RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A2MP01023 1474 aa21.01■□□□□ 0.95
SHMT1P1-201ENST00000419974 PTPRMP28827 1452 aa21.01■□□□□ 0.95
SHMT1P1-201ENST00000419974 UNC13BO14795 1591 aa21.01■□□□□ 0.95
SHMT1P1-201ENST00000419974 REREQ9P2R6 1566 aa21.01■□□□□ 0.95
SHMT1P1-201ENST00000419974 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
SHMT1P1-201ENST00000419974 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
SHMT1P1-201ENST00000419974 PZPP20742 1482 aa20.97■□□□□ 0.95
SHMT1P1-201ENST00000419974 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
SHMT1P1-201ENST00000419974 ABCA6Q8N139 1617 aa20.97■□□□□ 0.95
SHMT1P1-201ENST00000419974 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
SHMT1P1-201ENST00000419974 NUP155O75694 1391 aa20.94■□□□□ 0.94
SHMT1P1-201ENST00000419974 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
SHMT1P1-201ENST00000419974 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
SHMT1P1-201ENST00000419974 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
SHMT1P1-201ENST00000419974 AGLP35573 1532 aa20.93■□□□□ 0.94
SHMT1P1-201ENST00000419974 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
SHMT1P1-201ENST00000419974 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
SHMT1P1-201ENST00000419974 IQGAP3Q86VI3 1631 aa20.91■□□□□ 0.94
SHMT1P1-201ENST00000419974 MYT1LQ9UL68 1186 aa20.91■□□□□ 0.94
SHMT1P1-201ENST00000419974 FAM135AQ9P2D6 1515 aa20.9■□□□□ 0.94
SHMT1P1-201ENST00000419974 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
SHMT1P1-201ENST00000419974 TIMELESSQ9UNS1 1208 aa20.89■□□□□ 0.93
SHMT1P1-201ENST00000419974 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
SHMT1P1-201ENST00000419974 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
SHMT1P1-201ENST00000419974 MROH1Q8NDA8 1641 aa20.87■□□□□ 0.93
SHMT1P1-201ENST00000419974 RIMS1Q86UR5 1692 aaKnown RBP20.87■□□□□ 0.93
SHMT1P1-201ENST00000419974 KIF3BO15066 747 aa20.86■□□□□ 0.93
SHMT1P1-201ENST00000419974 ANKRD30BQ9BXX2 1392 aa20.86■□□□□ 0.93
SHMT1P1-201ENST00000419974 KANK1Q14678 1352 aa20.85■□□□□ 0.93
SHMT1P1-201ENST00000419974 MLECQ14165 292 aa20.85■□□□□ 0.93
SHMT1P1-201ENST00000419974 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
SHMT1P1-201ENST00000419974 PKD2Q13563 968 aa20.8■□□□□ 0.92
SHMT1P1-201ENST00000419974 TET3O43151 1660 aa20.78■□□□□ 0.92
SHMT1P1-201ENST00000419974 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
SHMT1P1-201ENST00000419974 LMTK3Q96Q04 1460 aa20.78■□□□□ 0.92
SHMT1P1-201ENST00000419974 ARHGAP31Q2M1Z3 1444 aa20.76■□□□□ 0.91
SHMT1P1-201ENST00000419974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.91
SHMT1P1-201ENST00000419974 PTPRTO14522 1441 aa20.75■□□□□ 0.91
SHMT1P1-201ENST00000419974 ZC3H13Q5T200 1668 aaKnown RBP20.74■□□□□ 0.91
SHMT1P1-201ENST00000419974 ABCC3O15438 1527 aa20.73■□□□□ 0.91
SHMT1P1-201ENST00000419974 EFCAB6Q5THR3 1501 aa20.73■□□□□ 0.91
SHMT1P1-201ENST00000419974 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
SHMT1P1-201ENST00000419974 GGT6Q6P531 493 aa20.7■□□□□ 0.9
SHMT1P1-201ENST00000419974 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
SHMT1P1-201ENST00000419974 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
SHMT1P1-201ENST00000419974 CNTLNQ9NXG0 1405 aa20.7■□□□□ 0.9
SHMT1P1-201ENST00000419974 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
SHMT1P1-201ENST00000419974 SETD1BQ9UPS6 1966 aaKnown RBP20.69■□□□□ 0.9
SHMT1P1-201ENST00000419974 CEBPAP49715 358 aaPredicted RBP20.69■□□□□ 0.9
SHMT1P1-201ENST00000419974 FOXD1Q16676 465 aa20.68■□□□□ 0.9
SHMT1P1-201ENST00000419974 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
SHMT1P1-201ENST00000419974 E9PCH4 1651 aa20.68■□□□□ 0.9
SHMT1P1-201ENST00000419974 TRPM2O94759 1503 aa20.66■□□□□ 0.9
SHMT1P1-201ENST00000419974 NPATQ14207 1427 aa20.65■□□□□ 0.9
SHMT1P1-201ENST00000419974 NEURL4Q96JN8 1562 aa20.64■□□□□ 0.9
SHMT1P1-201ENST00000419974 PREX1Q8TCU6 1659 aa20.64■□□□□ 0.89
SHMT1P1-201ENST00000419974 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
SHMT1P1-201ENST00000419974 HSPA2P54652 639 aa20.62■□□□□ 0.89
SHMT1P1-201ENST00000419974 NOS1P29475 1434 aa20.62■□□□□ 0.89
SHMT1P1-201ENST00000419974 CAMSAP1Q5T5Y3 1602 aa20.62■□□□□ 0.89
SHMT1P1-201ENST00000419974 C3P01024 1663 aa20.62■□□□□ 0.89
SHMT1P1-201ENST00000419974 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
SHMT1P1-201ENST00000419974 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
SHMT1P1-201ENST00000419974 CEP152O94986 1710 aa20.6■□□□□ 0.89
SHMT1P1-201ENST00000419974 MROH2AA6NES4 1674 aa20.6■□□□□ 0.89
SHMT1P1-201ENST00000419974 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
SHMT1P1-201ENST00000419974 ZMYM3Q14202 1370 aa20.59■□□□□ 0.89
SHMT1P1-201ENST00000419974 PPP1R15AO75807 674 aaPredicted RBP20.59■□□□□ 0.89
SHMT1P1-201ENST00000419974 SPHKAPQ2M3C7 1700 aa20.59■□□□□ 0.89
SHMT1P1-201ENST00000419974 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
SHMT1P1-201ENST00000419974 ILDR1Q86SU0 546 aaPredicted RBP20.54■□□□□ 0.88
SHMT1P1-201ENST00000419974 SPATA31E1Q6ZUB1 1445 aa20.54■□□□□ 0.88
SHMT1P1-201ENST00000419974 L3MBTL2Q969R5 705 aa20.53■□□□□ 0.88
SHMT1P1-201ENST00000419974 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
SHMT1P1-201ENST00000419974 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
SHMT1P1-201ENST00000419974 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
SHMT1P1-201ENST00000419974 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
SHMT1P1-201ENST00000419974 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
SHMT1P1-201ENST00000419974 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
SHMT1P1-201ENST00000419974 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
SHMT1P1-201ENST00000419974 SYNMO15061 1565 aa20.47■□□□□ 0.87
SHMT1P1-201ENST00000419974 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
SHMT1P1-201ENST00000419974 FBXO41Q8TF61 875 aa20.44■□□□□ 0.86
SHMT1P1-201ENST00000419974 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
SHMT1P1-201ENST00000419974 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
SHMT1P1-201ENST00000419974 UGGT1Q9NYU2 1555 aa20.39■□□□□ 0.86
SHMT1P1-201ENST00000419974 IDI1Q13907 227 aa20.39■□□□□ 0.85
SHMT1P1-201ENST00000419974 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
SHMT1P1-201ENST00000419974 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
SHMT1P1-201ENST00000419974 KIF1BO60333 1816 aa20.38■□□□□ 0.85
SHMT1P1-201ENST00000419974 MYOM2P54296 1465 aa20.37■□□□□ 0.85
SHMT1P1-201ENST00000419974 KDM5AP29375 1690 aaKnown RBP20.36■□□□□ 0.85
SHMT1P1-201ENST00000419974 MYO3AQ8NEV4 1616 aa20.36■□□□□ 0.85
SHMT1P1-201ENST00000419974 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
SHMT1P1-201ENST00000419974 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
SHMT1P1-201ENST00000419974 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
SHMT1P1-201ENST00000419974 CERKQ8TCT0 537 aa20.35■□□□□ 0.85
SHMT1P1-201ENST00000419974 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
SHMT1P1-201ENST00000419974 NRXN1Q9ULB1 1477 aa20.35■□□□□ 0.85
SHMT1P1-201ENST00000419974 ZFYVE9O95405 1425 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms