RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CCDC136Q96JN2 1154 aa21.78■■□□□ 1.08
SYNGAP1-202ENST00000418600 CUX1P39880 1505 aa21.78■■□□□ 1.08
SYNGAP1-202ENST00000418600 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
SYNGAP1-202ENST00000418600 SCAPERQ9BY12 1400 aa21.77■■□□□ 1.08
SYNGAP1-202ENST00000418600 STK31Q9BXU1 1019 aa21.76■■□□□ 1.07
SYNGAP1-202ENST00000418600 PPP1R1BQ9UD71 204 aaPredicted RBP21.76■■□□□ 1.07
SYNGAP1-202ENST00000418600 TAOK2Q9UL54 1235 aa21.76■■□□□ 1.07
SYNGAP1-202ENST00000418600 GORABQ5T7V8 394 aa21.72■■□□□ 1.07
SYNGAP1-202ENST00000418600 FRAT2O75474 233 aaPredicted RBP21.72■■□□□ 1.07
SYNGAP1-202ENST00000418600 STRN4Q9NRL3 753 aa21.72■■□□□ 1.07
SYNGAP1-202ENST00000418600 FGD1P98174 961 aa21.71■■□□□ 1.07
SYNGAP1-202ENST00000418600 KCNJ4P48050 445 aa21.7■■□□□ 1.07
SYNGAP1-202ENST00000418600 LMOD3Q0VAK6 560 aa21.7■■□□□ 1.07
SYNGAP1-202ENST00000418600 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
SYNGAP1-202ENST00000418600 WASHC2AQ641Q2 1341 aa21.7■■□□□ 1.06
SYNGAP1-202ENST00000418600 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
SYNGAP1-202ENST00000418600 USP35Q9P2H5 1018 aa21.7■■□□□ 1.06
SYNGAP1-202ENST00000418600 RAPGEF4Q8WZA2 1011 aa21.7■■□□□ 1.06
SYNGAP1-202ENST00000418600 EIF5BO60841 1220 aaKnown RBP21.69■■□□□ 1.06
SYNGAP1-202ENST00000418600 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
SYNGAP1-202ENST00000418600 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
SYNGAP1-202ENST00000418600 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
SYNGAP1-202ENST00000418600 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
SYNGAP1-202ENST00000418600 NUTM2GQ5VZR2 741 aa21.67■■□□□ 1.06
SYNGAP1-202ENST00000418600 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
SYNGAP1-202ENST00000418600 ZNF644Q9H582 1327 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-202ENST00000418600 TEFQ10587 303 aa21.65■■□□□ 1.06
SYNGAP1-202ENST00000418600 FKBP8Q14318 412 aa21.65■■□□□ 1.06
SYNGAP1-202ENST00000418600 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
SYNGAP1-202ENST00000418600 HDAC5Q9UQL6 1122 aa21.64■■□□□ 1.06
SYNGAP1-202ENST00000418600 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
SYNGAP1-202ENST00000418600 HECW1Q76N89 1606 aa21.64■■□□□ 1.05
SYNGAP1-202ENST00000418600 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
SYNGAP1-202ENST00000418600 PDE3BQ13370 1112 aa21.61■■□□□ 1.05
SYNGAP1-202ENST00000418600 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
SYNGAP1-202ENST00000418600 FYCO1Q9BQS8 1478 aa21.61■■□□□ 1.05
SYNGAP1-202ENST00000418600 FBXW7Q969H0 707 aa21.6■■□□□ 1.05
SYNGAP1-202ENST00000418600 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
SYNGAP1-202ENST00000418600 ABTB2Q8N961 1025 aa21.6■■□□□ 1.05
SYNGAP1-202ENST00000418600 UBAP1LF5GYI3 381 aa21.59■■□□□ 1.05
SYNGAP1-202ENST00000418600 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
SYNGAP1-202ENST00000418600 IQGAP2Q13576 1575 aa21.58■■□□□ 1.04
SYNGAP1-202ENST00000418600 PLB1Q6P1J6 1458 aa21.58■■□□□ 1.04
SYNGAP1-202ENST00000418600 CLSTN1O94985 981 aa21.58■■□□□ 1.04
SYNGAP1-202ENST00000418600 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
SYNGAP1-202ENST00000418600 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
SYNGAP1-202ENST00000418600 NLRP6P59044 892 aa21.57■■□□□ 1.04
SYNGAP1-202ENST00000418600 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
SYNGAP1-202ENST00000418600 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
SYNGAP1-202ENST00000418600 TOM1O60784 492 aa21.56■■□□□ 1.04
SYNGAP1-202ENST00000418600 SLC26A8Q96RN1 970 aa21.56■■□□□ 1.04
SYNGAP1-202ENST00000418600 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
SYNGAP1-202ENST00000418600 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
SYNGAP1-202ENST00000418600 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
SYNGAP1-202ENST00000418600 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
SYNGAP1-202ENST00000418600 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
SYNGAP1-202ENST00000418600 ANKRD50Q9ULJ7 1429 aa21.54■■□□□ 1.04
SYNGAP1-202ENST00000418600 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
SYNGAP1-202ENST00000418600 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
SYNGAP1-202ENST00000418600 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
SYNGAP1-202ENST00000418600 GLIPR1L2Q4G1C9 344 aa21.53■■□□□ 1.04
SYNGAP1-202ENST00000418600 TOM1L2Q6ZVM7 507 aa21.53■■□□□ 1.04
SYNGAP1-202ENST00000418600 KIF21BO75037 1637 aa21.52■■□□□ 1.04
SYNGAP1-202ENST00000418600 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
SYNGAP1-202ENST00000418600 SMG6Q86US8 1419 aaKnown RBP21.52■■□□□ 1.04
SYNGAP1-202ENST00000418600 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.03
SYNGAP1-202ENST00000418600 NCOA2Q15596 1464 aa21.52■■□□□ 1.03
SYNGAP1-202ENST00000418600 NCLP19338 710 aaKnown RBP21.52■■□□□ 1.03
SYNGAP1-202ENST00000418600 CENPJQ9HC77 1338 aaPredicted RBP21.52■■□□□ 1.03
SYNGAP1-202ENST00000418600 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 RALBP1Q15311 655 aa21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 ZRSR1Q15695 479 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 UNC13AQ9UPW8 1703 aa21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 PMFBP1Q8TBY8 1022 aa21.51■■□□□ 1.03
SYNGAP1-202ENST00000418600 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
SYNGAP1-202ENST00000418600 NOL10Q9BSC4 688 aaKnown RBP21.49■■□□□ 1.03
SYNGAP1-202ENST00000418600 CUL7Q14999 1698 aa21.49■■□□□ 1.03
SYNGAP1-202ENST00000418600 CEBPAP49715 358 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-202ENST00000418600 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
SYNGAP1-202ENST00000418600 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
SYNGAP1-202ENST00000418600 GPATCH3Q96I76 525 aa21.48■■□□□ 1.03
SYNGAP1-202ENST00000418600 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
SYNGAP1-202ENST00000418600 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
SYNGAP1-202ENST00000418600 PRDM11Q9NQV5 511 aa21.47■■□□□ 1.03
SYNGAP1-202ENST00000418600 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
SYNGAP1-202ENST00000418600 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 ADAMTS2O95450 1211 aa21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 APBB1O00213 710 aa21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 IRX6P78412 446 aaPredicted RBP21.46■■□□□ 1.03
SYNGAP1-202ENST00000418600 CTDP1Q9Y5B0 961 aaPredicted RBP21.45■■□□□ 1.02
SYNGAP1-202ENST00000418600 EHBP1L1Q8N3D4 1523 aa21.45■■□□□ 1.02
SYNGAP1-202ENST00000418600 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
SYNGAP1-202ENST00000418600 CABP2Q9NPB3 220 aa21.44■■□□□ 1.02
SYNGAP1-202ENST00000418600 NEXNQ0ZGT2 675 aa21.44■■□□□ 1.02
SYNGAP1-202ENST00000418600 NLRP13Q86W25 1043 aa21.43■■□□□ 1.02
SYNGAP1-202ENST00000418600 TATP17735 454 aaPredicted RBP21.42■■□□□ 1.02
SYNGAP1-202ENST00000418600 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms