PHF3-203ENST00000420043 CNTLNQ9NXG0 1405 aa14.86□□□□□ -0.03
PHF3-203ENST00000420043 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
PHF3-203ENST00000420043 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
PHF3-203ENST00000420043 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
PHF3-203ENST00000420043 PZPP20742 1482 aa14.84□□□□□ -0.03
PHF3-203ENST00000420043 INO80Q9ULG1 1556 aaPredicted RBP14.83□□□□□ -0.04
PHF3-203ENST00000420043 ERBINQ96RT1 1412 aa14.83□□□□□ -0.04
PHF3-203ENST00000420043 PKD2Q13563 968 aa14.82□□□□□ -0.04
PHF3-203ENST00000420043 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
PHF3-203ENST00000420043 ANKRD30BQ9BXX2 1392 aa14.81□□□□□ -0.04
PHF3-203ENST00000420043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
PHF3-203ENST00000420043 NCKAP5LQ9HCH0 1330 aa14.8□□□□□ -0.04
PHF3-203ENST00000420043 CLTCQ00610 1675 aaKnown RBP14.8□□□□□ -0.04
PHF3-203ENST00000420043 KIF3BO15066 747 aa14.79□□□□□ -0.04
PHF3-203ENST00000420043 NPATQ14207 1427 aa14.78□□□□□ -0.04
PHF3-203ENST00000420043 DHX29Q7Z478 1369 aaKnown RBP14.78□□□□□ -0.04
PHF3-203ENST00000420043 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
PHF3-203ENST00000420043 PTPRTO14522 1441 aa14.77□□□□□ -0.04
PHF3-203ENST00000420043 UNC13BO14795 1591 aa14.77□□□□□ -0.05
PHF3-203ENST00000420043 FBXO31Q5XUX0 539 aaPredicted RBP14.76□□□□□ -0.05
PHF3-203ENST00000420043 MROH2AA6NES4 1674 aa14.76□□□□□ -0.05
PHF3-203ENST00000420043 CAMSAP1Q5T5Y3 1602 aa14.76□□□□□ -0.05
PHF3-203ENST00000420043 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
PHF3-203ENST00000420043 RPRD2Q5VT52 1461 aaKnown RBP14.74□□□□□ -0.05
PHF3-203ENST00000420043 KANK1Q14678 1352 aa14.73□□□□□ -0.05
PHF3-203ENST00000420043 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
PHF3-203ENST00000420043 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
PHF3-203ENST00000420043 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
PHF3-203ENST00000420043 ZNF335Q9H4Z2 1342 aaPredicted RBP14.7□□□□□ -0.06
PHF3-203ENST00000420043 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
PHF3-203ENST00000420043 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
PHF3-203ENST00000420043 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
PHF3-203ENST00000420043 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
PHF3-203ENST00000420043 L3MBTL2Q969R5 705 aa14.69□□□□□ -0.06
PHF3-203ENST00000420043 EIF2AK4Q9P2K8 1649 aaKnown RBP14.68□□□□□ -0.06
PHF3-203ENST00000420043 TNRQ92752 1358 aa14.67□□□□□ -0.06
PHF3-203ENST00000420043 A2ML1A8K2U0 1454 aa14.65□□□□□ -0.06
PHF3-203ENST00000420043 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
PHF3-203ENST00000420043 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
PHF3-203ENST00000420043 PLA2R1Q13018 1463 aa14.64□□□□□ -0.07
PHF3-203ENST00000420043 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
PHF3-203ENST00000420043 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
PHF3-203ENST00000420043 PRDM15P57071 1507 aaPredicted RBP14.61□□□□□ -0.07
PHF3-203ENST00000420043 THEMISQ8N1K5 641 aaPredicted RBP14.6□□□□□ -0.07
PHF3-203ENST00000420043 TET3O43151 1660 aa14.59□□□□□ -0.07
PHF3-203ENST00000420043 ANKLE2Q86XL3 938 aa14.59□□□□□ -0.07
PHF3-203ENST00000420043 VWDEQ8N2E2 1590 aa14.59□□□□□ -0.07
PHF3-203ENST00000420043 DISP3Q9P2K9 1392 aa14.59□□□□□ -0.07
PHF3-203ENST00000420043 RNF17Q9BXT8 1623 aaKnown RBP14.58□□□□□ -0.08
PHF3-203ENST00000420043 ABCC3O15438 1527 aa14.57□□□□□ -0.08
PHF3-203ENST00000420043 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
PHF3-203ENST00000420043 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
PHF3-203ENST00000420043 MROH1Q8NDA8 1641 aa14.56□□□□□ -0.08
PHF3-203ENST00000420043 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
PHF3-203ENST00000420043 ILDR2Q71H61 639 aa14.56□□□□□ -0.08
PHF3-203ENST00000420043 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
PHF3-203ENST00000420043 EIF4G2P78344 907 aaKnown RBP eCLIP14.55□□□□□ -0.08
PHF3-203ENST00000420043 DCAF11Q8TEB1 546 aa14.55□□□□□ -0.08
PHF3-203ENST00000420043 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms