RNA–Protein interactions for RNA: ENST00000419693.1

SNX8-202, Transcript of sorting nexin 8, humanhuman

TSL 3

Gene SNX8, Length 415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-202ENST00000419693 RRP7BPQ9NSQ0 103 aa25.52■■□□□ 1.68
SNX8-202ENST00000419693 SHANK2Q9UPX8 1470 aa25.51■■□□□ 1.67
SNX8-202ENST00000419693 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
SNX8-202ENST00000419693 DAPK1P53355 1430 aa25.5■■□□□ 1.67
SNX8-202ENST00000419693 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
SNX8-202ENST00000419693 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
SNX8-202ENST00000419693 DUOX2Q9NRD8 1548 aa25.5■■□□□ 1.67
SNX8-202ENST00000419693 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
SNX8-202ENST00000419693 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
SNX8-202ENST00000419693 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
SNX8-202ENST00000419693 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
SNX8-202ENST00000419693 CHIC2Q9UKJ5 165 aa25.48■■□□□ 1.67
SNX8-202ENST00000419693 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
SNX8-202ENST00000419693 PZPP20742 1482 aa25.47■■□□□ 1.67
SNX8-202ENST00000419693 PTPRTO14522 1441 aa25.47■■□□□ 1.67
SNX8-202ENST00000419693 TNRQ92752 1358 aa25.47■■□□□ 1.67
SNX8-202ENST00000419693 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
SNX8-202ENST00000419693 EIF2AK4Q9P2K8 1649 aaKnown RBP25.46■■□□□ 1.67
SNX8-202ENST00000419693 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
SNX8-202ENST00000419693 DNMT1P26358 1616 aaKnown RBP25.45■■□□□ 1.67
SNX8-202ENST00000419693 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
SNX8-202ENST00000419693 RNF17Q9BXT8 1623 aaKnown RBP25.45■■□□□ 1.66
SNX8-202ENST00000419693 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
SNX8-202ENST00000419693 NCKAP5LQ9HCH0 1330 aa25.43■■□□□ 1.66
SNX8-202ENST00000419693 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
SNX8-202ENST00000419693 A2ML1A8K2U0 1454 aa25.42■■□□□ 1.66
SNX8-202ENST00000419693 PKD2Q13563 968 aa25.42■■□□□ 1.66
SNX8-202ENST00000419693 ERBINQ96RT1 1412 aa25.41■■□□□ 1.66
SNX8-202ENST00000419693 ABCC3O15438 1527 aa25.41■■□□□ 1.66
SNX8-202ENST00000419693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.4■■□□□ 1.66
SNX8-202ENST00000419693 PLA2R1Q13018 1463 aa25.39■■□□□ 1.65
SNX8-202ENST00000419693 ZC3H13Q5T200 1668 aaKnown RBP25.38■■□□□ 1.65
SNX8-202ENST00000419693 KANK1Q14678 1352 aa25.35■■□□□ 1.65
SNX8-202ENST00000419693 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
SNX8-202ENST00000419693 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
SNX8-202ENST00000419693 NLRP1Q9C000 1473 aa25.34■■□□□ 1.65
SNX8-202ENST00000419693 THEMISQ8N1K5 641 aaPredicted RBP25.33■■□□□ 1.65
SNX8-202ENST00000419693 CEP152O94986 1710 aa25.3■■□□□ 1.64
SNX8-202ENST00000419693 PRDM15P57071 1507 aaPredicted RBP25.3■■□□□ 1.64
SNX8-202ENST00000419693 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
SNX8-202ENST00000419693 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
SNX8-202ENST00000419693 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
SNX8-202ENST00000419693 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
SNX8-202ENST00000419693 UGGT1Q9NYU2 1555 aa25.27■■□□□ 1.64
SNX8-202ENST00000419693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
SNX8-202ENST00000419693 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
SNX8-202ENST00000419693 ZNF335Q9H4Z2 1342 aaPredicted RBP25.24■■□□□ 1.63
SNX8-202ENST00000419693 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
SNX8-202ENST00000419693 ANKRD50Q9ULJ7 1429 aa25.23■■□□□ 1.63
SNX8-202ENST00000419693 ITGAEP38570 1179 aa25.22■■□□□ 1.63
SNX8-202ENST00000419693 LTBP4Q8N2S1 1624 aa25.22■■□□□ 1.63
SNX8-202ENST00000419693 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
SNX8-202ENST00000419693 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
SNX8-202ENST00000419693 LMTK2Q8IWU2 1503 aa25.17■■□□□ 1.62
SNX8-202ENST00000419693 STAG3Q9UJ98 1225 aa25.16■■□□□ 1.62
SNX8-202ENST00000419693 ROCK1Q13464 1354 aa25.15■■□□□ 1.62
SNX8-202ENST00000419693 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.62
SNX8-202ENST00000419693 NEURL4Q96JN8 1562 aa25.14■■□□□ 1.62
SNX8-202ENST00000419693 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
SNX8-202ENST00000419693 IQSEC2Q5JU85 1478 aa25.13■■□□□ 1.61
SNX8-202ENST00000419693 MED14O60244 1454 aa25.09■■□□□ 1.61
SNX8-202ENST00000419693 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
SNX8-202ENST00000419693 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
SNX8-202ENST00000419693 TXNDC2Q86VQ3 553 aa25.08■■□□□ 1.61
SNX8-202ENST00000419693 UBR1Q8IWV7 1749 aa25.08■■□□□ 1.61
SNX8-202ENST00000419693 IDI1Q13907 227 aa25.07■■□□□ 1.6
SNX8-202ENST00000419693 SCAF11Q99590 1463 aaKnown RBP25.05■■□□□ 1.6
SNX8-202ENST00000419693 UBAP1LF5GYI3 381 aa25.05■■□□□ 1.6
SNX8-202ENST00000419693 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
SNX8-202ENST00000419693 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
SNX8-202ENST00000419693 NOS1P29475 1434 aa25.03■■□□□ 1.6
SNX8-202ENST00000419693 RPRD2Q5VT52 1461 aaKnown RBP25.03■■□□□ 1.6
SNX8-202ENST00000419693 IQGAP1P46940 1657 aa25.03■■□□□ 1.6
SNX8-202ENST00000419693 LTKP29376 864 aa25.02■■□□□ 1.6
SNX8-202ENST00000419693 SLIT1O75093 1534 aa25.02■■□□□ 1.6
SNX8-202ENST00000419693 CPS1P31327 1500 aa25.02■■□□□ 1.6
SNX8-202ENST00000419693 TMEM2Q9UHN6 1383 aa25.01■■□□□ 1.59
SNX8-202ENST00000419693 ARHGAP23Q9P227 1491 aa25.01■■□□□ 1.59
SNX8-202ENST00000419693 UNC13BO14795 1591 aa25.01■■□□□ 1.59
SNX8-202ENST00000419693 SYNMO15061 1565 aa25.01■■□□□ 1.59
SNX8-202ENST00000419693 NUP155O75694 1391 aa25■■□□□ 1.59
SNX8-202ENST00000419693 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
SNX8-202ENST00000419693 TET3O43151 1660 aa25■■□□□ 1.59
SNX8-202ENST00000419693 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
SNX8-202ENST00000419693 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
SNX8-202ENST00000419693 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
SNX8-202ENST00000419693 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
SNX8-202ENST00000419693 TOM1O60784 492 aa24.92■■□□□ 1.58
SNX8-202ENST00000419693 CHGAP10645 457 aaKnown RBP24.92■■□□□ 1.58
SNX8-202ENST00000419693 BCANQ96GW7 911 aa24.92■■□□□ 1.58
SNX8-202ENST00000419693 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
SNX8-202ENST00000419693 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.58
SNX8-202ENST00000419693 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
SNX8-202ENST00000419693 PIP4K2BP78356 416 aa24.87■■□□□ 1.57
SNX8-202ENST00000419693 E9PCH4 1651 aa24.87■■□□□ 1.57
SNX8-202ENST00000419693 SLC26A8Q96RN1 970 aa24.85■■□□□ 1.57
SNX8-202ENST00000419693 LRRC7Q96NW7 1537 aa24.83■■□□□ 1.57
SNX8-202ENST00000419693 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
SNX8-202ENST00000419693 NAIPQ13075 1403 aa24.83■■□□□ 1.57
SNX8-202ENST00000419693 RIMS2Q9UQ26 1411 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms