RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 RRP7BPQ9NSQ0 103 aa31.58■■■□□ 2.65
HLCS-203ENST00000419461 KDM5DQ9BY66 1539 aa31.58■■■□□ 2.65
HLCS-203ENST00000419461 SHANK2Q9UPX8 1470 aa31.56■■■□□ 2.64
HLCS-203ENST00000419461 CROCC2H7BZ55 1655 aa31.55■■■□□ 2.64
HLCS-203ENST00000419461 CHIC2Q9UKJ5 165 aa31.55■■■□□ 2.64
HLCS-203ENST00000419461 KIF15Q9NS87 1388 aa31.55■■■□□ 2.64
HLCS-203ENST00000419461 DNMT1P26358 1616 aaKnown RBP31.54■■■□□ 2.64
HLCS-203ENST00000419461 MYO3AQ8NEV4 1616 aa31.54■■■□□ 2.64
HLCS-203ENST00000419461 NCOA1Q15788 1441 aa31.54■■■□□ 2.64
HLCS-203ENST00000419461 RNF17Q9BXT8 1623 aaKnown RBP31.53■■■□□ 2.64
HLCS-203ENST00000419461 DUOX2Q9NRD8 1548 aa31.53■■■□□ 2.64
HLCS-203ENST00000419461 PZPP20742 1482 aa31.52■■■□□ 2.64
HLCS-203ENST00000419461 FAM135AQ9P2D6 1515 aa31.51■■■□□ 2.63
HLCS-203ENST00000419461 CAMSAP1Q5T5Y3 1602 aa31.51■■■□□ 2.63
HLCS-203ENST00000419461 MROH1Q8NDA8 1641 aa31.51■■■□□ 2.63
HLCS-203ENST00000419461 DMRT2Q9Y5R5 561 aa31.51■■■□□ 2.63
HLCS-203ENST00000419461 PPARGC1BQ86YN6 1023 aaKnown RBP31.49■■■□□ 2.63
HLCS-203ENST00000419461 EIF2AK4Q9P2K8 1649 aaKnown RBP31.49■■■□□ 2.63
HLCS-203ENST00000419461 ABCC3O15438 1527 aa31.49■■■□□ 2.63
HLCS-203ENST00000419461 NCKAP5LQ9HCH0 1330 aa31.49■■■□□ 2.63
HLCS-203ENST00000419461 CEP170BQ9Y4F5 1589 aaPredicted RBP31.48■■■□□ 2.63
HLCS-203ENST00000419461 FAM50AQ14320 339 aaKnown RBP31.48■■■□□ 2.63
HLCS-203ENST00000419461 FBXO41Q8TF61 875 aa31.48■■■□□ 2.63
HLCS-203ENST00000419461 TNRQ92752 1358 aa31.47■■■□□ 2.63
HLCS-203ENST00000419461 PTPRTO14522 1441 aa31.47■■■□□ 2.63
HLCS-203ENST00000419461 ZNF142P52746 1687 aaPredicted RBP31.47■■■□□ 2.63
HLCS-203ENST00000419461 CERKQ8TCT0 537 aa31.44■■■□□ 2.62
HLCS-203ENST00000419461 A2ML1A8K2U0 1454 aa31.43■■■□□ 2.62
HLCS-203ENST00000419461 ERBINQ96RT1 1412 aa31.41■■■□□ 2.62
HLCS-203ENST00000419461 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
HLCS-203ENST00000419461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.38■■■□□ 2.61
HLCS-203ENST00000419461 PLA2R1Q13018 1463 aa31.37■■■□□ 2.61
HLCS-203ENST00000419461 CEP152O94986 1710 aa31.36■■■□□ 2.61
HLCS-203ENST00000419461 ZC3H13Q5T200 1668 aaKnown RBP31.35■■■□□ 2.61
HLCS-203ENST00000419461 ADGRL2O95490 1459 aa31.34■■■□□ 2.61
HLCS-203ENST00000419461 PRDM15P57071 1507 aaPredicted RBP31.34■■■□□ 2.61
HLCS-203ENST00000419461 PKD2Q13563 968 aa31.33■■■□□ 2.61
HLCS-203ENST00000419461 ERVK-7P63135 1459 aa31.32■■■□□ 2.6
HLCS-203ENST00000419461 SPATA31D1Q6ZQQ2 1576 aa31.3■■■□□ 2.6
HLCS-203ENST00000419461 DEPDC5O75140 1603 aa31.29■■■□□ 2.6
HLCS-203ENST00000419461 NLRP1Q9C000 1473 aa31.28■■■□□ 2.6
HLCS-203ENST00000419461 LTBP4Q8N2S1 1624 aa31.27■■■□□ 2.6
HLCS-203ENST00000419461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.27■■■□□ 2.6
HLCS-203ENST00000419461 CFAP65Q6ZU64 1925 aaKnown RBP31.26■■■□□ 2.6
HLCS-203ENST00000419461 ARHGAP31Q2M1Z3 1444 aa31.24■■■□□ 2.59
HLCS-203ENST00000419461 ZNF335Q9H4Z2 1342 aaPredicted RBP31.24■■■□□ 2.59
HLCS-203ENST00000419461 UGGT1Q9NYU2 1555 aa31.23■■■□□ 2.59
HLCS-203ENST00000419461 VWDEQ8N2E2 1590 aa31.22■■■□□ 2.59
HLCS-203ENST00000419461 THEMISQ8N1K5 641 aaPredicted RBP31.22■■■□□ 2.59
HLCS-203ENST00000419461 KANK1Q14678 1352 aa31.21■■■□□ 2.59
HLCS-203ENST00000419461 ANKRD50Q9ULJ7 1429 aa31.21■■■□□ 2.59
HLCS-203ENST00000419461 NEURL4Q96JN8 1562 aa31.19■■■□□ 2.58
HLCS-203ENST00000419461 ITGAEP38570 1179 aa31.18■■■□□ 2.58
HLCS-203ENST00000419461 LMTK2Q8IWU2 1503 aa31.18■■■□□ 2.58
HLCS-203ENST00000419461 ANKLE2Q86XL3 938 aa31.17■■■□□ 2.58
HLCS-203ENST00000419461 ROCK1Q13464 1354 aa31.12■■■□□ 2.57
HLCS-203ENST00000419461 POLR1AO95602 1720 aaPredicted RBP31.11■■■□□ 2.57
HLCS-203ENST00000419461 UBR1Q8IWV7 1749 aa31.07■■■□□ 2.56
HLCS-203ENST00000419461 EFCAB6Q5THR3 1501 aa31.07■■■□□ 2.56
HLCS-203ENST00000419461 NPHP4O75161 1426 aaPredicted RBP31.07■■■□□ 2.56
HLCS-203ENST00000419461 IDI1Q13907 227 aa31.06■■■□□ 2.56
HLCS-203ENST00000419461 MED14O60244 1454 aa31.06■■■□□ 2.56
HLCS-203ENST00000419461 LTKP29376 864 aa31.04■■■□□ 2.56
HLCS-203ENST00000419461 NOS1P29475 1434 aa31.04■■■□□ 2.56
HLCS-203ENST00000419461 SYNMO15061 1565 aa31.04■■■□□ 2.56
HLCS-203ENST00000419461 RRBP1Q9P2E9 1410 aaKnown RBP31.02■■■□□ 2.56
HLCS-203ENST00000419461 PIK3C2BO00750 1634 aa31.02■■■□□ 2.56
HLCS-203ENST00000419461 ARHGAP23Q9P227 1491 aa31■■■□□ 2.55
HLCS-203ENST00000419461 UNC13BO14795 1591 aa31■■■□□ 2.55
HLCS-203ENST00000419461 IQSEC2Q5JU85 1478 aa30.99■■■□□ 2.55
HLCS-203ENST00000419461 TXNDC2Q86VQ3 553 aa30.97■■■□□ 2.55
HLCS-203ENST00000419461 SLIT1O75093 1534 aa30.97■■■□□ 2.55
HLCS-203ENST00000419461 IQGAP1P46940 1657 aa30.95■■■□□ 2.55
HLCS-203ENST00000419461 SCAF11Q99590 1463 aaKnown RBP30.95■■■□□ 2.54
HLCS-203ENST00000419461 TET3O43151 1660 aa30.94■■■□□ 2.54
HLCS-203ENST00000419461 STAG3Q9UJ98 1225 aa30.94■■■□□ 2.54
HLCS-203ENST00000419461 TMEM2Q9UHN6 1383 aa30.93■■■□□ 2.54
HLCS-203ENST00000419461 RPRD2Q5VT52 1461 aaKnown RBP30.92■■■□□ 2.54
HLCS-203ENST00000419461 NUP155O75694 1391 aa30.92■■■□□ 2.54
HLCS-203ENST00000419461 SLC52A1Q9NWF4 448 aa30.89■■■□□ 2.54
HLCS-203ENST00000419461 UBAP1LF5GYI3 381 aa30.87■■■□□ 2.53
HLCS-203ENST00000419461 EID1Q9Y6B2 187 aa30.87■■■□□ 2.53
HLCS-203ENST00000419461 IQGAP3Q86VI3 1631 aa30.87■■■□□ 2.53
HLCS-203ENST00000419461 GCC2Q8IWJ2 1684 aa30.87■■■□□ 2.53
HLCS-203ENST00000419461 CPS1P31327 1500 aa30.86■■■□□ 2.53
HLCS-203ENST00000419461 E9PCH4 1651 aa30.86■■■□□ 2.53
HLCS-203ENST00000419461 STRCP1A6NGW2 1772 aa30.84■■■□□ 2.53
HLCS-203ENST00000419461 ADGRB3O60242 1522 aa30.84■■■□□ 2.53
HLCS-203ENST00000419461 KDM5AP29375 1690 aaKnown RBP30.84■■■□□ 2.53
HLCS-203ENST00000419461 NAIPQ13075 1403 aa30.81■■■□□ 2.52
HLCS-203ENST00000419461 SENP3Q9H4L4 574 aaPredicted RBP30.76■■■□□ 2.51
HLCS-203ENST00000419461 LRRC7Q96NW7 1537 aa30.75■■■□□ 2.51
HLCS-203ENST00000419461 TMEM131LA2VDJ0 1609 aa30.74■■■□□ 2.51
HLCS-203ENST00000419461 SLC26A8Q96RN1 970 aa30.74■■■□□ 2.51
HLCS-203ENST00000419461 MYO5BQ9ULV0 1848 aa30.74■■■□□ 2.51
HLCS-203ENST00000419461 ZFYVE9O95405 1425 aa30.73■■■□□ 2.51
HLCS-203ENST00000419461 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
HLCS-203ENST00000419461 RIMS2Q9UQ26 1411 aa30.71■■■□□ 2.51
HLCS-203ENST00000419461 ALKQ9UM73 1620 aa30.69■■■□□ 2.5
HLCS-203ENST00000419461 HFM1A2PYH4 1435 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms