RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NPATQ14207 1427 aa31.44■■■□□ 2.62
GTF3A-202ENST00000419181 UHRF1BP1Q6BDS2 1440 aa31.44■■■□□ 2.62
GTF3A-202ENST00000419181 KDM5DQ9BY66 1539 aa31.43■■■□□ 2.62
GTF3A-202ENST00000419181 KIF15Q9NS87 1388 aa31.43■■■□□ 2.62
GTF3A-202ENST00000419181 FAM50AQ14320 339 aaKnown RBP31.39■■■□□ 2.62
GTF3A-202ENST00000419181 PTPRKQ15262 1439 aa31.38■■■□□ 2.61
GTF3A-202ENST00000419181 MROH1Q8NDA8 1641 aa31.36■■■□□ 2.61
GTF3A-202ENST00000419181 ERBINQ96RT1 1412 aa31.36■■■□□ 2.61
GTF3A-202ENST00000419181 ANKRD30AQ9BXX3 1397 aa31.35■■■□□ 2.61
GTF3A-202ENST00000419181 PPARGC1BQ86YN6 1023 aaKnown RBP31.35■■■□□ 2.61
GTF3A-202ENST00000419181 RRP7BPQ9NSQ0 103 aa31.35■■■□□ 2.61
GTF3A-202ENST00000419181 ADGRL2O95490 1459 aa31.34■■■□□ 2.61
GTF3A-202ENST00000419181 WASHC2CQ9Y4E1 1318 aa31.34■■■□□ 2.61
GTF3A-202ENST00000419181 CHIC2Q9UKJ5 165 aa31.33■■■□□ 2.61
GTF3A-202ENST00000419181 NCOA1Q15788 1441 aa31.32■■■□□ 2.61
GTF3A-202ENST00000419181 ZC3H13Q5T200 1668 aaKnown RBP31.32■■■□□ 2.6
GTF3A-202ENST00000419181 ABCC3O15438 1527 aa31.3■■■□□ 2.6
GTF3A-202ENST00000419181 PZPP20742 1482 aa31.3■■■□□ 2.6
GTF3A-202ENST00000419181 MYO3AQ8NEV4 1616 aa31.3■■■□□ 2.6
GTF3A-202ENST00000419181 PRDM15P57071 1507 aaPredicted RBP31.28■■■□□ 2.6
GTF3A-202ENST00000419181 ZNF142P52746 1687 aaPredicted RBP31.27■■■□□ 2.6
GTF3A-202ENST00000419181 DEPDC5O75140 1603 aa31.27■■■□□ 2.6
GTF3A-202ENST00000419181 ILDR1Q86SU0 546 aaPredicted RBP31.25■■■□□ 2.59
GTF3A-202ENST00000419181 STRCQ7RTU9 1775 aa31.24■■■□□ 2.59
GTF3A-202ENST00000419181 CEP152O94986 1710 aa31.24■■■□□ 2.59
GTF3A-202ENST00000419181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.59
GTF3A-202ENST00000419181 CEP170BQ9Y4F5 1589 aaPredicted RBP31.22■■■□□ 2.59
GTF3A-202ENST00000419181 FBXO31Q5XUX0 539 aaPredicted RBP31.2■■■□□ 2.59
GTF3A-202ENST00000419181 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.58
GTF3A-202ENST00000419181 TNRQ92752 1358 aa31.17■■■□□ 2.58
GTF3A-202ENST00000419181 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.58
GTF3A-202ENST00000419181 ROCK1Q13464 1354 aa31.14■■■□□ 2.58
GTF3A-202ENST00000419181 RRBP1Q9P2E9 1410 aaKnown RBP31.14■■■□□ 2.58
GTF3A-202ENST00000419181 ANKRD50Q9ULJ7 1429 aa31.14■■■□□ 2.58
GTF3A-202ENST00000419181 VWDEQ8N2E2 1590 aa31.13■■■□□ 2.57
GTF3A-202ENST00000419181 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
GTF3A-202ENST00000419181 KANK1Q14678 1352 aa31.1■■■□□ 2.57
GTF3A-202ENST00000419181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.1■■■□□ 2.574e-8■■■□□ 16.7
GTF3A-202ENST00000419181 ERVK-7P63135 1459 aa31.09■■■□□ 2.57
GTF3A-202ENST00000419181 ARHGAP31Q2M1Z3 1444 aa31.09■■■□□ 2.57
GTF3A-202ENST00000419181 DMRT2Q9Y5R5 561 aa31.09■■■□□ 2.57
GTF3A-202ENST00000419181 LMTK2Q8IWU2 1503 aa31.08■■■□□ 2.57
GTF3A-202ENST00000419181 PLA2R1Q13018 1463 aa31.08■■■□□ 2.57
GTF3A-202ENST00000419181 NLRP1Q9C000 1473 aa31.08■■■□□ 2.57
GTF3A-202ENST00000419181 CFAP65Q6ZU64 1925 aaKnown RBP31.05■■■□□ 2.56
GTF3A-202ENST00000419181 ITGAEP38570 1179 aa31.05■■■□□ 2.56
GTF3A-202ENST00000419181 PTPRTO14522 1441 aa31.04■■■□□ 2.56
GTF3A-202ENST00000419181 UNC13BO14795 1591 aa31.01■■■□□ 2.56
GTF3A-202ENST00000419181 FBXO41Q8TF61 875 aa31■■■□□ 2.55
GTF3A-202ENST00000419181 EFCAB6Q5THR3 1501 aa30.99■■■□□ 2.55
GTF3A-202ENST00000419181 UGGT1Q9NYU2 1555 aa30.98■■■□□ 2.55
GTF3A-202ENST00000419181 NCKAP5LQ9HCH0 1330 aa30.96■■■□□ 2.55
GTF3A-202ENST00000419181 PKD2Q13563 968 aa30.95■■■□□ 2.55
GTF3A-202ENST00000419181 TET3O43151 1660 aa30.93■■■□□ 2.54
GTF3A-202ENST00000419181 POLR1AO95602 1720 aaPredicted RBP30.92■■■□□ 2.54
GTF3A-202ENST00000419181 CERKQ8TCT0 537 aa30.91■■■□□ 2.54
GTF3A-202ENST00000419181 THEMISQ8N1K5 641 aaPredicted RBP30.9■■■□□ 2.54
GTF3A-202ENST00000419181 UBR1Q8IWV7 1749 aa30.9■■■□□ 2.54
GTF3A-202ENST00000419181 GCC2Q8IWJ2 1684 aa30.89■■■□□ 2.54
GTF3A-202ENST00000419181 IQGAP3Q86VI3 1631 aa30.88■■■□□ 2.53
GTF3A-202ENST00000419181 RPRD2Q5VT52 1461 aaKnown RBP30.88■■■□□ 2.53
GTF3A-202ENST00000419181 NEURL4Q96JN8 1562 aa30.88■■■□□ 2.53
GTF3A-202ENST00000419181 NOS1P29475 1434 aa30.87■■■□□ 2.53
GTF3A-202ENST00000419181 SYNMO15061 1565 aa30.87■■■□□ 2.53
GTF3A-202ENST00000419181 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
GTF3A-202ENST00000419181 NAIPQ13075 1403 aa30.81■■■□□ 2.52
GTF3A-202ENST00000419181 ANKLE2Q86XL3 938 aa30.8■■■□□ 2.52
GTF3A-202ENST00000419181 E9PCH4 1651 aa30.8■■■□□ 2.52
GTF3A-202ENST00000419181 KDM5AP29375 1690 aaKnown RBP30.8■■■□□ 2.52
GTF3A-202ENST00000419181 LTBP4Q8N2S1 1624 aa30.8■■■□□ 2.52
GTF3A-202ENST00000419181 NUP155O75694 1391 aa30.79■■■□□ 2.52
GTF3A-202ENST00000419181 MED14O60244 1454 aa30.77■■■□□ 2.52
GTF3A-202ENST00000419181 HFM1A2PYH4 1435 aa30.77■■■□□ 2.52
GTF3A-202ENST00000419181 SLIT1O75093 1534 aa30.76■■■□□ 2.51
GTF3A-202ENST00000419181 IDI1Q13907 227 aa30.75■■■□□ 2.51
GTF3A-202ENST00000419181 ARHGAP23Q9P227 1491 aa30.75■■■□□ 2.51
GTF3A-202ENST00000419181 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
GTF3A-202ENST00000419181 NPHP4O75161 1426 aaPredicted RBP30.72■■■□□ 2.51
GTF3A-202ENST00000419181 IQGAP1P46940 1657 aa30.71■■■□□ 2.51
GTF3A-202ENST00000419181 ADGRB3O60242 1522 aa30.71■■■□□ 2.51
GTF3A-202ENST00000419181 ZNF335Q9H4Z2 1342 aaPredicted RBP30.71■■■□□ 2.51
GTF3A-202ENST00000419181 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
GTF3A-202ENST00000419181 TMEM2Q9UHN6 1383 aa30.67■■■□□ 2.5
GTF3A-202ENST00000419181 STAG3Q9UJ98 1225 aa30.67■■■□□ 2.5
GTF3A-202ENST00000419181 LTKP29376 864 aa30.63■■■□□ 2.49
GTF3A-202ENST00000419181 IQSEC2Q5JU85 1478 aa30.62■■■□□ 2.49
GTF3A-202ENST00000419181 TXNDC2Q86VQ3 553 aa30.61■■■□□ 2.49
GTF3A-202ENST00000419181 MYO5BQ9ULV0 1848 aa30.61■■■□□ 2.49
GTF3A-202ENST00000419181 TMEM131LA2VDJ0 1609 aa30.6■■■□□ 2.49
GTF3A-202ENST00000419181 SPHKAPQ2M3C7 1700 aa30.59■■■□□ 2.49
GTF3A-202ENST00000419181 EID1Q9Y6B2 187 aa30.59■■■□□ 2.49
GTF3A-202ENST00000419181 CPS1P31327 1500 aa30.54■■■□□ 2.48
GTF3A-202ENST00000419181 ZFYVE9O95405 1425 aa30.52■■■□□ 2.48
GTF3A-202ENST00000419181 TRIM52Q96A61 297 aa30.51■■■□□ 2.47
GTF3A-202ENST00000419181 STRCP1A6NGW2 1772 aa30.49■■■□□ 2.47
GTF3A-202ENST00000419181 TRPM2O94759 1503 aa30.47■■■□□ 2.47
GTF3A-202ENST00000419181 RIMS2Q9UQ26 1411 aa30.47■■■□□ 2.47
GTF3A-202ENST00000419181 CHGAP10645 457 aaKnown RBP30.45■■■□□ 2.47
GTF3A-202ENST00000419181 CLTCL1P53675 1640 aa30.44■■■□□ 2.46
GTF3A-202ENST00000419181 SLC4A1APQ9BWU0 796 aaKnown RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms