RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 MLH3Q9UHC1 1453 aa11.11□□□□□ -0.63
COPS3-202ENST00000417352 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
COPS3-202ENST00000417352 GPATCH8Q9UKJ3 1502 aaKnown RBP11.09□□□□□ -0.63
COPS3-202ENST00000417352 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
COPS3-202ENST00000417352 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
COPS3-202ENST00000417352 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
COPS3-202ENST00000417352 C3P01024 1663 aa11.08□□□□□ -0.64
COPS3-202ENST00000417352 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
COPS3-202ENST00000417352 HAX1O00165 279 aa11.08□□□□□ -0.64
COPS3-202ENST00000417352 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
COPS3-202ENST00000417352 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
COPS3-202ENST00000417352 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
COPS3-202ENST00000417352 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
COPS3-202ENST00000417352 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
COPS3-202ENST00000417352 ZMYM3Q14202 1370 aa11.04□□□□□ -0.64
COPS3-202ENST00000417352 REREQ9P2R6 1566 aa11.04□□□□□ -0.64
COPS3-202ENST00000417352 AGLP35573 1532 aa11.04□□□□□ -0.64
COPS3-202ENST00000417352 STRCQ7RTU9 1775 aa11.03□□□□□ -0.64
COPS3-202ENST00000417352 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
COPS3-202ENST00000417352 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
COPS3-202ENST00000417352 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
COPS3-202ENST00000417352 A2MP01023 1474 aa11.03□□□□□ -0.64
COPS3-202ENST00000417352 CLTCQ00610 1675 aaKnown RBP11.03□□□□□ -0.64
COPS3-202ENST00000417352 KIAA1107Q9UPP5 1409 aa11.02□□□□□ -0.64
COPS3-202ENST00000417352 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.65
COPS3-202ENST00000417352 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
COPS3-202ENST00000417352 KIF3BO15066 747 aa11.01□□□□□ -0.65
COPS3-202ENST00000417352 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
COPS3-202ENST00000417352 TIAM1Q13009 1591 aa11□□□□□ -0.65
COPS3-202ENST00000417352 TSPY4P0CV99 314 aa11□□□□□ -0.65
COPS3-202ENST00000417352 TSPY10P0CW01 314 aa11□□□□□ -0.65
COPS3-202ENST00000417352 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
COPS3-202ENST00000417352 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
COPS3-202ENST00000417352 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
COPS3-202ENST00000417352 NCOA2Q15596 1464 aa10.98□□□□□ -0.65
COPS3-202ENST00000417352 CAMSAP1Q5T5Y3 1602 aa10.98□□□□□ -0.65
COPS3-202ENST00000417352 MROH2AA6NES4 1674 aa10.97□□□□□ -0.65
COPS3-202ENST00000417352 NPATQ14207 1427 aa10.96□□□□□ -0.65
COPS3-202ENST00000417352 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
COPS3-202ENST00000417352 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.65
COPS3-202ENST00000417352 CAMSAP2Q08AD1 1489 aa10.95□□□□□ -0.66
COPS3-202ENST00000417352 PTPRTO14522 1441 aa10.95□□□□□ -0.66
COPS3-202ENST00000417352 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
COPS3-202ENST00000417352 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
COPS3-202ENST00000417352 CCDC141Q6ZP82 1450 aa10.94□□□□□ -0.66
COPS3-202ENST00000417352 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
COPS3-202ENST00000417352 NCOA1Q15788 1441 aa10.94□□□□□ -0.66
COPS3-202ENST00000417352 KANK4Q5T7N3 995 aaPredicted RBP10.94□□□□□ -0.66
COPS3-202ENST00000417352 PLXNC1O60486 1568 aa10.94□□□□□ -0.66
COPS3-202ENST00000417352 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
COPS3-202ENST00000417352 EVX2Q03828 476 aa10.93□□□□□ -0.66
COPS3-202ENST00000417352 PKD2Q13563 968 aa10.93□□□□□ -0.66
COPS3-202ENST00000417352 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
COPS3-202ENST00000417352 RTEL1-TNFRSF6BF6WH68 1400 aa10.92□□□□□ -0.66
COPS3-202ENST00000417352 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
COPS3-202ENST00000417352 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
COPS3-202ENST00000417352 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
COPS3-202ENST00000417352 VPS8Q8N3P4 1428 aa10.92□□□□□ -0.66
COPS3-202ENST00000417352 CEP170BQ9Y4F5 1589 aaPredicted RBP10.91□□□□□ -0.66
COPS3-202ENST00000417352 LRRC9Q6ZRR7 1453 aa10.91□□□□□ -0.66
COPS3-202ENST00000417352 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.67
COPS3-202ENST00000417352 TNRQ92752 1358 aa10.9□□□□□ -0.67
COPS3-202ENST00000417352 ANKLE2Q86XL3 938 aa10.89□□□□□ -0.67
COPS3-202ENST00000417352 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
COPS3-202ENST00000417352 THEMISQ8N1K5 641 aaPredicted RBP10.88□□□□□ -0.67
COPS3-202ENST00000417352 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
COPS3-202ENST00000417352 A2ML1A8K2U0 1454 aa10.87□□□□□ -0.67
COPS3-202ENST00000417352 ZNF142P52746 1687 aaPredicted RBP10.87□□□□□ -0.67
COPS3-202ENST00000417352 KDM5DQ9BY66 1539 aa10.87□□□□□ -0.67
COPS3-202ENST00000417352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
COPS3-202ENST00000417352 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
COPS3-202ENST00000417352 CHIC2Q9UKJ5 165 aa10.86□□□□□ -0.67
COPS3-202ENST00000417352 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
COPS3-202ENST00000417352 ARHGEF5Q12774 1597 aa10.86□□□□□ -0.67
COPS3-202ENST00000417352 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
COPS3-202ENST00000417352 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
COPS3-202ENST00000417352 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
COPS3-202ENST00000417352 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
COPS3-202ENST00000417352 PZPP20742 1482 aa10.84□□□□□ -0.67
COPS3-202ENST00000417352 FAM50AQ14320 339 aaKnown RBP10.83□□□□□ -0.68
COPS3-202ENST00000417352 POLR1AO95602 1720 aaPredicted RBP10.83□□□□□ -0.68
COPS3-202ENST00000417352 FAM135AQ9P2D6 1515 aa10.83□□□□□ -0.68
COPS3-202ENST00000417352 UGGT1Q9NYU2 1555 aa10.82□□□□□ -0.68
COPS3-202ENST00000417352 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
COPS3-202ENST00000417352 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
COPS3-202ENST00000417352 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
COPS3-202ENST00000417352 TOM1O60784 492 aa10.81□□□□□ -0.68
COPS3-202ENST00000417352 ILDR2Q71H61 639 aa10.81□□□□□ -0.68
COPS3-202ENST00000417352 CEP152O94986 1710 aa10.81□□□□□ -0.68
COPS3-202ENST00000417352 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
COPS3-202ENST00000417352 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 MAP3K1Q13233 1512 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 BCANQ96GW7 911 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 NLRP1Q9C000 1473 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 PTPN23Q9H3S7 1636 aa10.8□□□□□ -0.68
COPS3-202ENST00000417352 KANK1Q14678 1352 aa10.79□□□□□ -0.68
COPS3-202ENST00000417352 NPHP4O75161 1426 aaPredicted RBP10.79□□□□□ -0.68
COPS3-202ENST00000417352 ABCC3O15438 1527 aa10.79□□□□□ -0.68
COPS3-202ENST00000417352 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms