RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 C3P01024 1663 aa16.84■□□□□ 0.29
TM9SF4-203ENST00000417389 HSPA2P54652 639 aa16.83■□□□□ 0.28
TM9SF4-203ENST00000417389 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
TM9SF4-203ENST00000417389 LMTK3Q96Q04 1460 aa16.81■□□□□ 0.28
TM9SF4-203ENST00000417389 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
TM9SF4-203ENST00000417389 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
TM9SF4-203ENST00000417389 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
TM9SF4-203ENST00000417389 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
TM9SF4-203ENST00000417389 EIF2AK4Q9P2K8 1649 aaKnown RBP16.8■□□□□ 0.28
TM9SF4-203ENST00000417389 KANK1Q14678 1352 aa16.78■□□□□ 0.28
TM9SF4-203ENST00000417389 ADGRL2O95490 1459 aa16.78■□□□□ 0.28
TM9SF4-203ENST00000417389 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
TM9SF4-203ENST00000417389 PTPRKQ15262 1439 aa16.77■□□□□ 0.27
TM9SF4-203ENST00000417389 RNF17Q9BXT8 1623 aaKnown RBP16.76■□□□□ 0.27
TM9SF4-203ENST00000417389 NPATQ14207 1427 aa16.76■□□□□ 0.27
TM9SF4-203ENST00000417389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
TM9SF4-203ENST00000417389 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
TM9SF4-203ENST00000417389 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
TM9SF4-203ENST00000417389 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
TM9SF4-203ENST00000417389 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
TM9SF4-203ENST00000417389 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
TM9SF4-203ENST00000417389 ABCC3O15438 1527 aa16.73■□□□□ 0.27
TM9SF4-203ENST00000417389 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
TM9SF4-203ENST00000417389 TNRQ92752 1358 aa16.72■□□□□ 0.27
TM9SF4-203ENST00000417389 PZPP20742 1482 aa16.71■□□□□ 0.27
TM9SF4-203ENST00000417389 ZC3H13Q5T200 1668 aaKnown RBP16.71■□□□□ 0.27
TM9SF4-203ENST00000417389 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
TM9SF4-203ENST00000417389 CEP152O94986 1710 aa16.7■□□□□ 0.26
TM9SF4-203ENST00000417389 PRDM15P57071 1507 aaPredicted RBP16.7■□□□□ 0.26
TM9SF4-203ENST00000417389 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
TM9SF4-203ENST00000417389 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
TM9SF4-203ENST00000417389 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
TM9SF4-203ENST00000417389 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
TM9SF4-203ENST00000417389 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
TM9SF4-203ENST00000417389 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
TM9SF4-203ENST00000417389 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
TM9SF4-203ENST00000417389 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
TM9SF4-203ENST00000417389 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
TM9SF4-203ENST00000417389 NUP155O75694 1391 aa16.62■□□□□ 0.25
TM9SF4-203ENST00000417389 NCKAP5LQ9HCH0 1330 aa16.61■□□□□ 0.25
TM9SF4-203ENST00000417389 NLRP1Q9C000 1473 aa16.61■□□□□ 0.25
TM9SF4-203ENST00000417389 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
TM9SF4-203ENST00000417389 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
TM9SF4-203ENST00000417389 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
TM9SF4-203ENST00000417389 ZNF142P52746 1687 aaPredicted RBP16.59■□□□□ 0.25
TM9SF4-203ENST00000417389 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
TM9SF4-203ENST00000417389 SPATA31D1Q6ZQQ2 1576 aa16.59■□□□□ 0.25
TM9SF4-203ENST00000417389 UNC13BO14795 1591 aa16.58■□□□□ 0.24
TM9SF4-203ENST00000417389 VWDEQ8N2E2 1590 aa16.58■□□□□ 0.24
TM9SF4-203ENST00000417389 UGGT1Q9NYU2 1555 aa16.58■□□□□ 0.24
TM9SF4-203ENST00000417389 EFCAB6Q5THR3 1501 aa16.57■□□□□ 0.24
TM9SF4-203ENST00000417389 NAIPQ13075 1403 aa16.57■□□□□ 0.24
TM9SF4-203ENST00000417389 PKD2Q13563 968 aa16.56■□□□□ 0.24
TM9SF4-203ENST00000417389 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
TM9SF4-203ENST00000417389 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
TM9SF4-203ENST00000417389 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
TM9SF4-203ENST00000417389 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
TM9SF4-203ENST00000417389 TET3O43151 1660 aa16.53■□□□□ 0.24
TM9SF4-203ENST00000417389 GCC2Q8IWJ2 1684 aa16.53■□□□□ 0.24
TM9SF4-203ENST00000417389 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
TM9SF4-203ENST00000417389 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
TM9SF4-203ENST00000417389 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
TM9SF4-203ENST00000417389 IDI1Q13907 227 aa16.51■□□□□ 0.23
TM9SF4-203ENST00000417389 PTPRTO14522 1441 aa16.51■□□□□ 0.23
TM9SF4-203ENST00000417389 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
TM9SF4-203ENST00000417389 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
TM9SF4-203ENST00000417389 NOS1P29475 1434 aa16.49■□□□□ 0.23
TM9SF4-203ENST00000417389 SYNMO15061 1565 aa16.48■□□□□ 0.23
TM9SF4-203ENST00000417389 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
TM9SF4-203ENST00000417389 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
TM9SF4-203ENST00000417389 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
TM9SF4-203ENST00000417389 E9PCH4 1651 aa16.46■□□□□ 0.23
TM9SF4-203ENST00000417389 BCANQ96GW7 911 aa16.46■□□□□ 0.23
TM9SF4-203ENST00000417389 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
TM9SF4-203ENST00000417389 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
TM9SF4-203ENST00000417389 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
TM9SF4-203ENST00000417389 PPP1R15AO75807 674 aaPredicted RBP16.44■□□□□ 0.22
TM9SF4-203ENST00000417389 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
TM9SF4-203ENST00000417389 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
TM9SF4-203ENST00000417389 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
TM9SF4-203ENST00000417389 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
TM9SF4-203ENST00000417389 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
TM9SF4-203ENST00000417389 TMEM2Q9UHN6 1383 aa16.42■□□□□ 0.22
TM9SF4-203ENST00000417389 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
TM9SF4-203ENST00000417389 LTKP29376 864 aa16.41■□□□□ 0.22
TM9SF4-203ENST00000417389 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
TM9SF4-203ENST00000417389 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
TM9SF4-203ENST00000417389 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
TM9SF4-203ENST00000417389 SLIT1O75093 1534 aa16.39■□□□□ 0.21
TM9SF4-203ENST00000417389 FOXD1Q16676 465 aa16.38■□□□□ 0.21
TM9SF4-203ENST00000417389 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
TM9SF4-203ENST00000417389 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
TM9SF4-203ENST00000417389 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
TM9SF4-203ENST00000417389 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
TM9SF4-203ENST00000417389 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
TM9SF4-203ENST00000417389 MED14O60244 1454 aa16.37■□□□□ 0.21
TM9SF4-203ENST00000417389 ARHGAP23Q9P227 1491 aa16.37■□□□□ 0.21
TM9SF4-203ENST00000417389 SPHKAPQ2M3C7 1700 aa16.37■□□□□ 0.21
TM9SF4-203ENST00000417389 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
TM9SF4-203ENST00000417389 KDM5AP29375 1690 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms