RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 IQGAP3Q86VI3 1631 aa11.65□□□□□ -0.55
COL12A1-204ENST00000419671 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
COL12A1-204ENST00000419671 PKD2Q13563 968 aa11.64□□□□□ -0.55
COL12A1-204ENST00000419671 FKBP8Q14318 412 aa11.64□□□□□ -0.55
COL12A1-204ENST00000419671 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
COL12A1-204ENST00000419671 ERBINQ96RT1 1412 aa11.63□□□□□ -0.55
COL12A1-204ENST00000419671 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL12A1-204ENST00000419671 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
COL12A1-204ENST00000419671 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
COL12A1-204ENST00000419671 MIER1Q8N108 512 aa11.62□□□□□ -0.55
COL12A1-204ENST00000419671 ADGRL1O94910 1474 aa11.62□□□□□ -0.55
COL12A1-204ENST00000419671 RTEL1-TNFRSF6BF6WH68 1400 aa11.62□□□□□ -0.55
COL12A1-204ENST00000419671 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
COL12A1-204ENST00000419671 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
COL12A1-204ENST00000419671 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
COL12A1-204ENST00000419671 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
COL12A1-204ENST00000419671 SCAPERQ9BY12 1400 aa11.59□□□□□ -0.55
COL12A1-204ENST00000419671 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
COL12A1-204ENST00000419671 HIRIP3Q9BW71 556 aaPredicted RBP11.58□□□□□ -0.55
COL12A1-204ENST00000419671 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
COL12A1-204ENST00000419671 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
COL12A1-204ENST00000419671 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
COL12A1-204ENST00000419671 E9PCH4 1651 aa11.56□□□□□ -0.56
COL12A1-204ENST00000419671 KDM5CP41229 1560 aa11.56□□□□□ -0.56
COL12A1-204ENST00000419671 NBPF8Q3BBV2 869 aa11.56□□□□□ -0.56
COL12A1-204ENST00000419671 ZNF518AQ6AHZ1 1483 aa11.55□□□□□ -0.56
COL12A1-204ENST00000419671 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
COL12A1-204ENST00000419671 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-204ENST00000419671 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
COL12A1-204ENST00000419671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL12A1-204ENST00000419671 MROH1Q8NDA8 1641 aa11.54□□□□□ -0.56
COL12A1-204ENST00000419671 VWDEQ8N2E2 1590 aa11.53□□□□□ -0.56
COL12A1-204ENST00000419671 POGZQ7Z3K3 1410 aa11.53□□□□□ -0.56
COL12A1-204ENST00000419671 TET3O43151 1660 aa11.53□□□□□ -0.56
COL12A1-204ENST00000419671 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.56
COL12A1-204ENST00000419671 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
COL12A1-204ENST00000419671 GLI2P10070 1586 aa11.52□□□□□ -0.56
COL12A1-204ENST00000419671 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.56
COL12A1-204ENST00000419671 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-204ENST00000419671 ATP10AO60312 1499 aa11.51□□□□□ -0.57
COL12A1-204ENST00000419671 UHRF1BP1Q6BDS2 1440 aa11.51□□□□□ -0.57
COL12A1-204ENST00000419671 NEO1Q92859 1461 aa11.51□□□□□ -0.57
COL12A1-204ENST00000419671 DIP2BQ9P265 1576 aa11.51□□□□□ -0.57
COL12A1-204ENST00000419671 ABCA6Q8N139 1617 aa11.51□□□□□ -0.57
COL12A1-204ENST00000419671 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
COL12A1-204ENST00000419671 CCDC144AA2RUR9 1427 aa11.5□□□□□ -0.57
COL12A1-204ENST00000419671 HSPA5P11021 654 aaKnown RBP11.5□□□□□ -0.57
COL12A1-204ENST00000419671 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
COL12A1-204ENST00000419671 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
COL12A1-204ENST00000419671 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
COL12A1-204ENST00000419671 RNF17Q9BXT8 1623 aaKnown RBP11.5□□□□□ -0.57
COL12A1-204ENST00000419671 CEP152O94986 1710 aa11.49□□□□□ -0.57
COL12A1-204ENST00000419671 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
COL12A1-204ENST00000419671 FRMPD1Q5SYB0 1578 aa11.49□□□□□ -0.57
COL12A1-204ENST00000419671 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
COL12A1-204ENST00000419671 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
COL12A1-204ENST00000419671 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL12A1-204ENST00000419671 PPRC1Q5VV67 1664 aaKnown RBP11.48□□□□□ -0.57
COL12A1-204ENST00000419671 TRPM1Q7Z4N2 1603 aa11.47□□□□□ -0.57
COL12A1-204ENST00000419671 A2MP01023 1474 aa11.47□□□□□ -0.57
COL12A1-204ENST00000419671 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
COL12A1-204ENST00000419671 TRPM2O94759 1503 aa11.47□□□□□ -0.57
COL12A1-204ENST00000419671 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
COL12A1-204ENST00000419671 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.58
COL12A1-204ENST00000419671 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
COL12A1-204ENST00000419671 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
COL12A1-204ENST00000419671 WASHC2AQ641Q2 1341 aa11.45□□□□□ -0.58
COL12A1-204ENST00000419671 KIF3BO15066 747 aa11.45□□□□□ -0.58
COL12A1-204ENST00000419671 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
COL12A1-204ENST00000419671 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-204ENST00000419671 EFCAB6Q5THR3 1501 aa11.44□□□□□ -0.58
COL12A1-204ENST00000419671 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
COL12A1-204ENST00000419671 PTPRTO14522 1441 aa11.44□□□□□ -0.58
COL12A1-204ENST00000419671 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
COL12A1-204ENST00000419671 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 DCAF11Q8TEB1 546 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 BCL11AQ9H165 835 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 KANK1Q14678 1352 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-204ENST00000419671 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
COL12A1-204ENST00000419671 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
COL12A1-204ENST00000419671 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
COL12A1-204ENST00000419671 USP47Q96K76 1375 aa11.42□□□□□ -0.58
COL12A1-204ENST00000419671 KIF1BO60333 1816 aa11.42□□□□□ -0.58
COL12A1-204ENST00000419671 LAMC1P11047 1609 aa11.41□□□□□ -0.58
COL12A1-204ENST00000419671 RGL3Q3MIN7 710 aa11.41□□□□□ -0.58
COL12A1-204ENST00000419671 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
COL12A1-204ENST00000419671 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
COL12A1-204ENST00000419671 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.59
COL12A1-204ENST00000419671 IFT172Q9UG01 1749 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 CAMSAP1Q5T5Y3 1602 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 NEURL4Q96JN8 1562 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 UGGT1Q9NYU2 1555 aa11.39□□□□□ -0.59
COL12A1-204ENST00000419671 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-204ENST00000419671 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
COL12A1-204ENST00000419671 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms