RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
PAF1-202ENST00000416728 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
PAF1-202ENST00000416728 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
PAF1-202ENST00000416728 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
PAF1-202ENST00000416728 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
PAF1-202ENST00000416728 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
PAF1-202ENST00000416728 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
PAF1-202ENST00000416728 TNRQ92752 1358 aa22.79■■□□□ 1.24
PAF1-202ENST00000416728 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
PAF1-202ENST00000416728 PZPP20742 1482 aa22.78■■□□□ 1.24
PAF1-202ENST00000416728 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
PAF1-202ENST00000416728 MYOM3Q5VTT5 1437 aa22.77■■□□□ 1.24
PAF1-202ENST00000416728 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
PAF1-202ENST00000416728 ZNF335Q9H4Z2 1342 aaPredicted RBP22.76■■□□□ 1.23
PAF1-202ENST00000416728 DNMT1P26358 1616 aaKnown RBP22.74■■□□□ 1.23
PAF1-202ENST00000416728 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
PAF1-202ENST00000416728 APLP2Q06481 763 aa22.7■■□□□ 1.22
PAF1-202ENST00000416728 NLRP1Q9C000 1473 aa22.68■■□□□ 1.22
PAF1-202ENST00000416728 RNF17Q9BXT8 1623 aaKnown RBP22.67■■□□□ 1.22
PAF1-202ENST00000416728 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
PAF1-202ENST00000416728 ABCC3O15438 1527 aa22.65■■□□□ 1.22
PAF1-202ENST00000416728 EIF2AK4Q9P2K8 1649 aaKnown RBP22.65■■□□□ 1.22
PAF1-202ENST00000416728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.21
PAF1-202ENST00000416728 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
PAF1-202ENST00000416728 UBAP1LF5GYI3 381 aa22.63■■□□□ 1.21
PAF1-202ENST00000416728 UGGT1Q9NYU2 1555 aa22.62■■□□□ 1.21
PAF1-202ENST00000416728 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
PAF1-202ENST00000416728 ZC3H13Q5T200 1668 aaKnown RBP22.62■■□□□ 1.21
PAF1-202ENST00000416728 DISP3Q9P2K9 1392 aa22.61■■□□□ 1.21
PAF1-202ENST00000416728 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
PAF1-202ENST00000416728 KIF15Q9NS87 1388 aa22.61■■□□□ 1.21
PAF1-202ENST00000416728 ABCC5O15440 1437 aa22.6■■□□□ 1.21
PAF1-202ENST00000416728 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
PAF1-202ENST00000416728 MROH1Q8NDA8 1641 aa22.59■■□□□ 1.21
PAF1-202ENST00000416728 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
PAF1-202ENST00000416728 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
PAF1-202ENST00000416728 ERVK-7P63135 1459 aa22.58■■□□□ 1.21
PAF1-202ENST00000416728 PTPN23Q9H3S7 1636 aa22.58■■□□□ 1.2
PAF1-202ENST00000416728 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
PAF1-202ENST00000416728 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
PAF1-202ENST00000416728 FGD6Q6ZV73 1430 aa22.56■■□□□ 1.2
PAF1-202ENST00000416728 ERBINQ96RT1 1412 aa22.56■■□□□ 1.2
PAF1-202ENST00000416728 DAPK1P53355 1430 aa22.55■■□□□ 1.2
PAF1-202ENST00000416728 CPS1P31327 1500 aa22.54■■□□□ 1.2
PAF1-202ENST00000416728 MED14O60244 1454 aa22.54■■□□□ 1.2
PAF1-202ENST00000416728 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
PAF1-202ENST00000416728 DEPDC5O75140 1603 aa22.53■■□□□ 1.2
PAF1-202ENST00000416728 PRDM15P57071 1507 aaPredicted RBP22.52■■□□□ 1.2
PAF1-202ENST00000416728 CEP152O94986 1710 aa22.51■■□□□ 1.19
PAF1-202ENST00000416728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.5■■□□□ 1.194e-9■■■■■ 29.1
PAF1-202ENST00000416728 ARHGAP31Q2M1Z3 1444 aa22.5■■□□□ 1.19
PAF1-202ENST00000416728 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
PAF1-202ENST00000416728 VWDEQ8N2E2 1590 aa22.48■■□□□ 1.19
PAF1-202ENST00000416728 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
PAF1-202ENST00000416728 KANK1Q14678 1352 aa22.48■■□□□ 1.19
PAF1-202ENST00000416728 TOM1O60784 492 aa22.47■■□□□ 1.19
PAF1-202ENST00000416728 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
PAF1-202ENST00000416728 ILDR2Q71H61 639 aa22.46■■□□□ 1.19
PAF1-202ENST00000416728 IQGAP1P46940 1657 aa22.45■■□□□ 1.18
PAF1-202ENST00000416728 PIP4K2BP78356 416 aa22.44■■□□□ 1.18
PAF1-202ENST00000416728 SCAF11Q99590 1463 aaKnown RBP22.43■■□□□ 1.18
PAF1-202ENST00000416728 UBR1Q8IWV7 1749 aa22.42■■□□□ 1.18
PAF1-202ENST00000416728 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
PAF1-202ENST00000416728 TXNDC2Q86VQ3 553 aa22.4■■□□□ 1.18
PAF1-202ENST00000416728 ARHGAP23Q9P227 1491 aa22.4■■□□□ 1.18
PAF1-202ENST00000416728 CFAP65Q6ZU64 1925 aaKnown RBP22.39■■□□□ 1.17
PAF1-202ENST00000416728 LTKP29376 864 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 EID1Q9Y6B2 187 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 SLIT1O75093 1534 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 LMTK2Q8IWU2 1503 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 HSPA1LP34931 641 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 STAG3Q9UJ98 1225 aa22.38■■□□□ 1.17
PAF1-202ENST00000416728 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
PAF1-202ENST00000416728 LRRC7Q96NW7 1537 aa22.35■■□□□ 1.17
PAF1-202ENST00000416728 TMEM2Q9UHN6 1383 aa22.34■■□□□ 1.17
PAF1-202ENST00000416728 SOCS7O14512 581 aa22.34■■□□□ 1.17
PAF1-202ENST00000416728 IDI1Q13907 227 aa22.33■■□□□ 1.17
PAF1-202ENST00000416728 PIK3C2BO00750 1634 aa22.33■■□□□ 1.16
PAF1-202ENST00000416728 SYNMO15061 1565 aa22.32■■□□□ 1.16
PAF1-202ENST00000416728 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
PAF1-202ENST00000416728 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
PAF1-202ENST00000416728 STRCP1A6NGW2 1772 aa22.31■■□□□ 1.16
PAF1-202ENST00000416728 NOS1P29475 1434 aa22.3■■□□□ 1.16
PAF1-202ENST00000416728 ALKQ9UM73 1620 aa22.29■■□□□ 1.16
PAF1-202ENST00000416728 SLC52A1Q9NWF4 448 aa22.26■■□□□ 1.15
PAF1-202ENST00000416728 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
PAF1-202ENST00000416728 RPRD2Q5VT52 1461 aaKnown RBP22.24■■□□□ 1.15
PAF1-202ENST00000416728 ADGRB3O60242 1522 aa22.23■■□□□ 1.15
PAF1-202ENST00000416728 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
PAF1-202ENST00000416728 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
PAF1-202ENST00000416728 SLC26A8Q96RN1 970 aa22.2■■□□□ 1.14
PAF1-202ENST00000416728 ROCK1Q13464 1354 aa22.18■■□□□ 1.14
PAF1-202ENST00000416728 KCNA6P17658 529 aa22.18■■□□□ 1.14
PAF1-202ENST00000416728 BCANQ96GW7 911 aa22.17■■□□□ 1.14
PAF1-202ENST00000416728 TET3O43151 1660 aa22.17■■□□□ 1.14
PAF1-202ENST00000416728 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
PAF1-202ENST00000416728 UNC13BO14795 1591 aa22.14■■□□□ 1.14
PAF1-202ENST00000416728 PPP1R15AO75807 674 aaPredicted RBP22.12■■□□□ 1.13
PAF1-202ENST00000416728 ITGAEP38570 1179 aa22.12■■□□□ 1.13
PAF1-202ENST00000416728 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms