RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 BRPF3Q9ULD4 1205 aa4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 MINK1Q8N4C8 1332 aaPredicted RBP4.41□□□□□ -1.7
CTDSPL-203ENST00000416688 UNCXA6NJT0 531 aa4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 HMGB1P1B2RPK0 211 aaPredicted RBP4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 AMHR2Q16671 573 aa4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 C8orf37Q96NL8 207 aa4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 MYH16Q9H6N6 1097 aa4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 IVNS1ABPQ9Y6Y0 642 aa4.4□□□□□ -1.71
CTDSPL-203ENST00000416688 GALR2O43603 387 aaPredicted RBP4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 SF3A1Q15459 793 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 UBXN4Q92575 508 aa4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 PBXIP1Q96AQ6 731 aa4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 MRRFQ96E11 262 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 POM121Q96HA1 1249 aa4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 CALR3Q96L12 384 aaKnown RBP4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 PHF12Q96QT6 1004 aa4.39□□□□□ -1.71
CTDSPL-203ENST00000416688 SPDYE5A6NIY4 337 aa4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 TCF3P15923 654 aa4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 PTMSP20962 102 aa4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 PARP9Q8IXQ6 854 aa4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 HIRIP3Q9BW71 556 aaPredicted RBP4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 ZC3H4Q9UPT8 1303 aaKnown RBP4.38□□□□□ -1.71
CTDSPL-203ENST00000416688 NUBP1P53384 320 aa4.37□□□□□ -1.71
CTDSPL-203ENST00000416688 GORABQ5T7V8 394 aa4.37□□□□□ -1.71
CTDSPL-203ENST00000416688 EXOC8Q8IYI6 725 aa4.37□□□□□ -1.71
CTDSPL-203ENST00000416688 PRDM16Q9HAZ2 1276 aa4.37□□□□□ -1.71
CTDSPL-203ENST00000416688 RIPOR2Q9Y4F9 1068 aa4.37□□□□□ -1.71
CTDSPL-203ENST00000416688 LOC102724159A0A0B4J2E5 919 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 MARCH6O60337 910 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 MAP2K5Q13163 448 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 TTLL12Q14166 644 aaPredicted RBP4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 PWP2Q15269 919 aaKnown RBP4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 SH3D19Q5HYK7 790 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 ATP1B4Q9UN42 357 aaPredicted RBP4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 COG6Q9Y2V7 657 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 CCDC61Q9Y6R9 512 aa4.36□□□□□ -1.71
CTDSPL-203ENST00000416688 IRF6O14896 467 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 PAK3O75914 559 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 PDE4AP27815 886 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 ZC3H6P61129 1189 aaKnown RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 HSP90AB4PQ58FF6 505 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 LHX8Q68G74 356 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 B4GALNT3Q6L9W6 998 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 TMED8Q6PL24 325 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 TEX2Q8IWB9 1127 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 RASEFQ8IZ41 740 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 CCER1Q8TC90 406 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 CCDC102AQ96A19 550 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 SIRT1Q96EB6 747 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 PRM3Q9NNZ6 103 aa4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 KIAA1522Q9P206 1035 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 PPP1R1BQ9UD71 204 aaPredicted RBP4.35□□□□□ -1.71
CTDSPL-203ENST00000416688 TBC1D12O60347 775 aa4.34□□□□□ -1.71
CTDSPL-203ENST00000416688 DCBLD2Q96PD2 775 aa4.34□□□□□ -1.71
CTDSPL-203ENST00000416688 SOX12O15370 315 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 MAFGO15525 162 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 MLLT3P42568 568 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 FGD1P98174 961 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 SKIV2LQ15477 1246 aaKnown RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 BANK1Q8NDB2 785 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 MS4A3Q96HJ5 214 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 PLCD4Q9BRC7 762 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 LARP6Q9BRS8 491 aaKnown RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 TSPYL2Q9H2G4 693 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 VRTNQ9H8Y1 702 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 METTL14Q9HCE5 456 aaKnown RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 GNEQ9Y223 722 aaKnown RBP4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 PPME1Q9Y570 386 aa4.33□□□□□ -1.72
CTDSPL-203ENST00000416688 TPD52L2O43399 206 aaKnown RBP4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 RTL5Q5HYW3 569 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 GLMNQ92990 594 aa4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 KIF12Q96FN5 646 aa4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 PKNOX2Q96KN3 472 aa4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 NAP1L5Q96NT1 182 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL-203ENST00000416688 ZNF16P17020 682 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 ASTLQ6HA08 431 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 TXNDC2Q86VQ3 553 aa4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 MICAL1Q8TDZ2 1067 aa4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 DDX27Q96GQ7 796 aaKnown RBP4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 BCL2L13Q9BXK5 485 aa4.31□□□□□ -1.72
CTDSPL-203ENST00000416688 A0A0U1RQG5 324 aaPredicted RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 POTEB2H3BUK9 544 aa4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 ANAPC15P60006 121 aa4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 IRX6P78412 446 aaPredicted RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 CAMK2BQ13554 666 aa4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 MFSD10Q14728 455 aa4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 GIGYF2Q6Y7W6 1299 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 NOP9Q86U38 636 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 RBM27Q9P2N5 1060 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 MAGEC2Q9UBF1 373 aaPredicted RBP4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 TRPC6Q9Y210 931 aa4.3□□□□□ -1.72
CTDSPL-203ENST00000416688 SPDYE16A6NNV3 312 aaPredicted RBP4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 MAP3K13O43283 966 aa4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 ATMINO43313 823 aaPredicted RBP4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 VAMP1P23763 118 aa4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 MCCD1P59942 119 aaPredicted RBP4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 NAALADL2Q58DX5 795 aa4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 ZNF467Q7Z7K2 595 aaPredicted RBP4.29□□□□□ -1.72
CTDSPL-203ENST00000416688 MORC4Q8TE76 937 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms