RNA–Protein interactions for RNA: ENST00000419652.5

NR1H3-206, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-206ENST00000419652 ADGRL2O95490 1459 aa24.03■■□□□ 1.44
NR1H3-206ENST00000419652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.03■■□□□ 1.44
NR1H3-206ENST00000419652 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
NR1H3-206ENST00000419652 KDM5DQ9BY66 1539 aa24.01■■□□□ 1.43
NR1H3-206ENST00000419652 NCOA1Q15788 1441 aa24■■□□□ 1.43
NR1H3-206ENST00000419652 CEBPAP49715 358 aaPredicted RBP23.99■■□□□ 1.43
NR1H3-206ENST00000419652 RRBP1Q9P2E9 1410 aaKnown RBP23.99■■□□□ 1.43
NR1H3-206ENST00000419652 PREX1Q8TCU6 1659 aa23.97■■□□□ 1.43
NR1H3-206ENST00000419652 ZC3H13Q5T200 1668 aaKnown RBP23.96■■□□□ 1.43
NR1H3-206ENST00000419652 ITGAEP38570 1179 aa23.96■■□□□ 1.43
NR1H3-206ENST00000419652 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
NR1H3-206ENST00000419652 WASHC2CQ9Y4E1 1318 aa23.95■■□□□ 1.42
NR1H3-206ENST00000419652 LMTK3Q96Q04 1460 aa23.93■■□□□ 1.42
NR1H3-206ENST00000419652 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
NR1H3-206ENST00000419652 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
NR1H3-206ENST00000419652 PRDM15P57071 1507 aaPredicted RBP23.92■■□□□ 1.42
NR1H3-206ENST00000419652 NPATQ14207 1427 aa23.92■■□□□ 1.42
NR1H3-206ENST00000419652 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
NR1H3-206ENST00000419652 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
NR1H3-206ENST00000419652 UHRF1BP1Q6BDS2 1440 aa23.91■■□□□ 1.42
NR1H3-206ENST00000419652 ABCC3O15438 1527 aa23.9■■□□□ 1.42
NR1H3-206ENST00000419652 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
NR1H3-206ENST00000419652 ANKRD50Q9ULJ7 1429 aa23.9■■□□□ 1.42
NR1H3-206ENST00000419652 KANK1Q14678 1352 aa23.9■■□□□ 1.42
NR1H3-206ENST00000419652 CEP152O94986 1710 aa23.87■■□□□ 1.41
NR1H3-206ENST00000419652 PZPP20742 1482 aa23.87■■□□□ 1.41
NR1H3-206ENST00000419652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.85■■□□□ 1.413e-8■■■□□ 14.9
NR1H3-206ENST00000419652 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
NR1H3-206ENST00000419652 MYO3AQ8NEV4 1616 aa23.83■■□□□ 1.41
NR1H3-206ENST00000419652 HSPA2P54652 639 aa23.78■■□□□ 1.4
NR1H3-206ENST00000419652 UNC13BO14795 1591 aa23.78■■□□□ 1.4
NR1H3-206ENST00000419652 TNRQ92752 1358 aa23.78■■□□□ 1.4
NR1H3-206ENST00000419652 ZNF142P52746 1687 aaPredicted RBP23.77■■□□□ 1.4
NR1H3-206ENST00000419652 VWDEQ8N2E2 1590 aa23.77■■□□□ 1.4
NR1H3-206ENST00000419652 LMTK2Q8IWU2 1503 aa23.76■■□□□ 1.39
NR1H3-206ENST00000419652 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
NR1H3-206ENST00000419652 GCC2Q8IWJ2 1684 aa23.75■■□□□ 1.39
NR1H3-206ENST00000419652 FBXO31Q5XUX0 539 aaPredicted RBP23.74■■□□□ 1.39
NR1H3-206ENST00000419652 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
NR1H3-206ENST00000419652 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
NR1H3-206ENST00000419652 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
NR1H3-206ENST00000419652 EFCAB6Q5THR3 1501 aa23.72■■□□□ 1.39
NR1H3-206ENST00000419652 A2ML1A8K2U0 1454 aa23.7■■□□□ 1.38
NR1H3-206ENST00000419652 NLRP1Q9C000 1473 aa23.7■■□□□ 1.38
NR1H3-206ENST00000419652 TET3O43151 1660 aa23.7■■□□□ 1.38
NR1H3-206ENST00000419652 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
NR1H3-206ENST00000419652 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
NR1H3-206ENST00000419652 NAIPQ13075 1403 aa23.67■■□□□ 1.38
NR1H3-206ENST00000419652 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
NR1H3-206ENST00000419652 NUP155O75694 1391 aa23.65■■□□□ 1.38
NR1H3-206ENST00000419652 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.38
NR1H3-206ENST00000419652 PLA2R1Q13018 1463 aa23.62■■□□□ 1.37
NR1H3-206ENST00000419652 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
NR1H3-206ENST00000419652 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
NR1H3-206ENST00000419652 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
NR1H3-206ENST00000419652 E9PCH4 1651 aa23.56■■□□□ 1.36
NR1H3-206ENST00000419652 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
NR1H3-206ENST00000419652 NOS1P29475 1434 aa23.55■■□□□ 1.36
NR1H3-206ENST00000419652 SYNMO15061 1565 aa23.55■■□□□ 1.36
NR1H3-206ENST00000419652 PKD2Q13563 968 aa23.54■■□□□ 1.36
NR1H3-206ENST00000419652 UBR1Q8IWV7 1749 aa23.53■■□□□ 1.36
NR1H3-206ENST00000419652 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
NR1H3-206ENST00000419652 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
NR1H3-206ENST00000419652 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
NR1H3-206ENST00000419652 STAG3Q9UJ98 1225 aa23.52■■□□□ 1.36
NR1H3-206ENST00000419652 PTPRTO14522 1441 aa23.5■■□□□ 1.35
NR1H3-206ENST00000419652 KDM5AP29375 1690 aaKnown RBP23.49■■□□□ 1.35
NR1H3-206ENST00000419652 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
NR1H3-206ENST00000419652 NCKAP5LQ9HCH0 1330 aa23.48■■□□□ 1.35
NR1H3-206ENST00000419652 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
NR1H3-206ENST00000419652 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
NR1H3-206ENST00000419652 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
NR1H3-206ENST00000419652 SETD5Q9C0A6 1442 aa23.47■■□□□ 1.35
NR1H3-206ENST00000419652 SPHKAPQ2M3C7 1700 aa23.46■■□□□ 1.35
NR1H3-206ENST00000419652 IDI1Q13907 227 aa23.45■■□□□ 1.34
NR1H3-206ENST00000419652 SLC4A1APQ9BWU0 796 aaKnown RBP23.42■■□□□ 1.34
NR1H3-206ENST00000419652 NEURL4Q96JN8 1562 aa23.42■■□□□ 1.34
NR1H3-206ENST00000419652 SLIT1O75093 1534 aa23.41■■□□□ 1.34
NR1H3-206ENST00000419652 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
NR1H3-206ENST00000419652 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
NR1H3-206ENST00000419652 ARHGAP23Q9P227 1491 aa23.39■■□□□ 1.34
NR1H3-206ENST00000419652 TMEM2Q9UHN6 1383 aa23.39■■□□□ 1.33
NR1H3-206ENST00000419652 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
NR1H3-206ENST00000419652 NPHP4O75161 1426 aaPredicted RBP23.38■■□□□ 1.33
NR1H3-206ENST00000419652 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
NR1H3-206ENST00000419652 TRPM2O94759 1503 aa23.38■■□□□ 1.33
NR1H3-206ENST00000419652 CHGAP10645 457 aaKnown RBP23.37■■□□□ 1.33
NR1H3-206ENST00000419652 MED14O60244 1454 aa23.36■■□□□ 1.33
NR1H3-206ENST00000419652 TMEM131LA2VDJ0 1609 aa23.36■■□□□ 1.33
NR1H3-206ENST00000419652 MYO5BQ9ULV0 1848 aa23.35■■□□□ 1.33
NR1H3-206ENST00000419652 TXNDC2Q86VQ3 553 aa23.34■■□□□ 1.33
NR1H3-206ENST00000419652 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
NR1H3-206ENST00000419652 HDGFP51858 240 aaKnown RBP23.3■■□□□ 1.32
NR1H3-206ENST00000419652 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
NR1H3-206ENST00000419652 MPHOSPH9Q99550 1183 aa23.29■■□□□ 1.32
NR1H3-206ENST00000419652 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
NR1H3-206ENST00000419652 LTKP29376 864 aa23.28■■□□□ 1.32
NR1H3-206ENST00000419652 KIF1BO60333 1816 aa23.28■■□□□ 1.32
NR1H3-206ENST00000419652 ZNF335Q9H4Z2 1342 aaPredicted RBP23.27■■□□□ 1.32
NR1H3-206ENST00000419652 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms