RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 CAMSAP1Q5T5Y3 1602 aa34.46■■■■□ 3.11
COL9A2-203ENST00000417105 CERKQ8TCT0 537 aa34.45■■■■□ 3.11
COL9A2-203ENST00000417105 PTPRTO14522 1441 aa34.44■■■■□ 3.1
COL9A2-203ENST00000417105 FGD6Q6ZV73 1430 aa34.44■■■■□ 3.1
COL9A2-203ENST00000417105 FAM135AQ9P2D6 1515 aa34.44■■■■□ 3.1
COL9A2-203ENST00000417105 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
COL9A2-203ENST00000417105 CEP170BQ9Y4F5 1589 aaPredicted RBP34.42■■■■□ 3.1
COL9A2-203ENST00000417105 ABCC5O15440 1437 aa34.42■■■■□ 3.1
COL9A2-203ENST00000417105 ZNF142P52746 1687 aaPredicted RBP34.41■■■■□ 3.1
COL9A2-203ENST00000417105 PZPP20742 1482 aa34.39■■■■□ 3.1
COL9A2-203ENST00000417105 RNF17Q9BXT8 1623 aaKnown RBP34.38■■■■□ 3.09
COL9A2-203ENST00000417105 TCOF1Q13428 1488 aaKnown RBP34.38■■■■□ 3.09
COL9A2-203ENST00000417105 NCKAP5LQ9HCH0 1330 aa34.37■■■■□ 3.09
COL9A2-203ENST00000417105 SHANK2Q9UPX8 1470 aa34.37■■■■□ 3.09
COL9A2-203ENST00000417105 CROCC2H7BZ55 1655 aa34.37■■■■□ 3.09
COL9A2-203ENST00000417105 TNRQ92752 1358 aa34.36■■■■□ 3.09
COL9A2-203ENST00000417105 EIF2AK4Q9P2K8 1649 aaKnown RBP34.36■■■■□ 3.09
COL9A2-203ENST00000417105 DAPK1P53355 1430 aa34.36■■■■□ 3.09
COL9A2-203ENST00000417105 DUOX2Q9NRD8 1548 aa34.35■■■■□ 3.09
COL9A2-203ENST00000417105 KIF15Q9NS87 1388 aa34.35■■■■□ 3.09
COL9A2-203ENST00000417105 A2ML1A8K2U0 1454 aa34.34■■■■□ 3.09
COL9A2-203ENST00000417105 RRP7BPQ9NSQ0 103 aa34.34■■■■□ 3.09
COL9A2-203ENST00000417105 DNMT1P26358 1616 aaKnown RBP34.32■■■■□ 3.08
COL9A2-203ENST00000417105 ABCC3O15438 1527 aa34.31■■■■□ 3.08
COL9A2-203ENST00000417105 PLA2R1Q13018 1463 aa34.31■■■■□ 3.08
COL9A2-203ENST00000417105 MROH1Q8NDA8 1641 aa34.29■■■■□ 3.08
COL9A2-203ENST00000417105 CHIC2Q9UKJ5 165 aa34.28■■■■□ 3.08
COL9A2-203ENST00000417105 PKD2Q13563 968 aa34.27■■■■□ 3.08
COL9A2-203ENST00000417105 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
COL9A2-203ENST00000417105 ERBINQ96RT1 1412 aa34.24■■■■□ 3.07
COL9A2-203ENST00000417105 FAM50AQ14320 339 aaKnown RBP34.23■■■■□ 3.07
COL9A2-203ENST00000417105 ANKRD30AQ9BXX3 1397 aa34.21■■■■□ 3.07
COL9A2-203ENST00000417105 CEP152O94986 1710 aa34.2■■■■□ 3.07
COL9A2-203ENST00000417105 LTBP4Q8N2S1 1624 aa34.19■■■■□ 3.06
COL9A2-203ENST00000417105 NLRP1Q9C000 1473 aa34.18■■■■□ 3.06
COL9A2-203ENST00000417105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.17■■■■□ 3.061e-6■■□□□ 13.3
COL9A2-203ENST00000417105 PRDM15P57071 1507 aaPredicted RBP34.15■■■■□ 3.06
COL9A2-203ENST00000417105 ERVK-7P63135 1459 aa34.15■■■■□ 3.06
COL9A2-203ENST00000417105 SPATA31D1Q6ZQQ2 1576 aa34.15■■■■□ 3.06
COL9A2-203ENST00000417105 ZNF335Q9H4Z2 1342 aaPredicted RBP34.13■■■■□ 3.05
COL9A2-203ENST00000417105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.12■■■■□ 3.05
COL9A2-203ENST00000417105 UGGT1Q9NYU2 1555 aa34.12■■■■□ 3.05
COL9A2-203ENST00000417105 THEMISQ8N1K5 641 aaPredicted RBP34.12■■■■□ 3.05
COL9A2-203ENST00000417105 DEPDC5O75140 1603 aa34.08■■■■□ 3.05
COL9A2-203ENST00000417105 ADGRL2O95490 1459 aa34.08■■■■□ 3.05
COL9A2-203ENST00000417105 KANK1Q14678 1352 aa34.07■■■■□ 3.04
COL9A2-203ENST00000417105 CFAP65Q6ZU64 1925 aaKnown RBP34.06■■■■□ 3.04
COL9A2-203ENST00000417105 ANKLE2Q86XL3 938 aa34.06■■■■□ 3.04
COL9A2-203ENST00000417105 POLR1AO95602 1720 aaPredicted RBP34.06■■■■□ 3.04
COL9A2-203ENST00000417105 PPARGC1BQ86YN6 1023 aaKnown RBP34.05■■■■□ 3.04
COL9A2-203ENST00000417105 NEURL4Q96JN8 1562 aa34.05■■■■□ 3.04
COL9A2-203ENST00000417105 ARHGAP31Q2M1Z3 1444 aa34.04■■■■□ 3.04
COL9A2-203ENST00000417105 IQSEC2Q5JU85 1478 aa33.99■■■■□ 3.03
COL9A2-203ENST00000417105 VWDEQ8N2E2 1590 aa33.97■■■■□ 3.03
COL9A2-203ENST00000417105 ANKRD50Q9ULJ7 1429 aa33.96■■■■□ 3.03
COL9A2-203ENST00000417105 LMTK2Q8IWU2 1503 aa33.95■■■■□ 3.03
COL9A2-203ENST00000417105 NPHP4O75161 1426 aaPredicted RBP33.94■■■■□ 3.02
COL9A2-203ENST00000417105 MED14O60244 1454 aa33.92■■■■□ 3.02
COL9A2-203ENST00000417105 UBR1Q8IWV7 1749 aa33.91■■■■□ 3.02
COL9A2-203ENST00000417105 ITGAEP38570 1179 aa33.87■■■■□ 3.01
COL9A2-203ENST00000417105 EFCAB6Q5THR3 1501 aa33.86■■■■□ 3.01
COL9A2-203ENST00000417105 IQGAP1P46940 1657 aa33.84■■■■□ 3.01
COL9A2-203ENST00000417105 PIK3C2BO00750 1634 aa33.83■■■■□ 3.01
COL9A2-203ENST00000417105 ROCK1Q13464 1354 aa33.83■■■■□ 3.01
COL9A2-203ENST00000417105 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
COL9A2-203ENST00000417105 STAG3Q9UJ98 1225 aa33.81■■■■□ 3
COL9A2-203ENST00000417105 LTKP29376 864 aa33.8■■■■□ 3
COL9A2-203ENST00000417105 IDI1Q13907 227 aa33.8■■■■□ 3
COL9A2-203ENST00000417105 SCAF11Q99590 1463 aaKnown RBP33.8■■■■□ 3
COL9A2-203ENST00000417105 ARHGAP23Q9P227 1491 aa33.8■■■■□ 3
COL9A2-203ENST00000417105 SYNMO15061 1565 aa33.8■■■■□ 3
COL9A2-203ENST00000417105 NOS1P29475 1434 aa33.79■■■■□ 3
COL9A2-203ENST00000417105 SLIT1O75093 1534 aa33.79■■■■□ 3
COL9A2-203ENST00000417105 CPS1P31327 1500 aa33.79■■■■□ 3
COL9A2-203ENST00000417105 TXNDC2Q86VQ3 553 aa33.79■■■■□ 3
COL9A2-203ENST00000417105 EID1Q9Y6B2 187 aa33.75■■■□□ 2.99
COL9A2-203ENST00000417105 UNC13BO14795 1591 aa33.74■■■□□ 2.99
COL9A2-203ENST00000417105 TMEM2Q9UHN6 1383 aa33.73■■■□□ 2.99
COL9A2-203ENST00000417105 TET3O43151 1660 aa33.72■■■□□ 2.99
COL9A2-203ENST00000417105 RPRD2Q5VT52 1461 aaKnown RBP33.72■■■□□ 2.99
COL9A2-203ENST00000417105 SLC52A1Q9NWF4 448 aa33.69■■■□□ 2.98
COL9A2-203ENST00000417105 KDM5AP29375 1690 aaKnown RBP33.68■■■□□ 2.98
COL9A2-203ENST00000417105 ADGRB3O60242 1522 aa33.66■■■□□ 2.98
COL9A2-203ENST00000417105 GCC2Q8IWJ2 1684 aa33.65■■■□□ 2.98
COL9A2-203ENST00000417105 STRCP1A6NGW2 1772 aa33.65■■■□□ 2.98
COL9A2-203ENST00000417105 RRBP1Q9P2E9 1410 aaKnown RBP33.63■■■□□ 2.97
COL9A2-203ENST00000417105 NUP155O75694 1391 aa33.62■■■□□ 2.97
COL9A2-203ENST00000417105 SCAF1Q9H7N4 1312 aaKnown RBP33.61■■■□□ 2.97
COL9A2-203ENST00000417105 IQGAP3Q86VI3 1631 aa33.61■■■□□ 2.97
COL9A2-203ENST00000417105 TOM1O60784 492 aa33.6■■■□□ 2.97
COL9A2-203ENST00000417105 PIP4K2BP78356 416 aa33.59■■■□□ 2.97
COL9A2-203ENST00000417105 LRRC7Q96NW7 1537 aa33.58■■■□□ 2.97
COL9A2-203ENST00000417105 E9PCH4 1651 aa33.58■■■□□ 2.97
COL9A2-203ENST00000417105 CHGAP10645 457 aaKnown RBP33.52■■■□□ 2.96
COL9A2-203ENST00000417105 SLC26A8Q96RN1 970 aa33.52■■■□□ 2.96
COL9A2-203ENST00000417105 SENP3Q9H4L4 574 aaPredicted RBP33.5■■■□□ 2.95
COL9A2-203ENST00000417105 DISP3Q9P2K9 1392 aa33.49■■■□□ 2.95
COL9A2-203ENST00000417105 MYO5BQ9ULV0 1848 aa33.49■■■□□ 2.95
COL9A2-203ENST00000417105 BCANQ96GW7 911 aa33.49■■■□□ 2.95
COL9A2-203ENST00000417105 TMEM131LA2VDJ0 1609 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms