RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ESF1Q9H501 851 aaKnown RBP32.05■■■□□ 2.72
PKNOX1-202ENST00000418336 PTPRKQ15262 1439 aa32.04■■■□□ 2.72
PKNOX1-202ENST00000418336 HSPA2P54652 639 aa32.04■■■□□ 2.72
PKNOX1-202ENST00000418336 KDM5DQ9BY66 1539 aa32.04■■■□□ 2.72
PKNOX1-202ENST00000418336 KIF15Q9NS87 1388 aa32.02■■■□□ 2.72
PKNOX1-202ENST00000418336 ADGRL2O95490 1459 aa32■■■□□ 2.71
PKNOX1-202ENST00000418336 UHRF1BP1Q6BDS2 1440 aa31.99■■■□□ 2.71
PKNOX1-202ENST00000418336 NCOA1Q15788 1441 aa31.98■■■□□ 2.71
PKNOX1-202ENST00000418336 ERBINQ96RT1 1412 aa31.98■■■□□ 2.71
PKNOX1-202ENST00000418336 PPARGC1BQ86YN6 1023 aaKnown RBP31.96■■■□□ 2.71
PKNOX1-202ENST00000418336 ABCC3O15438 1527 aa31.95■■■□□ 2.7
PKNOX1-202ENST00000418336 RRP7BPQ9NSQ0 103 aa31.94■■■□□ 2.7
PKNOX1-202ENST00000418336 DEPDC5O75140 1603 aa31.93■■■□□ 2.7
PKNOX1-202ENST00000418336 PZPP20742 1482 aa31.92■■■□□ 2.7
PKNOX1-202ENST00000418336 PRDM15P57071 1507 aaPredicted RBP31.92■■■□□ 2.7
PKNOX1-202ENST00000418336 MYO3AQ8NEV4 1616 aa31.92■■■□□ 2.7
PKNOX1-202ENST00000418336 STRCQ7RTU9 1775 aa31.91■■■□□ 2.7
PKNOX1-202ENST00000418336 FAM50AQ14320 339 aaKnown RBP31.91■■■□□ 2.7
PKNOX1-202ENST00000418336 CHIC2Q9UKJ5 165 aa31.91■■■□□ 2.7
PKNOX1-202ENST00000418336 ZC3H13Q5T200 1668 aaKnown RBP31.91■■■□□ 2.7
PKNOX1-202ENST00000418336 ANKRD30AQ9BXX3 1397 aa31.91■■■□□ 2.7
PKNOX1-202ENST00000418336 ZNF142P52746 1687 aaPredicted RBP31.9■■■□□ 2.7
PKNOX1-202ENST00000418336 WASHC2CQ9Y4E1 1318 aa31.88■■■□□ 2.69
PKNOX1-202ENST00000418336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.87■■■□□ 2.691e-6■■■□□ 18.4
PKNOX1-202ENST00000418336 FBXO31Q5XUX0 539 aaPredicted RBP31.85■■■□□ 2.69
PKNOX1-202ENST00000418336 CEP152O94986 1710 aa31.85■■■□□ 2.69
PKNOX1-202ENST00000418336 VWDEQ8N2E2 1590 aa31.84■■■□□ 2.69
PKNOX1-202ENST00000418336 CEP170BQ9Y4F5 1589 aaPredicted RBP31.82■■■□□ 2.68
PKNOX1-202ENST00000418336 CAMSAP1Q5T5Y3 1602 aa31.81■■■□□ 2.68
PKNOX1-202ENST00000418336 RRBP1Q9P2E9 1410 aaKnown RBP31.81■■■□□ 2.68
PKNOX1-202ENST00000418336 SPATA31D1Q6ZQQ2 1576 aa31.78■■■□□ 2.68
PKNOX1-202ENST00000418336 ROCK1Q13464 1354 aa31.77■■■□□ 2.68
PKNOX1-202ENST00000418336 LMTK2Q8IWU2 1503 aa31.76■■■□□ 2.68
PKNOX1-202ENST00000418336 TNRQ92752 1358 aa31.76■■■□□ 2.67
PKNOX1-202ENST00000418336 A2ML1A8K2U0 1454 aa31.75■■■□□ 2.67
PKNOX1-202ENST00000418336 ARHGAP31Q2M1Z3 1444 aa31.75■■■□□ 2.67
PKNOX1-202ENST00000418336 ANKRD50Q9ULJ7 1429 aa31.74■■■□□ 2.67
PKNOX1-202ENST00000418336 ERVK-7P63135 1459 aa31.73■■■□□ 2.67
PKNOX1-202ENST00000418336 PLA2R1Q13018 1463 aa31.7■■■□□ 2.66
PKNOX1-202ENST00000418336 PTPRTO14522 1441 aa31.66■■■□□ 2.66
PKNOX1-202ENST00000418336 NLRP1Q9C000 1473 aa31.66■■■□□ 2.66
PKNOX1-202ENST00000418336 UNC13BO14795 1591 aa31.64■■■□□ 2.66
PKNOX1-202ENST00000418336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.63■■■□□ 2.65
PKNOX1-202ENST00000418336 EFCAB6Q5THR3 1501 aa31.61■■■□□ 2.65
PKNOX1-202ENST00000418336 CFAP65Q6ZU64 1925 aaKnown RBP31.59■■■□□ 2.65
PKNOX1-202ENST00000418336 KANK1Q14678 1352 aa31.59■■■□□ 2.65
PKNOX1-202ENST00000418336 NCKAP5LQ9HCH0 1330 aa31.57■■■□□ 2.64
PKNOX1-202ENST00000418336 ITGAEP38570 1179 aa31.57■■■□□ 2.64
PKNOX1-202ENST00000418336 DMRT2Q9Y5R5 561 aa31.56■■■□□ 2.64
PKNOX1-202ENST00000418336 NEURL4Q96JN8 1562 aa31.56■■■□□ 2.64
PKNOX1-202ENST00000418336 UGGT1Q9NYU2 1555 aa31.56■■■□□ 2.64
PKNOX1-202ENST00000418336 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
PKNOX1-202ENST00000418336 SYNMO15061 1565 aa31.53■■■□□ 2.64
PKNOX1-202ENST00000418336 NOS1P29475 1434 aa31.53■■■□□ 2.64
PKNOX1-202ENST00000418336 UBR1Q8IWV7 1749 aa31.52■■■□□ 2.64
PKNOX1-202ENST00000418336 TET3O43151 1660 aa31.52■■■□□ 2.64
PKNOX1-202ENST00000418336 PKD2Q13563 968 aa31.52■■■□□ 2.64
PKNOX1-202ENST00000418336 IQGAP3Q86VI3 1631 aa31.5■■■□□ 2.63
PKNOX1-202ENST00000418336 POLR1AO95602 1720 aaPredicted RBP31.49■■■□□ 2.63
PKNOX1-202ENST00000418336 LTBP4Q8N2S1 1624 aa31.48■■■□□ 2.63
PKNOX1-202ENST00000418336 GCC2Q8IWJ2 1684 aa31.48■■■□□ 2.63
PKNOX1-202ENST00000418336 NAIPQ13075 1403 aa31.47■■■□□ 2.63
PKNOX1-202ENST00000418336 RPRD2Q5VT52 1461 aaKnown RBP31.46■■■□□ 2.63
PKNOX1-202ENST00000418336 PIK3C2BO00750 1634 aa31.46■■■□□ 2.63
PKNOX1-202ENST00000418336 THEMISQ8N1K5 641 aaPredicted RBP31.44■■■□□ 2.62
PKNOX1-202ENST00000418336 E9PCH4 1651 aa31.42■■■□□ 2.62
PKNOX1-202ENST00000418336 MED14O60244 1454 aa31.42■■■□□ 2.62
PKNOX1-202ENST00000418336 ARHGAP23Q9P227 1491 aa31.42■■■□□ 2.62
PKNOX1-202ENST00000418336 KDM5AP29375 1690 aaKnown RBP31.4■■■□□ 2.62
PKNOX1-202ENST00000418336 HFM1A2PYH4 1435 aa31.4■■■□□ 2.62
PKNOX1-202ENST00000418336 SLIT1O75093 1534 aa31.39■■■□□ 2.62
PKNOX1-202ENST00000418336 CERKQ8TCT0 537 aa31.38■■■□□ 2.61
PKNOX1-202ENST00000418336 IDI1Q13907 227 aa31.37■■■□□ 2.61
PKNOX1-202ENST00000418336 NUP155O75694 1391 aa31.36■■■□□ 2.61
PKNOX1-202ENST00000418336 ANKLE2Q86XL3 938 aa31.33■■■□□ 2.61
PKNOX1-202ENST00000418336 ZNF335Q9H4Z2 1342 aaPredicted RBP31.32■■■□□ 2.6
PKNOX1-202ENST00000418336 FBXO41Q8TF61 875 aa31.32■■■□□ 2.6
PKNOX1-202ENST00000418336 ADGRB3O60242 1522 aa31.31■■■□□ 2.6
PKNOX1-202ENST00000418336 NPHP4O75161 1426 aaPredicted RBP31.31■■■□□ 2.6
PKNOX1-202ENST00000418336 IQGAP1P46940 1657 aa31.29■■■□□ 2.6
PKNOX1-202ENST00000418336 LTKP29376 864 aa31.29■■■□□ 2.6
PKNOX1-202ENST00000418336 TMEM2Q9UHN6 1383 aa31.28■■■□□ 2.6
PKNOX1-202ENST00000418336 SLC52A1Q9NWF4 448 aa31.27■■■□□ 2.6
PKNOX1-202ENST00000418336 SCAF11Q99590 1463 aaKnown RBP31.27■■■□□ 2.6
PKNOX1-202ENST00000418336 TMEM131LA2VDJ0 1609 aa31.24■■■□□ 2.59
PKNOX1-202ENST00000418336 MYO5BQ9ULV0 1848 aa31.21■■■□□ 2.59
PKNOX1-202ENST00000418336 IQSEC2Q5JU85 1478 aa31.21■■■□□ 2.59
PKNOX1-202ENST00000418336 ZFYVE9O95405 1425 aa31.18■■■□□ 2.58
PKNOX1-202ENST00000418336 SPHKAPQ2M3C7 1700 aa31.17■■■□□ 2.58
PKNOX1-202ENST00000418336 STRCP1A6NGW2 1772 aa31.17■■■□□ 2.58
PKNOX1-202ENST00000418336 TXNDC2Q86VQ3 553 aa31.16■■■□□ 2.58
PKNOX1-202ENST00000418336 CPS1P31327 1500 aa31.11■■■□□ 2.57
PKNOX1-202ENST00000418336 STAG3Q9UJ98 1225 aa31.11■■■□□ 2.57
PKNOX1-202ENST00000418336 TRPM2O94759 1503 aa31.08■■■□□ 2.57
PKNOX1-202ENST00000418336 EID1Q9Y6B2 187 aa31.07■■■□□ 2.56
PKNOX1-202ENST00000418336 CLTCL1P53675 1640 aa31.06■■■□□ 2.56
PKNOX1-202ENST00000418336 RIMS2Q9UQ26 1411 aa31.06■■■□□ 2.56
PKNOX1-202ENST00000418336 TRIM52Q96A61 297 aa31■■■□□ 2.55
PKNOX1-202ENST00000418336 PLEKHG1Q9ULL1 1385 aa31■■■□□ 2.55
PKNOX1-202ENST00000418336 LRRC7Q96NW7 1537 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms