RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.35
CNOT9-203ENST00000418808 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.35
CNOT9-203ENST00000418808 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
CNOT9-203ENST00000418808 ANKRD50Q9ULJ7 1429 aa12.82□□□□□ -0.36
CNOT9-203ENST00000418808 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
CNOT9-203ENST00000418808 DEPDC5O75140 1603 aa12.81□□□□□ -0.36
CNOT9-203ENST00000418808 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
CNOT9-203ENST00000418808 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
CNOT9-203ENST00000418808 EIF2AK4Q9P2K8 1649 aaKnown RBP12.79□□□□□ -0.36
CNOT9-203ENST00000418808 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
CNOT9-203ENST00000418808 UNC13BO14795 1591 aa12.78□□□□□ -0.36
CNOT9-203ENST00000418808 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
CNOT9-203ENST00000418808 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.37
CNOT9-203ENST00000418808 PZPP20742 1482 aa12.77□□□□□ -0.37
CNOT9-203ENST00000418808 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
CNOT9-203ENST00000418808 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
CNOT9-203ENST00000418808 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-203ENST00000418808 KIF3BO15066 747 aa12.75□□□□□ -0.37
CNOT9-203ENST00000418808 KDM5DQ9BY66 1539 aa12.75□□□□□ -0.37
CNOT9-203ENST00000418808 ABCC3O15438 1527 aa12.73□□□□□ -0.37
CNOT9-203ENST00000418808 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
CNOT9-203ENST00000418808 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
CNOT9-203ENST00000418808 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
CNOT9-203ENST00000418808 LMTK2Q8IWU2 1503 aa12.72□□□□□ -0.37
CNOT9-203ENST00000418808 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.37
CNOT9-203ENST00000418808 HRCP23327 699 aa12.7□□□□□ -0.38
CNOT9-203ENST00000418808 MLECQ14165 292 aa12.7□□□□□ -0.38
CNOT9-203ENST00000418808 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
CNOT9-203ENST00000418808 CEP152O94986 1710 aa12.69□□□□□ -0.38
CNOT9-203ENST00000418808 GGT6Q6P531 493 aa12.69□□□□□ -0.38
CNOT9-203ENST00000418808 FAM135AQ9P2D6 1515 aa12.68□□□□□ -0.38
CNOT9-203ENST00000418808 NUP155O75694 1391 aa12.68□□□□□ -0.38
CNOT9-203ENST00000418808 NPATQ14207 1427 aa12.67□□□□□ -0.38
CNOT9-203ENST00000418808 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
CNOT9-203ENST00000418808 EFCAB6Q5THR3 1501 aa12.66□□□□□ -0.38
CNOT9-203ENST00000418808 PTPRMP28827 1452 aa12.65□□□□□ -0.38
CNOT9-203ENST00000418808 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-203ENST00000418808 E9PCH4 1651 aa12.65□□□□□ -0.38
CNOT9-203ENST00000418808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNOT9-203ENST00000418808 CAMSAP1Q5T5Y3 1602 aa12.65□□□□□ -0.38
CNOT9-203ENST00000418808 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
CNOT9-203ENST00000418808 TET3O43151 1660 aa12.64□□□□□ -0.39
CNOT9-203ENST00000418808 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
CNOT9-203ENST00000418808 CEBPAP49715 358 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-203ENST00000418808 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-203ENST00000418808 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
CNOT9-203ENST00000418808 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
CNOT9-203ENST00000418808 MPHOSPH9Q99550 1183 aa12.63□□□□□ -0.39
CNOT9-203ENST00000418808 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
CNOT9-203ENST00000418808 C3P01024 1663 aa12.63□□□□□ -0.39
CNOT9-203ENST00000418808 ZC3H13Q5T200 1668 aaKnown RBP12.63□□□□□ -0.39
CNOT9-203ENST00000418808 NOS1P29475 1434 aa12.62□□□□□ -0.39
CNOT9-203ENST00000418808 MROH2AA6NES4 1674 aa12.62□□□□□ -0.39
CNOT9-203ENST00000418808 SYNMO15061 1565 aa12.62□□□□□ -0.39
CNOT9-203ENST00000418808 PTPRTO14522 1441 aa12.62□□□□□ -0.39
CNOT9-203ENST00000418808 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
CNOT9-203ENST00000418808 SPATA31D1Q6ZQQ2 1576 aa12.6□□□□□ -0.39
CNOT9-203ENST00000418808 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
CNOT9-203ENST00000418808 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
CNOT9-203ENST00000418808 PKD2Q13563 968 aa12.59□□□□□ -0.39
CNOT9-203ENST00000418808 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
CNOT9-203ENST00000418808 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
CNOT9-203ENST00000418808 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
CNOT9-203ENST00000418808 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
CNOT9-203ENST00000418808 FBXO41Q8TF61 875 aa12.57□□□□□ -0.4
CNOT9-203ENST00000418808 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CNOT9-203ENST00000418808 PIK3C2BO00750 1634 aa12.56□□□□□ -0.4
CNOT9-203ENST00000418808 RPRD2Q5VT52 1461 aaKnown RBP12.56□□□□□ -0.4
CNOT9-203ENST00000418808 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
CNOT9-203ENST00000418808 KANK1Q14678 1352 aa12.55□□□□□ -0.4
CNOT9-203ENST00000418808 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
CNOT9-203ENST00000418808 TRPM2O94759 1503 aa12.54□□□□□ -0.4
CNOT9-203ENST00000418808 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
CNOT9-203ENST00000418808 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.4
CNOT9-203ENST00000418808 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.41
CNOT9-203ENST00000418808 IDI1Q13907 227 aa12.51□□□□□ -0.41
CNOT9-203ENST00000418808 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
CNOT9-203ENST00000418808 SIN3AQ96ST3 1273 aa12.5□□□□□ -0.41
CNOT9-203ENST00000418808 TNRQ92752 1358 aa12.5□□□□□ -0.41
CNOT9-203ENST00000418808 MYO3AQ8NEV4 1616 aa12.49□□□□□ -0.41
CNOT9-203ENST00000418808 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
CNOT9-203ENST00000418808 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
CNOT9-203ENST00000418808 A2ML1A8K2U0 1454 aa12.46□□□□□ -0.41
CNOT9-203ENST00000418808 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
CNOT9-203ENST00000418808 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
CNOT9-203ENST00000418808 CEP170BQ9Y4F5 1589 aaPredicted RBP12.45□□□□□ -0.42
CNOT9-203ENST00000418808 ZNF142P52746 1687 aaPredicted RBP12.45□□□□□ -0.42
CNOT9-203ENST00000418808 MYO5BQ9ULV0 1848 aa12.44□□□□□ -0.42
CNOT9-203ENST00000418808 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
CNOT9-203ENST00000418808 NLRP1Q9C000 1473 aa12.44□□□□□ -0.42
CNOT9-203ENST00000418808 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
CNOT9-203ENST00000418808 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
CNOT9-203ENST00000418808 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
CNOT9-203ENST00000418808 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
CNOT9-203ENST00000418808 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
CNOT9-203ENST00000418808 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
CNOT9-203ENST00000418808 HSPA2P54652 639 aa12.41□□□□□ -0.42
CNOT9-203ENST00000418808 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
CNOT9-203ENST00000418808 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
CNOT9-203ENST00000418808 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms